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Biomolecules

Biomolecules is an international, peer-reviewed, open access journal on structures and functions of bioactive and biogenic substances, molecular mechanisms with biological and medical implications as well as biomaterials and their applications, published monthly online by MDPI.

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All Articles (13,856)

  • Review
  • Open Access

Oral diseases have affected a large population worldwide. Phytochemicals have shown antioxidant, antibacterial, and anti-cancer properties, suggesting their potential for managing oral diseases. Conventional dosage forms containing phytochemicals are commercially available and have demonstrated promising effects in oral conditions. Recently, numerous phytochemical-based novel delivery systems (liposomes, niosomes, nanoparticles, nanofibers, hydrogels, etc.) have also been prepared to improve the efficacy of phytochemicals in managing the conditions discussed here. These novel delivery systems can improve local retention, protect phytochemicals from degradation, enhance penetration and bioavailability, and provide controlled or sustained release. This review therefore offers a delivery-system-focused perspective. Research articles from 2013 to 2026 were systematically reviewed. Preclinical and clinical applications of phenolic compounds (catechins, curcumin, quercetin, and resveratrol), carotenoids (lycopene, astaxanthin, and β-carotene), and alkaloids (berberine and piperine) for managing periodontal diseases, oral cancers, potentially malignant oral disorders, dental caries, oral candidiasis, and oral ulcers are summarized. The article provides an overview of oral diseases, classification, common phytochemicals, mechanisms, and clinical improvements. Finally, conventional and novel drug delivery systems loaded with phytochemicals are discussed. This work explores challenges and outlines future directions, with special attention to the role of artificial intelligence.

Biomolecules

5 November 2026

Schematic representation of major oral diseases and pathological conditions discussed in this review, including oral squamous cell carcinoma, oral candidiasis, oral leukoplakia, oral erythroplakia, gingivitis, dental caries, and periodontitis. Labels and illustrations identify each condition and its predominantly affected tissue, such as the gingival margin and periodontal tissues for periodontal diseases, the oral mucosa/tongue for oral squamous cell carcinoma, mucosal patches for leukoplakia and erythroplakia, the oral mucosa/palate for candidiasis, and tooth surfaces for caries. The figure is illustrative and not drawn to scale; it is intended to show conditions covered in the review rather than to provide diagnostic or anatomical detail.
  • Review
  • Open Access

Cerebral amyloid-β (Aβ) burden in Alzheimer’s disease (AD) reflects the balance among peptide production, degradation, movement between compartments and retention within cerebral vessel walls. Across the reviewed evidence, cerebrovascular adaptation was the most consistently observed exercise response, although its direction and measurement varied across studies and it did not by itself establish Aβ removal. Direct evidence for exercise-related Aβ movement was narrower and predominantly preclinical. Animal studies report improved vascular responsiveness, blood–brain barrier-related phenotypes and aquaporin-4-sensitive fluid exchange; selected tracer experiments further show greater short-term recovery of brain-administered Aβ in blood, lymphatic or peripheral compartments. Cellular and peripheral studies identify candidate routes for the degradation and downstream handling of redistributed peptide. Human trials generally show improved fitness or cerebrovascular function without clear between-group changes in Aβ-PET or plasma Aβ over the measured periods. The pattern is compartment- and timescale-specific: functional adaptation and measured amyloid burden capture different components of the exercise response. Source-matched recovery in a downstream compartment, when coupled with a time-resolved decline in the same brain-derived signal, can establish net removal from the brain but not whole-body terminal disposal; the latter requires verified irreversible degradation or excretion of the tracked peptide. The sustained net removal of endogenous brain Aβ also requires a concurrent assessment of production and vessel-wall retention. Overall, cerebrovascular and fluid-transport adaptation is the best-supported exercise-responsive context for Aβ disposition, whereas neither sustained net removal of brain Aβ nor whole-body terminal disposal has been established in human exercise studies.

Biomolecules

5 November 2026

Exercise-related neurovascular responses and distinct routes relevant to Aβ disposition. (a) Barrier support and blood–brain barrier transport. Exercise-associated brain extracellular vesicles carrying miR-532-5p are linked to EPHA4 suppression and barrier-support phenotypes in pericytes and endothelial cells. Separate experiments measured the increased plasma recovery of brain-administered Aβ42 [12]. These observations are displayed separately from the mechanistic context of polarized endothelial transport, including brain-facing LRP1-mediated uptake, PICALM-associated intracellular trafficking, blood-facing ABCB1/P-glycoprotein-associated efflux, and RAGE-mediated transport in the opposite direction [7,16,17,18,19,20]. The molecular handoff toward ABCB1/P-glycoprotein and the final release step remain unresolved. The transporter responsible for the exercise-associated Aβ42 tracer response has not been established. (b) Intramural periarterial drainage and vessel-wall retention. IPAD is depicted from brain interstitial fluid along capillary basement membranes and basement membranes within arterial walls toward larger surface arteries, counter to luminal blood flow [9,25]. Low-frequency vasomotion is indicated as a candidate driving mechanism, distinct from resting perfusion and stimulus-evoked vascular reactivity [8,25]. Vessel-wall Aβ retention and CAA are shown as a separate outcome rather than an obligatory endpoint of drainage. This panel provides anatomical and mechanistic context; exercise-enhanced IPAD is not established by the illustrated observations. (c) CSF–ISF exchange. AQP4 at astrocytic endfeet facilitates transmembrane water movement. Water droplets passing through AQP4 are distinguished from extracellular solute symbols, which represent tracer distribution in CSF/periarterial and interstitial spaces [10,26,39,40]. The orange diamonds denote extracellular solutes rather than Aβ passing through AQP4. Changes in CSF-tracer distribution characterize fluid exchange and do not by themselves establish the net removal of interstitial Aβ. (d) Meningeal-lymphatic drainage. Brain-administered Aβ42 tracing and CSF-administered nanoparticle measurements are presented as separate experimental approaches [34,35]. Tracer detection in meningeal-lymphatic vessels or deep cervical lymph nodes identifies sampled downstream compartments, while the upstream delivery route and subsequent peptide fate remain unresolved. The ligation symbol marks experimental interruption of the afferent lymphatic vessels entering the nodes, with the interrupted connection indicating blockade at this site. Nanoparticle drainage is a fluid-transport surrogate rather than an Aβ-specific fate measurement. Teal connectors identify exercise-linked evidence, solid slate connectors indicate mechanistic context, and dashed connectors mark relationships requiring direct testing. These categories identify the basis of a connection rather than assigning the same causal strength to every observation. The panels summarize evidence from different experiments and do not constitute a single demonstrated pathway. Abbreviations: Aβ, amyloid-β; ABCB1/P-gp, ATP-binding cassette subfamily B member 1/P-glycoprotein; AQP4, aquaporin-4; BBB, blood–brain barrier; CAA, cerebral amyloid angiopathy; CSF, cerebrospinal fluid; dCLNs, deep cervical lymph nodes; EPHA4, ephrin type-A receptor 4; EVs, extracellular vesicles; IPAD, intramural periarterial drainage; ISF, interstitial fluid; LRP1, low-density lipoprotein receptor-related protein 1; PICALM, phosphatidylinositol-binding clathrin assembly protein; RAGE, receptor for advanced glycation end products.
  • Article
  • Open Access

Association of Inflammatory Biomarkers with Child–Pugh and MELD Scores in Alcohol-Related Cirrhosis

  • Luciana-Florentina Vasile,
  • Mihaela Ionescu and
  • Carmen-Daniela Neagoe
  • + 6 authors

Background: Cirrhosis is characterized by persistent systemic inflammation and immune dysregulation, both contributing to disease progression and poor clinical outcomes. Readily available inflammatory biomarkers have been proposed as complementary tools for disease severity assessment; however, data in alcohol-related cirrhosis remain limited. This study aimed to evaluate the association between inflammatory markers and established severity scores in patients with alcohol-related cirrhosis. Methods: This prospective cross-sectional observational single-center study included 114 consecutively enrolled patients with alcohol-related cirrhosis (mean age 58.48 ± 9.09 years; 77.19% male) at the Gastroenterology/Internal Medicine I Department of the Emergency Clinical Hospital of Craiova between September 2024 and February 2025. Inflammatory biomarkers, including C-reactive protein, ferritin, neutrophil-to-lymphocyte ratio (NLR), platelet-to-lymphocyte ratio (PLR), lymphocyte-to-monocyte ratio (LMR), and systemic immune-inflammation index (SII), were analyzed in relation to Child–Pugh and MELD scores. Correlation and regression analyses were performed to assess their associations with disease severity. Results: CRP, ferritin, NLR, and LMR showed significant correlations with both Child–Pugh and MELD scores, whereas PLR and SII were not significantly associated with disease severity. In multivariable analyses, ferritin remained significantly associated with both Child–Pugh and MELD severity, whereas LMR remained significantly associated only with Child–Pugh severity. Overall, correlations were numerically stronger for Child–Pugh with CRP and LMR, whereas ferritin and NLR showed a slightly stronger correlation with MELD. Conclusions: Several inflammatory biomarkers were associated with established severity scores in alcohol-related cirrhosis, with ferritin showing the most consistent association across both scoring systems. These findings support the relationship between systemic inflammation and disease severity in alcohol-related cirrhosis.

Biomolecules

4 November 2026

Markers’ trend across the Child–Pugh categories.
  • Article
  • Open Access

Wool fibre diameter is a key economic trait in wool-producing animals, and its formation is regulated by the synergistic interaction between the proliferation and differentiation of hair follicle stem cells (HFSCs) and signals from the microenvironment. Dermal papilla cells (DPCs), as a key signal source, regulate the fate of HFSCs via paracrine pathways; however, the key molecular mechanisms remain unclear. Single-cell RNA sequencing (scRNA-seq) and genome-wide association studies (GWAS) revealed that ZNF280B is specifically expressed in both DPCs and HFSCs, and its g.677G>A variant is significantly associated with wool fibre diameter. Functional studies indicate that overexpression of ZNF280B promotes the proliferation of DPCs and HFSCs and inhibits apoptosis, whilst knockdown has the opposite effect; mechanistically, ZNF280B alters mRNA levels of key marker genes of the Wnt/β-catenin signalling pathway while selectively changing transcripts of the TGF-β pathway components in DPCs, and differentially modulates key marker transcripts in both the Wnt/β-catenin and Notch pathways in HFSCs. In summary, ZNF280B mediates the paracrine signalling of DPCs to influence HFSC proliferation and differentiation. It achieves this by integrating the Wnt/β-catenin/TGF-β/Notch signalling axes. This reveals that ZNF280B acts as an important regulatory node mediating DPC-HFSC paracrine communication, and provides new insights into the developmental mechanisms of fine-wool hair follicles and molecular breeding for fibre diameter.

Biomolecules

4 November 2026

Schematic diagram of the isolation, purification and indirect co-culture model of DPCs and HFSCs.

Featured Articles of Last Quarter

Three-dimensional structural representations of molecular biosystems central to neurodegenerative diseases: (a) amyloid-β peptide, associated with extracellular plaque formation in AD, and (b) α-Synuclein fibrils forming the core of Lewy bodies in PD and related synucleinopathies. The fibrillar conformations shown illustrate the β-sheet–rich architectures that promote aggregation, seeding, and neurotoxicity. Structures were obtained from the RCSB Protein Data Bank (https://www.rcsb.org/3d-view/1IYT/0 and https://www.rcsb.org/3d-view/2N0A/0, respectively, both accessed on 11 December 2025).
NTD-ganglioside-induced conformational change in the Spike trimer. The three subunits of the Spike trimer are colored cyan, yellow, and purple. Each NTD is located at the periphery of the trimer. Following the binding of one NTD to a lipid raft enriched in gangliosides, a conformational change propagates throughout the involved subunit (the one in cyan in this example) until it reaches the neighboring subunit (colored yellow). Areas of the NTD whose conformation has been modified after interaction with the raft are indicated in red. Note that the conformational rearrangements affect distant domains of the NTD, including the contact zone with the neighboring subunit. This triggers the unmasking of the RBD of the yellow subunit, now able to bind the ACE-2 receptor. Overall, this process is functionally reminiscent of interfacial activation [60]. Trimeric structures in the closed pre-fusion conformation were constructed with Swiss-PdbViewer [61] by homology with a reference model (pdb: 6VSB) [62]. ACE2 and the spike trimer in the open conformation were from pdb 7DK3 [37]. Protein structures were generated with Molegro Molecular Viewer 2.5 (MMV, http://molexus.io/molegro-molecular-viewer/ accessed on 3 March 2025).
Methyltransferases (writers) and methylases (erasers) regulate cellular m6A levels. Different readers recognize m6A methylations and direct RNAs to various pathways.

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Biomolecules - ISSN 2218-273X