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Microorganisms, Volume 5, Issue 4

2017 December - 19 articles

Cover Story: Much progress has been made in exploring the interactions between nutrients, microbiome, intestinal epithelium, enteric nervous, endocrine and immune systems and the brain. An array of multichannel sensing and trafficking pathways have been reported that convey the enteric signals to the brain. Their mutual and harmonious but intricate interaction is essential for human life, gut and brain performance. When this fails, it can lead to multiple inflammatory, autoimmune, neurodegenerative, metabolic and behavioral diseases. View this paper
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Articles (19)

  • Review
  • Open Access
31 Citations
12,141 Views
25 Pages

Subsocial wood feeding cockroaches in the genus Cryptocercus, the sister group of termites, retain their symbiotic gut flagellates during the host molting cycle, but in lower termites, closely related flagellates die prior to host ecdysis. Although t...

  • Review
  • Open Access
126 Citations
18,256 Views
28 Pages

The Seagrass Holobiont and Its Microbiome

  • Kelly Ugarelli,
  • Seemanti Chakrabarti,
  • Peeter Laas and
  • Ulrich Stingl

Seagrass meadows are ecologically and economically important components of many coastal areas worldwide. Ecosystem services provided by seagrasses include reducing the number of microbial pathogens in the water, providing food, shelter and nurseries...

  • Article
  • Open Access
20 Citations
7,672 Views
9 Pages

Bioactive Compounds Produced by Hypoxylon fragiforme against Staphylococcus aureus Biofilms

  • Kamila Tomoko Yuyama,
  • Clara Chepkirui,
  • Lucile Wendt,
  • Diana Fortkamp,
  • Marc Stadler and
  • Wolf-Rainer Abraham

Treating infections organized in biofilms is a challenge due to the resistance of the pathogens against antibiotics and host immune cells. Many fungi grow in a wet environment, favorable for the growth of bacterial biofilms, and we speculated that fu...

  • Article
  • Open Access
27 Citations
6,801 Views
11 Pages

Relationship among Phosphorus Circulation Activity, Bacterial Biomass, pH, and Mineral Concentration in Agricultural Soil

  • Dinesh Adhikari,
  • Tianyi Jiang,
  • Taiki Kawagoe,
  • Takamitsu Kai,
  • Kenzo Kubota,
  • Kiwako S. Araki and
  • Motoki Kubo

Improvement of phosphorus circulation in the soil is necessary to enhance phosphorus availability to plants. Phosphorus circulation activity is an index of soil’s ability to supply soluble phosphorus from organic phosphorus in the soil solution. To u...

  • Communication
  • Open Access
5 Citations
5,167 Views
12 Pages

The locus of enterocyte effacement is necessary for enteropathogenic Escherichia coli (EPEC) to form attaching and effacing (A/E) lesions. A/E lesions are characterized by intimate bacterial adherence to intestinal cells and destruction of microvilli...

  • Review
  • Open Access
585 Citations
29,954 Views
26 Pages

Bacterial Endophyte Colonization and Distribution within Plants

  • Shyam L. Kandel,
  • Pierre M. Joubert and
  • Sharon L. Doty

The plant endosphere contains a diverse group of microbial communities. There is general consensus that these microbial communities make significant contributions to plant health. Both recently adopted genomic approaches and classical microbiology te...

  • Review
  • Open Access
35 Citations
10,605 Views
16 Pages

While the microbial degradation of a chloroxyanion-based herbicide was first observed nearly ninety years ago, only recently have researchers elucidated the underlying mechanisms of perchlorate and chlorate [collectively, (per)chlorate] respiration....

  • Review
  • Open Access
116 Citations
12,995 Views
13 Pages

Despite efforts to control toxigenic Fusarium species, wilt and head-blight infections are destructive and economically damaging diseases that have global effects. The utilization of biological control agents in disease management programs has provid...

  • Article
  • Open Access
20 Citations
5,574 Views
18 Pages

Pan-Cellulosomics of Mesophilic Clostridia: Variations on a Theme

  • Bareket Dassa,
  • Ilya Borovok,
  • Vincent Lombard,
  • Bernard Henrissat,
  • Raphael Lamed,
  • Edward A. Bayer and
  • Sarah Moraïs

The bacterial cellulosome is an extracellular, multi-enzyme machinery, which efficiently depolymerizes plant biomass by degrading plant cell wall polysaccharides. Several cellulolytic bacteria have evolved various elaborate modular architectures of a...

  • Article
  • Open Access
24 Citations
5,139 Views
13 Pages

Physiological Peculiarities of Lignin-Modifying Enzyme Production by the White-Rot Basidiomycete Coriolopsis gallica Strain BCC 142

  • Vladimir Elisashvili,
  • Eva Kachlishvili,
  • Mikheil D. Asatiani,
  • Ramona Darlington and
  • Katarzyna H. Kucharzyk

Sixteen white-rot Basidiomycota isolates were screened for production of lignin-modifying enzymes (LME) in glycerol- and mandarin peel-containing media. In the synthetic medium, Cerrena unicolor strains were the only high laccase (Lac) (3.2–9.4 U/mL)...

  • Article
  • Open Access
24 Citations
5,485 Views
24 Pages

Paralytic Shellfish Toxins and Cyanotoxins in the Mediterranean: New Data from Sardinia and Sicily (Italy)

  • Antonella Lugliè,
  • Maria Grazia Giacobbe,
  • Elena Riccardi,
  • Milena Bruno,
  • Silvia Pigozzi,
  • Maria Antonietta Mariani,
  • Cecilia Teodora Satta,
  • Daniela Stacca,
  • Anna Maria Bazzoni and
  • Anna Milandri
  • + 5 authors

Harmful algal blooms represent a severe issue worldwide. They affect ecosystem functions and related services and goods, with consequences on human health and socio-economic activities. This study reports new data on paralytic shellfish toxins (PSTs)...

  • Review
  • Open Access
384 Citations
24,554 Views
21 Pages

Transmission of Bacterial Endophytes

  • Anna Carolin Frank,
  • Jessica Paola Saldierna Guzmán and
  • Jackie E. Shay

Plants are hosts to complex communities of endophytic bacteria that colonize the interior of both below- and aboveground tissues. Bacteria living inside plant tissues as endophytes can be horizontally acquired from the environment with each new gener...

  • Article
  • Open Access
6 Citations
6,451 Views
13 Pages

Terrestrial cyanobacterial strains were isolated from the Nishihara campus of the University of the Ryukyus, Okinawa, Japan. The 13 sampling sites were distributed in a 200 m radius and appeared as dry, blackened stains. From these small areas, 143 c...

  • Article
  • Open Access
16 Citations
7,265 Views
16 Pages

Linking Compositional and Functional Predictions to Decipher the Biogeochemical Significance in DFAA Turnover of Abundant Bacterioplankton Lineages in the North Sea

  • Bernd Wemheuer,
  • Franziska Wemheuer,
  • Dimitri Meier,
  • Sara Billerbeck,
  • Helge-Ansgar Giebel,
  • Meinhard Simon,
  • Christoph Scherber and
  • Rolf Daniel

Deciphering the ecological traits of abundant marine bacteria is a major challenge in marine microbial ecology. In the current study, we linked compositional and functional predictions to elucidate such traits for abundant bacterioplankton lineages i...

  • Article
  • Open Access
24 Citations
7,178 Views
17 Pages

A Two-Step Bioconversion Process for Canolol Production from Rapeseed Meal Combining an Aspergillus niger Feruloyl Esterase and the Fungus Neolentinus lepideus

  • Elise Odinot,
  • Frédéric Fine,
  • Jean-Claude Sigoillot,
  • David Navarro,
  • Oscar Laguna,
  • Alexandra Bisotto,
  • Corinne Peyronnet,
  • Christian Ginies,
  • Jérôme Lecomte and
  • Anne Lomascolo
  • + 1 author

Rapeseed meal is a cheap and abundant raw material, particularly rich in phenolic compounds of biotechnological interest. In this study, we developed a two-step bioconversion process of naturally occurring sinapic acid (4-hydroxy-3,5-dimethoxycinnami...

  • Review
  • Open Access
86 Citations
26,939 Views
24 Pages

Objectives: To comprehensively review the scientific knowledge on the gut–brain axis. Methods: Various publications on the gut–brain axis, until 31 July 2017, were screened using the Medline, Google, and Cochrane Library databases. The search was per...

  • Review
  • Open Access
30 Citations
7,933 Views
20 Pages

Cryptococcus sp. are basidiomycete yeasts which can be found widely, free-living in the environment. Interactions with natural predators, such as amoebae in the soil, are thought to have promoted the development of adaptations enabling the organism t...

  • Communication
  • Open Access
17 Citations
5,628 Views
10 Pages

Markers of Microbial Translocation and Immune Activation Predict Cognitive Processing Speed in Heavy-Drinking Men Living with HIV

  • Mollie A. Monnig,
  • Christopher W. Kahler,
  • Patricia A. Cioe,
  • Peter M. Monti,
  • Kenneth H. Mayer,
  • David W. Pantalone,
  • Ronald A. Cohen and
  • Bharat Ramratnam

HIV infection and alcohol use disorder are associated with deficits in neurocognitive function. Emerging evidence points to pro-inflammatory perturbations of the gut-brain axis as potentially contributing to neurocognitive impairment in the context o...

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Microorganisms - ISSN 2076-2607