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Article

Accurate Prediction and Key Feature Recognition of Immunoglobulin

1
Key Laboratory of Computational Science and Application of Hainan Province, Haikou 571158, China
2
Key Laboratory of Data Science and Smart Education, Hainan Normal University, Ministry of Education, Haikou 571158, China
3
School of Mathematics and Statistics, Hainan Normal University, Haikou 571158, China
4
Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China, Quzhou 324000, China
*
Author to whom correspondence should be addressed.
Appl. Sci. 2021, 11(15), 6894; https://doi.org/10.3390/app11156894
Submission received: 18 May 2021 / Revised: 21 July 2021 / Accepted: 22 July 2021 / Published: 27 July 2021

Abstract

Immunoglobulin, which is also called an antibody, is a type of serum protein produced by B cells that can specifically bind to the corresponding antigen. Immunoglobulin is closely related to many diseases and plays a key role in medical and biological circles. Therefore, the use of effective methods to improve the accuracy of immunoglobulin classification is of great significance for disease research. In this paper, the CC–PSSM and monoTriKGap methods were selected to extract the immunoglobulin features, MRMD1.0 and MRMD2.0 were used to reduce the feature dimension, and the effect of discriminating the two–dimensional key features identified by the single dimension reduction method from the mixed two–dimensional key features was used to distinguish the immunoglobulins. The data results indicated that monoTrikGap (k = 1) can accurately predict 99.5614% of immunoglobulins under 5-fold cross–validation. In addition, CC–PSSM is the best method for identifying mixed two–dimensional key features and can distinguish 92.1053% of immunoglobulins. The above proves that the method used in this paper is reliable for predicting immunoglobulin and identifying key features.
Keywords: immunoglobulin; profile–based cross covariance; monoTriKGap; MRMD immunoglobulin; profile–based cross covariance; monoTriKGap; MRMD
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MDPI and ACS Style

Gong, Y.; Liao, B.; Peng, D.; Zou, Q. Accurate Prediction and Key Feature Recognition of Immunoglobulin. Appl. Sci. 2021, 11, 6894. https://doi.org/10.3390/app11156894

AMA Style

Gong Y, Liao B, Peng D, Zou Q. Accurate Prediction and Key Feature Recognition of Immunoglobulin. Applied Sciences. 2021; 11(15):6894. https://doi.org/10.3390/app11156894

Chicago/Turabian Style

Gong, Yuxin, Bo Liao, Dejun Peng, and Quan Zou. 2021. "Accurate Prediction and Key Feature Recognition of Immunoglobulin" Applied Sciences 11, no. 15: 6894. https://doi.org/10.3390/app11156894

APA Style

Gong, Y., Liao, B., Peng, D., & Zou, Q. (2021). Accurate Prediction and Key Feature Recognition of Immunoglobulin. Applied Sciences, 11(15), 6894. https://doi.org/10.3390/app11156894

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