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Article

Bulk RNA Barcode Sequencing Reveals Role of RNA Splicing in Aging Dermal Stem Cell Modulation by a Botanical Extract

1
Mibelle Group Biochemistry, 5033 Buchs, Aargau, Switzerland
2
Curio Biotech Ltd., 3930 Visp, Bern, Switzerland
*
Author to whom correspondence should be addressed.
Cosmetics 2024, 11(5), 167; https://doi.org/10.3390/cosmetics11050167 (registering DOI)
Submission received: 23 August 2024 / Revised: 20 September 2024 / Accepted: 23 September 2024 / Published: 27 September 2024

Abstract

Skin aging is a complex, multifaceted process influenced by both intrinsic and extrinsic factors. Understanding the molecular mechanisms underlying skin aging is crucial for developing effective anti-aging strategies. Dermal stem cells play a pivotal role in maintaining skin homeostasis, but their functionality is compromised with aging. This study investigated the impact of aging on dermal stem cells and explored the potential of natural extracts in modulating their biological characteristics. Using bulk RNA barcoding and sequencing (BRB-seq), we identified differentially expressed genes (DEGs) between young and aged dermal stem cells, revealing alterations in cellular processes, including cell proliferation, ECM synthesis, and RNA splicing. We also demonstrated that a natural extract, comprising callus cells and Alpine rose leaf extracts, influenced RNA splicing in aged dermal stem cells, leading to improved dermal structure and integrity in vitro. Our findings suggest that natural extracts may exert their effects through senolytic activity and the modulation of RNA splicing, a process crucial to gene expression and cellular function. This study underscores the potential of integrating high-throughput transcriptomics in understanding skin aging, presenting new avenues for the development of innovative, sustainable, and effective anti-aging strategies.
Keywords: xeno-free; primary human 3D culture; PhytoCellTecTM; emerging hallmark of aging; skin longevity; callus cells xeno-free; primary human 3D culture; PhytoCellTecTM; emerging hallmark of aging; skin longevity; callus cells

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MDPI and ACS Style

Baumann, J.; Vocat, V.; Nowak, K.; Zülli, F.; Cuddapah, C.; Wandrey, F. Bulk RNA Barcode Sequencing Reveals Role of RNA Splicing in Aging Dermal Stem Cell Modulation by a Botanical Extract. Cosmetics 2024, 11, 167. https://doi.org/10.3390/cosmetics11050167

AMA Style

Baumann J, Vocat V, Nowak K, Zülli F, Cuddapah C, Wandrey F. Bulk RNA Barcode Sequencing Reveals Role of RNA Splicing in Aging Dermal Stem Cell Modulation by a Botanical Extract. Cosmetics. 2024; 11(5):167. https://doi.org/10.3390/cosmetics11050167

Chicago/Turabian Style

Baumann, Julia, Valentine Vocat, Kathrin Nowak, Fred Zülli, Chennakesava Cuddapah, and Franziska Wandrey. 2024. "Bulk RNA Barcode Sequencing Reveals Role of RNA Splicing in Aging Dermal Stem Cell Modulation by a Botanical Extract" Cosmetics 11, no. 5: 167. https://doi.org/10.3390/cosmetics11050167

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