Nanoparticles in 472 Human Cerebrospinal Fluid: Changes in Extracellular Vesicle Concentration and miR-21 Expression as a Biomarker for Leptomeningeal Metastasis
Abstract
:Simple Summary
Abstract
1. Introduction
2. Results
2.1. Patient Characteristics
2.2. Nano-Sized Particle Peaks in CSF Observed by Dynamic Light Scattering (DLS)
2.3. Verification of Exosomes in CSF
2.4. Differences in EV Concentration and Size in CSF Measured by Nanoparticle Tracking Analysis (NTA)
2.5. Verification of Non-Vesicular Particles among NTA Measured EV in CSF
2.6. Change in EV Concentration in LM Patients after Intraventricular Chemotherapy
2.7. Analysis of Exosome Surface Markers among NTA Measured EV in Patients with LM Receiving Intraventricular Chemotherapy
2.8. Change in miRNA Expression in Patients with LM Receiving Intraventricular Chemotherapy
3. Discussion
3.1. Nanoparticles in CSF
3.2. Differences in EV Concentration in CSF among Patient Groups by NTA
3.3. Change in EV Concentration and miR-21 Expression in LM Patients after Intra-CSF Chemotherapy
4. Materials and Methods
4.1. Patients and Control Groups
4.2. CSF Preparation and Selection for Nanoparticle Measurement
4.3. Measurement of Nanoparticles by Dynamic Light Scattering (DLS)
4.4. Quantitative Measurement of Nanoparticles by Nanoparticle Tracking Analysis (NTA)
4.5. CSF Concentration and Western Blotting
4.6. Intact Exosome Isolation for Transmission Electron Microscopy
4.7. Quantitative Measurement of Extracellular Vesicles (EVs)
4.7.1. MACSPlex
4.7.2. Exoview
4.8. Extracellular RNA Extraction from CSF
4.9. miRNA Digital Droplet Polymerase Chain Reaction (ddPCR)
4.10. Statistical Analysis
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Acknowledgments
Conflicts of Interest
Abbreviations
EVs | extracellular vesicles |
LM | leptomeningeal metastasis |
DLS | Dynamic Light Scattering |
NTA | Nanoparticle Tracking Analysis |
CSF | cerebrospinal fluid |
CNS | central nervous system |
MFI | fluorescence intensity |
ddPCR | digital droplet polymerase chain reaction |
NSCLC | non-small cell lung cancer |
PSD | particle size distribution |
SD | standard deviation |
VLP | ventriculolumbar perfusion |
ANOVA | analysis of variance |
CI | confidence interval |
OS | overall survival |
References
- Debus, O.M.; Lerchl, A.; Bothe, H.W.; Bremer, J.; Fiedler, B.; Franssen, M.; Koehring, J.; Steils, M.; Kurlemann, G. Spontaneous central melatonin secretion and resorption kinetics of exogenous melatonin: A ventricular CSF study. J. Pineal Res. 2002, 33, 213–217. [Google Scholar] [CrossRef] [PubMed]
- Frankfort, S.V.; Tulner, L.R.; van Campen, J.P.; Verbeek, M.M.; Jansen, R.W.; Beijnen, J.H. Amyloid beta protein and tau in cerebrospinal fluid and plasma as biomarkers for dementia: A review of recent literature. Curr. Clin. Pharmacol. 2008, 3, 123–131. [Google Scholar] [CrossRef] [PubMed]
- Romeo, M.J.; Espina, V.; Lowenthal, M.; Espina, B.H.; Petricoin, E.F., 3rd; Liotta, L.A. CSF proteome: A protein repository for potential biomarker identification. Expert Rev. Proteom. 2005, 2, 57–70. [Google Scholar]
- Hyun, J.W.; Park, J.H.; Kang, B.G.; Park, E.Y.; Park, B.; Joo, J.; Kim, J.K.; Kim, S.H.; Jeong, J.H.; Lee, H.W.; et al. Diagnostic and prognostic values of cerebrospinal fluid CYFRA 21-1 in patients with leptomeningeal carcinomatosis. Oncotarget 2017, 8, 53326–53335. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Gyorgy, B.; Szabo, T.G.; Pasztoi, M.; Pal, Z.; Misjak, P.; Aradi, B.; Laszlo, V.; Pallinger, E.; Pap, E.; Kittel, A.; et al. Membrane vesicles, current state-of-the-art: Emerging role of extracellular vesicles. Cell. Mol. Life Sci. 2011, 68, 2667–2688. [Google Scholar]
- Gonda, D.D.; Akers, J.C.; Kim, R.; Kalkanis, S.N.; Hochberg, F.H.; Chen, C.C.; Carter, B.S. Neuro-oncologic applications of exosomes, microvesicles, and other nano-sized extracellular particles. Neurosurgery 2013, 72, 501–510. [Google Scholar] [CrossRef] [Green Version]
- Harrington, M.G.; Fonteh, A.N.; Oborina, E.; Liao, P.; Cowan, R.P.; McComb, G.; Chavez, J.N.; Rush, J.; Biringer, R.G.; Huhmer, A.F. The morphology and biochemistry of nanostructures provide evidence for synthesis and signaling functions in human cerebrospinal fluid. Cereb. Fluid Res. 2009, 6, 10. [Google Scholar]
- Street, J.M.; Barran, P.E.; Mackay, C.L.; Weidt, S.; Balmforth, C.; Walsh, T.S.; Chalmers, R.T.; Webb, D.J.; Dear, J.W. Identification and proteomic profiling of exosomes in human cerebrospinal fluid. J. Transl. Med. 2012, 10, 5. [Google Scholar] [CrossRef] [Green Version]
- Teplyuk, N.M.; Mollenhauer, B.; Gabriely, G.; Giese, A.; Kim, E.; Smolsky, M.; Kim, R.Y.; Saria, M.G.; Pastorino, S.; Kesari, S.; et al. MicroRNAs in cerebrospinal fluid identify glioblastoma and metastatic brain cancers and reflect disease activity. Neuro Oncol. 2012, 14, 689–700. [Google Scholar]
- Akers, J.C.; Ramakrishnan, V.; Nolan, J.P.; Duggan, E.; Fu, C.C.; Hochberg, F.H.; Chen, C.C.; Carter, B.S. Comparative Analysis of Technologies for Quantifying Extracellular Vesicles (EVs) in Clinical Cerebrospinal Fluids (CSF). PLoS ONE 2016, 11, e0149866. [Google Scholar] [CrossRef]
- Burgos, K.L.; Javaherian, A.; Bomprezzi, R.; Ghaffari, L.; Rhodes, S.; Courtright, A.; Tembe, W.; Kim, S.; Metpally, R.; Van Keuren-Jensen, K. Identification of extracellular miRNA in human cerebrospinal fluid by next-generation sequencing. RNA 2013, 19, 712–722. [Google Scholar] [CrossRef] [Green Version]
- Yagi, Y.; Ohkubo, T.; Kawaji, H.; Machida, A.; Miyata, H.; Goda, S.; Roy, S.; Hayashizaki, Y.; Suzuki, H.; Yokota, T. Next-generation sequencing-based small RNA profiling of cerebrospinal fluid exosomes. Neurosci. Lett. 2017, 636, 48–57. [Google Scholar]
- Chamberlain, M.C. Leptomeningeal metastases: A review of evaluation and treatment. J. Neurooncol. 1998, 37, 271–284. [Google Scholar] [PubMed]
- Boogerd, W.; van den Bent, M.J.; Koehler, P.J.; Heimans, J.J.; van der Sande, J.J.; Aaronson, N.K.; Hart, A.A.; Benraadt, J.; Vecht Ch, J. The relevance of intraventricular chemotherapy for leptomeningeal metastasis in breast cancer: A randomised study. Eur. J. Cancer 2004, 40, 2726–2733. [Google Scholar] [CrossRef] [PubMed]
- Oechsle, K.; Lange-Brock, V.; Kruell, A.; Bokemeyer, C.; de Wit, M. Prognostic factors and treatment options in patients with leptomeningeal metastases of different primary tumors: A retrospective analysis. J. Cancer Res. Clin. Oncol. 2010, 136, 1729–1735. [Google Scholar] [CrossRef] [PubMed]
- Lee, S.J.; Lee, J.I.; Nam, D.H.; Ahn, Y.C.; Han, J.H.; Sun, J.M.; Ahn, J.S.; Park, K.; Ahn, M.J. Leptomeningeal carcinomatosis in non-small-cell lung cancer patients: Impact on survival and correlated prognostic factors. J. Thorac. Oncol. 2013, 8, 185–191. [Google Scholar] [CrossRef] [Green Version]
- Freilich, R.J.; Krol, G.; DeAngelis, L.M. Neuroimaging and cerebrospinal fluid cytology in the diagnosis of leptomeningeal metastasis. Ann. Neurol. 1995, 38, 51–57. [Google Scholar] [CrossRef]
- Glantz, M.J.; Cole, B.F.; Glantz, L.K.; Cobb, J.; Mills, P.; Lekos, A.; Walters, B.C.; Recht, L.D. Cerebrospinal fluid cytology in patients with cancer: Minimizing false-negative results. Cancer 1998, 82, 733–739. [Google Scholar] [CrossRef]
- Chamberlain, M.; Junck, L.; Brandsma, D.; Soffietti, R.; Ruda, R.; Raizer, J.; Boogerd, W.; Taillibert, S.; Groves, M.D.; Le Rhun, E.; et al. Leptomeningeal metastases: A RANO proposal for response criteria. Neuro Oncol. 2017, 19, 484–492. [Google Scholar]
- Chamberlain, M.C. Cytologically negative carcinomatous meningitis: Usefulness of CSF biochemical markers. Neurology 1998, 50, 1173–1175. [Google Scholar] [CrossRef]
- Chamberlain, M.C.; Kormanik, P. Carcinoma meningitis secondary to non-small cell lung cancer: Combined modality therapy. Arch. Neurol. 1998, 55, 506–512. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Gwak, H.S.; Joo, J.; Kim, S.; Yoo, H.; Shin, S.H.; Han, J.Y.; Kim, H.T.; Lee, J.S.; Lee, S.H. Analysis of treatment outcomes of intraventricular chemotherapy in 105 patients for leptomeningeal carcinomatosis from non-small-cell lung cancer. J. Thorac. Oncol. 2013, 8, 599–605. [Google Scholar] [CrossRef] [Green Version]
- Shim, Y.; Gwak, H.S.; Kim, S.; Joo, J.; Shin, S.H.; Yoo, H. Retrospective Analysis of Cerebrospinal Fluid Profiles in 228 Patients with Leptomeningeal Carcinomatosis: Differences According to the Sampling Site, Symptoms, and Systemic Factors. J. Korean Neurosurg. Soc. 2016, 59, 570–576. [Google Scholar] [CrossRef]
- Gwak, H.S.; Joo, J.; Shin, S.H.; Yoo, H.; Han, J.Y.; Kim, H.T.; Yun, T.; Ro, J.; Lee, J.S.; Lee, S.H. Ventriculolumbar perfusion chemotherapy with methotrexate for treating leptomeningeal carcinomatosis: A Phase II Study. Oncologist 2014, 19, 1044–1045. [Google Scholar] [CrossRef] [Green Version]
- Gui, Y.; Liu, H.; Zhang, L.; Lv, W.; Hu, X. Altered microRNA profiles in cerebrospinal fluid exosome in Parkinson disease and Alzheimer disease. Oncotarget 2015, 6, 37043–37053. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Akers, J.C.; Gonda, D.; Kim, R.; Carter, B.S.; Chen, C.C. Biogenesis of extracellular vesicles (EV): Exosomes, microvesicles, retrovirus-like vesicles, and apoptotic bodies. J. Neurooncol. 2013, 113, 1–11. [Google Scholar] [CrossRef] [Green Version]
- Bartczak, D.; Vincent, P.; Goenaga-Infante, H. Determination of size- and number-based concentration of silica nanoparticles in a complex biological matrix by online techniques. Anal. Chem. 2015, 87, 5482–5485. [Google Scholar] [CrossRef] [PubMed]
- Al-Nedawi, K.; Meehan, B.; Micallef, J.; Lhotak, V.; May, L.; Guha, A.; Rak, J. Intercellular transfer of the oncogenic receptor EGFRvIII by microvesicles derived from tumour cells. Nat. Cell Biol. 2008, 10, 619–624. [Google Scholar] [CrossRef]
- Shedden, K.; Xie, X.T.; Chandaroy, P.; Chang, Y.T.; Rosania, G.R. Expulsion of small molecules in vesicles shed by cancer cells: Association with gene expression and chemosensitivity profiles. Cancer Res. 2003, 63, 4331–4337. [Google Scholar]
- Spaull, R.; McPherson, B.; Gialeli, A.; Clayton, A.; Uney, J.; Heep, A.; Cordero-Llana, O. Exosomes populate the cerebrospinal fluid of preterm infants with post-haemorrhagic hydrocephalus. Int. J. Dev. Neurosci. 2019, 73, 59–65. [Google Scholar] [CrossRef]
- Safaei, R.; Larson, B.J.; Cheng, T.C.; Gibson, M.A.; Otani, S.; Naerdemann, W.; Howell, S.B. Abnormal lysosomal trafficking and enhanced exosomal export of cisplatin in drug-resistant human ovarian carcinoma cells. Mol. Cancer Ther. 2005, 4, 1595–1604. [Google Scholar] [CrossRef] [PubMed] [Green Version]
- Zheng, W.; Zhao, J.; Tao, Y.; Guo, M.; Ya, Z.; Chen, C.; Qin, N.; Zheng, J.; Luo, J.; Xu, L. MicroRNA-21: A promising biomarker for the prognosis and diagnosis of non-small cell lung cancer. Oncol. Lett. 2018, 16, 2777–2782. [Google Scholar] [CrossRef] [PubMed]
- Yuan, Y.; Xu, X.Y.; Zheng, H.G.; Hua, B.J. Elevated miR-21 is associated with poor prognosis in non-small cell lung cancer: A systematic review and meta-analysis. Eur. Rev. Med. Pharmacol. Sci. 2018, 22, 4166–4180. [Google Scholar]
- Buscaglia, L.E.; Li, Y. Apoptosis and the target genes of microRNA-21. Chin. J. Cancer 2011, 30, 371–380. [Google Scholar] [CrossRef]
- Xu, L.; Huang, Y.; Chen, D.; He, J.; Zhu, W.; Zhang, Y.; Liu, X. Downregulation of miR-21 increases cisplatin sensitivity of non-small-cell lung cancer. Cancer Genet. 2014, 207, 214–220. [Google Scholar] [CrossRef]
- Prieto-Fernandez, E.; Aransay, A.M.; Royo, F.; Gonzalez, E.; Lozano, J.J.; Santos-Zorrozua, B.; Macias-Camara, N.; Gonzalez, M.; Garay, R.P.; Benito, J.; et al. A Comprehensive Study of Vesicular and Non-Vesicular miRNAs from a Volume of Cerebrospinal Fluid Compatible with Clinical Practice. Theranostics 2019, 9, 4567–4579. [Google Scholar] [CrossRef] [PubMed]
- Saugstad, J.A.; Lusardi, T.A.; Van Keuren-Jensen, K.R.; Phillips, J.I.; Lind, B.; Harrington, C.A.; McFarland, T.J.; Courtright, A.L.; Reiman, R.A.; Yeri, A.S.; et al. Analysis of extracellular RNA in cerebrospinal fluid. J. Extracell. Vesicles 2017, 6, 1317577. [Google Scholar] [CrossRef] [Green Version]
- Wiklander, O.P.B.; Bostancioglu, R.B.; Welsh, J.A.; Zickler, A.M.; Murke, F.; Corso, G.; Felldin, U.; Hagey, D.W.; Evertsson, B.; Liang, X.M.; et al. Systematic Methodological Evaluation of a Multiplex Bead-Based Flow Cytometry Assay for Detection of Extracellular Vesicle Surface Signatures. Front. Immunol. 2018, 9, 1326. [Google Scholar] [CrossRef] [Green Version]
- Bachurski, D.; Schuldner, M.; Nguyen, P.H.; Malz, A.; Reiners, K.S.; Grenzi, P.C.; Babatz, F.; Schauss, A.C.; Hansen, H.P.; Hallek, M.; et al. Extracellular vesicle measurements with nanoparticle tracking analysis—An accuracy and repeatability comparison between NanoSight NS300 and ZetaView. J. Extracell. Vesicles 2019, 8, 1596016. [Google Scholar] [CrossRef]
Groups | Total | Cancer Control (n = 100) | Healthy Control (n = 73) | LM (n = 150) | Brain Metastasis (n = 28) | Brain Tumors (n = 72) | Other Disease of CNS (n = 49) |
---|---|---|---|---|---|---|---|
Gender | |||||||
Male (%) | 215 (45%) | 70 (70%) | 31 (43%) | 53 (36%) | 13 (46%) | 36 (50%) | 12 (25%) |
Female (%) | 257 (55%) | 30 (30%) | 42 (57%) | 97 (64%) | 15 (54%) | 36 (50%) | 37 (75%) |
Median age (range) | 48 (0.2–90) | 17 (1.5–90) | 59 (20–80) | 52 (2.0–79) | 55 (7–79) | 17 (1.9–80) | 40 (0.2–83) |
Combined disease (%) | Leukemia (62) Bladder ca. (8) Bone tumor (7) Lymphoma (4) Breast ca. (3) Colon ca. (3) Prostate ca. (2) Cholangioca. (2) Melanoma (2) Others (7) | Unruptured An. (43) Moyamoya ds. (12) Hydrocephalus (5) ICA stenosis (4) BPH (2) Head trauma (2) Fibromatosis (2) Others (3) | NSCLC (64) Breast ca. (35) Glioma (15) Non-glial BT (10) SCLC (4) Stomach ca. (4) PCNSL (2) MUO (2) melanoma (2) Others (16) | NSCLC (16) Breast ca. (6) HCC (1) Melanoma (1) Ovarian ca. (2) Sarcoma (1) SCLC (1) | Glioma (19) Medulloblastoma (15) Germ cell tumor (9) Non-glial MBT (6) Ependymoma (7) Pituitary adenoma (6) Other benign BT (6) Neurinoma (4) | MS (25) ICH (13) Infection (9) Other AID (2) |
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Lee, K.-Y.; Im, J.H.; Lin, W.; Gwak, H.-S.; Kim, J.H.; Yoo, B.C.; Kim, T.H.; Park, J.B.; Park, H.J.; Kim, H.-J.; et al. Nanoparticles in 472 Human Cerebrospinal Fluid: Changes in Extracellular Vesicle Concentration and miR-21 Expression as a Biomarker for Leptomeningeal Metastasis. Cancers 2020, 12, 2745. https://doi.org/10.3390/cancers12102745
Lee K-Y, Im JH, Lin W, Gwak H-S, Kim JH, Yoo BC, Kim TH, Park JB, Park HJ, Kim H-J, et al. Nanoparticles in 472 Human Cerebrospinal Fluid: Changes in Extracellular Vesicle Concentration and miR-21 Expression as a Biomarker for Leptomeningeal Metastasis. Cancers. 2020; 12(10):2745. https://doi.org/10.3390/cancers12102745
Chicago/Turabian StyleLee, Kyue-Yim, Ji Hye Im, Weiwei Lin, Ho-Shin Gwak, Jong Heon Kim, Byong Chul Yoo, Tae Hoon Kim, Jong Bae Park, Hyeon Jin Park, Ho-Jin Kim, and et al. 2020. "Nanoparticles in 472 Human Cerebrospinal Fluid: Changes in Extracellular Vesicle Concentration and miR-21 Expression as a Biomarker for Leptomeningeal Metastasis" Cancers 12, no. 10: 2745. https://doi.org/10.3390/cancers12102745