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Article

Genome Characterization of Nocturne116, Novel Lactococcus lactis-Infecting Phage Isolated from Moth

Latvian Biomedical Research and Study Centre, Ratsupites 1 k-1, LV-1067 Riga, Latvia
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Authors to whom correspondence should be addressed.
Microorganisms 2021, 9(7), 1540; https://doi.org/10.3390/microorganisms9071540
Submission received: 29 June 2021 / Revised: 16 July 2021 / Accepted: 17 July 2021 / Published: 20 July 2021
(This article belongs to the Special Issue Bacteriophage Genomics)

Abstract

While looking for novel insect-associated phages, a unique siphophage, Nocturne116, was isolated from a deceased local moth specimen along with its host, which was identified by 16S rRNA gene sequencing as a strain of Lactococcus lactis. Next-generation sequencing and the subsequent genome annotation elaborated on herein revealed that the genome of Nocturne116 is a 25,554 bp long dsDNA molecule with 10 bp long 3′ cos overhangs and a GC content of 37.99%, comprising 52 predicted open reading frames. The complete nucleotide sequence of phage Nocturne116 genome is dissimilar to any of the already sequenced phages, save for a distant link with Lactococcus phage Q54. Functions for only 15/52 of Nocturne116 gene products could be reliably predicted using contemporary comparative genomics approaches, while 22 of its gene products do not yet have any homologous entries in the public biological sequence repositories. Despite the public availability of nearly 350 elucidated Lactococcus phage complete genomes as of now, Nocturne116 firmly stands out as a sole representative of novel phage genus.
Keywords: Lactococcus lactis; bacteriophage isolation; insect-associated phage; whole genome sequencing; complete genome; genome annotation; comparative genomics; phage diversity Lactococcus lactis; bacteriophage isolation; insect-associated phage; whole genome sequencing; complete genome; genome annotation; comparative genomics; phage diversity

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MDPI and ACS Style

Zrelovs, N.; Dislers, A.; Kazaks, A. Genome Characterization of Nocturne116, Novel Lactococcus lactis-Infecting Phage Isolated from Moth. Microorganisms 2021, 9, 1540. https://doi.org/10.3390/microorganisms9071540

AMA Style

Zrelovs N, Dislers A, Kazaks A. Genome Characterization of Nocturne116, Novel Lactococcus lactis-Infecting Phage Isolated from Moth. Microorganisms. 2021; 9(7):1540. https://doi.org/10.3390/microorganisms9071540

Chicago/Turabian Style

Zrelovs, Nikita, Andris Dislers, and Andris Kazaks. 2021. "Genome Characterization of Nocturne116, Novel Lactococcus lactis-Infecting Phage Isolated from Moth" Microorganisms 9, no. 7: 1540. https://doi.org/10.3390/microorganisms9071540

APA Style

Zrelovs, N., Dislers, A., & Kazaks, A. (2021). Genome Characterization of Nocturne116, Novel Lactococcus lactis-Infecting Phage Isolated from Moth. Microorganisms, 9(7), 1540. https://doi.org/10.3390/microorganisms9071540

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