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Microbiology Research, Volume 12, Issue 1

March 2021 - 17 articles

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Articles (17)

  • Review
  • Open Access
24 Citations
7,246 Views
24 Pages

Listeriosis is a severe food borne disease with a mortality rate of up to 30% caused by pathogenic Listeria monocytogenes via the production of several virulence factors including listeriolysin O (LLO), transcriptional activator (PrfA), actin (Act),...

  • Protocol
  • Open Access
2 Citations
2,329 Views
8 Pages

Protocol for the pBDG2 Study: Prospective Evaluation of 1.3-β-D-Glucan in the Peritoneal Fluid for the Diagnosis of Intra-Abdominal Candidiasis in Critically Ill Patients

  • Emmanuel Novy,
  • François-Xavier Laithier,
  • Jeremie Riviere,
  • Thomas Remen,
  • Marie-Reine Losser,
  • Philippe Guerci and
  • Marie Machouart

Background: The delayed diagnosis of the presence of Candida in severe intra-abdominal infections exposes patients to an increased risk of mortality. The prevalence of intra-abdominal candidiasis (IAC) varies with the type of intra-abdominal infectio...

  • Article
  • Open Access
3 Citations
3,467 Views
30 Pages

In-Silico Pangenomics of SARS-CoV-2 Isolates Reveal Evidence for Subtle Adaptive Expression Strategies, Continued Clonal Evolution, and Sub-Clonal Emergences, Despite Genome Stability

  • Kamaleldin B. Said,
  • Ahmed Alsolami,
  • Anas Fathuldeen,
  • Fawwaz Alshammari,
  • Walid Alhiraabi,
  • Salem Alaamer,
  • Hamad Alrmaly,
  • Fahad Aldamadi,
  • Dakheel F. Aldakheel and
  • Safia Moussa
  • + 2 authors

The devastating SARS-CoV2 pandemic is worsening with relapsing surges, emerging mutants, and increasing mortalities. Despite enormous efforts, it is not clear how SARS-CoV2 adapts and evolves in a clonal background. Laboratory research is hindered by...

  • Article
  • Open Access
4 Citations
2,864 Views
10 Pages

Small Noncoding RNAs MTS0997 and MTS1338 Affect the Adaptation and Virulence of Mycobacterium tuberculosis

  • Galina Shepelkova,
  • Vladimir Evstifeev,
  • Mikhail Averbakch Jr.,
  • Ilya Sivokozov,
  • Atadzhan Ergeshov,
  • Tatyana Azhikina and
  • Vladimir Yeremeev

Tuberculosis (TB) is currently the leading cause of death among bacterial infectious diseases. The spectrum of disease manifestations depends on both host immune responses and the ability of Mycobacterium tuberculosis to resist it. Small non-coding R...

  • Review
  • Open Access
2 Citations
4,623 Views
13 Pages

Looking for Solutions to the Pitfalls of Developing Novel Antibacterials in an Economically Challenging System

  • Gilles Courtemanche,
  • Rohini Wadanamby,
  • Amritanjali Kiran,
  • Luisa Fernanda Toro-Alzate,
  • Mathew Diggle,
  • Dipanjan Chakraborty,
  • Ariel Blocker and
  • Maarten van Dongen

The increase in antibacterial resistance (ABR) currently equates in the minds of many with the distant fear that certain antibiotics will not work in 30 years on certain bacteria found in places the majority of us never go to. However, in reality, ri...

  • Article
  • Open Access
4 Citations
3,144 Views
7 Pages

Epstein–Barr Virus (EBV) Viral Load in Tumor Cells Did Not Predict Tumor Extensiveness in Nasopharyngeal Cancer

  • Soehartati A. Gondhowiardjo,
  • Handoko,
  • Marlinda Adham,
  • Lisnawati Rachmadi,
  • Henry Kodrat,
  • Demak Lumban Tobing,
  • I Made Haryoga,
  • Agustinus Gatot Dwiyono,
  • Yoseph Adi Kristian and
  • Tiara Bunga Mayang Permata
  • + 1 author

Background: Nasopharyngeal cancer is commonly associated with Epstein–Barr virus (EBV) infection, especially undifferentiated non-keratinized histology. EBV DNA quantification through nasopharyngeal brushing was previously reported to be not related...

  • Article
  • Open Access
13 Citations
3,324 Views
16 Pages

Our understanding on the effects of tillage intensity on the soil microbial community structure and composition in crop production systems are limited. This study evaluated the soil microbial community composition and diversity under different tillag...

  • Feature Paper
  • Article
  • Open Access
9,794 Views
12 Pages

Genomic Characterization and Phylogenetic Analysis of SARS-CoV-2 in Libya

  • Silvia Fillo,
  • Francesco Giordani,
  • Anella Monte,
  • Giovanni Faggioni,
  • Riccardo De Santis,
  • Nino D’Amore,
  • Stefano Palomba,
  • Taher Hamdani,
  • Kamel Taloa and
  • Atef Belkhir Jumaa
  • + 8 authors

The COVID-19 epidemic started in Libya in March 2020 and rapidly spread. To shed some light on the severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) strains circulating in Libya, viruses isolated from 10 patients in this country were seque...

  • Brief Report
  • Open Access
8 Citations
4,402 Views
15 Pages

Multidrug Resistance Dissemination in Escherichia coli Isolated from Wild Animals: Bacterial Clones and Plasmid Complicity

  • Carolina Sabença,
  • Gilberto Igrejas,
  • Patrícia Poeta,
  • Frédéric Robin,
  • Richard Bonnet and
  • Racha Beyrouthy

Objectives. Epidemiological data concerning third-generation cephalosporin (3GC) resistance in wild fauna are scarce. The aim of this study was to characterize the resistance genes, their genetic context, and clonal relatedness in 17 Escherichia coli...

  • Article
  • Open Access
5 Citations
4,618 Views
41 Pages

Elucidating the Relations between Gut Bacterial Composition and the Plasma and Fecal Metabolomes of Antibiotic Treated Wistar Rats

  • Aishwarya Murali,
  • Varun Giri,
  • Hunter James Cameron,
  • Christina Behr,
  • Saskia Sperber,
  • Hennicke Kamp,
  • Tilmann Walk and
  • Bennard van Ravenzwaay

The gut microbiome is vital to the health and development of an organism, specifically in determining the host response to a chemical (drug) administration. To understand this, we investigated the effects of six antibiotic (AB) treatments (Streptomyc...

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Microbiol. Res. - ISSN 2036-7481Creative Common CC BY license