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Article

Characterization of the Ohmyungsamycin Biosynthetic Pathway and Generation of Derivatives with Improved Antituberculosis Activity

1
Department of Chemistry and Nanoscience, Ewha Womans University, Seoul 03760, Korea
2
Natural Products Research Institute, College of Pharmacy, Seoul National University, Seoul 08826, Korea
3
Division of Applied Life Science (BK21plus Program), Gyeongsang National University, Jinju 52828, Korea
4
iNtRON Biotechnology, Inc., Seongnam-si, Gyeonggi-do 13202, Korea
*
Authors to whom correspondence should be addressed.
These authors contributed equally to this work.
Biomolecules 2019, 9(11), 672; https://doi.org/10.3390/biom9110672
Submission received: 19 September 2019 / Revised: 26 October 2019 / Accepted: 28 October 2019 / Published: 30 October 2019
(This article belongs to the Special Issue Recent Advance of Actinomycetes)

Abstract

The cyclic depsipeptides ohmyungsamycin (OMS) A (1) and B (2), isolated from the marine-derived Streptomyces sp. SNJ042, contain two non-proteinogenic amino acid residues, β-hydroxy-l-phenylalanine (β-hydroxy-l-Phe) and 4-methoxy-l-tryptophan (4-methoxy-l-Trp). Draft genome sequencing of Streptomyces sp. SNJ042 revealed the OMS biosynthetic gene cluster consisting of a nonribosomal peptide synthetase (NRPS) gene and three genes for amino acid modification. By gene inactivation and analysis of the accumulated products, we found that OhmL, encoding a P450 gene, is an l-Phe β-hydroxylase. Furthermore, OhmK, encoding a Trp 2,3-dioxygenase homolog, and OhmJ, encoding an O-methyltransferase, are suggested to be involved in hydroxylation and O-methylation reactions, respectively, in the biosynthesis of 4-methoxy-l-Trp. In addition, the antiproliferative and antituberculosis activities of the OMS derivatives dehydroxy-OMS A (4) and demethoxy-OMS A (6) obtained from the mutant strains were evaluated in vitro. Interestingly, dehydroxy-OMS A (4) displayed significantly improved antituberculosis activity and decreased cytotoxicity compared to wild-type OMS A.
Keywords: ohmyungsamycin; marine natural product; nonribosomal peptide synthetase; biosynthetic gene cluster; antituberculosis activity ohmyungsamycin; marine natural product; nonribosomal peptide synthetase; biosynthetic gene cluster; antituberculosis activity

Share and Cite

MDPI and ACS Style

Kim, E.; Shin, Y.-H.; Kim, T.H.; Byun, W.S.; Cui, J.; Du, Y.E.; Lim, H.-J.; Song, M.C.; Kwon, A.S.; Kang, S.H.; et al. Characterization of the Ohmyungsamycin Biosynthetic Pathway and Generation of Derivatives with Improved Antituberculosis Activity. Biomolecules 2019, 9, 672. https://doi.org/10.3390/biom9110672

AMA Style

Kim E, Shin Y-H, Kim TH, Byun WS, Cui J, Du YE, Lim H-J, Song MC, Kwon AS, Kang SH, et al. Characterization of the Ohmyungsamycin Biosynthetic Pathway and Generation of Derivatives with Improved Antituberculosis Activity. Biomolecules. 2019; 9(11):672. https://doi.org/10.3390/biom9110672

Chicago/Turabian Style

Kim, Eunji, Yern-Hyerk Shin, Tae Ho Kim, Woong Sub Byun, Jinsheng Cui, Young Eun Du, Hyung-Ju Lim, Myoung Chong Song, An Sung Kwon, Sang Hyeon Kang, and et al. 2019. "Characterization of the Ohmyungsamycin Biosynthetic Pathway and Generation of Derivatives with Improved Antituberculosis Activity" Biomolecules 9, no. 11: 672. https://doi.org/10.3390/biom9110672

APA Style

Kim, E., Shin, Y.-H., Kim, T. H., Byun, W. S., Cui, J., Du, Y. E., Lim, H.-J., Song, M. C., Kwon, A. S., Kang, S. H., Shin, J., Lee, S. K., Jang, J., Oh, D.-C., & Yoon, Y. J. (2019). Characterization of the Ohmyungsamycin Biosynthetic Pathway and Generation of Derivatives with Improved Antituberculosis Activity. Biomolecules, 9(11), 672. https://doi.org/10.3390/biom9110672

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