Prototyping a Knowledge-Based System to Identify Botanical Extracts for Plant Health in Sub-Saharan Africa
Abstract
:1. Introduction
1.1. Marketed Formulations
1.2. Extemporaneous Preparations
2. Materials and Methods
- The knowledge base (KB) presented in Section 2.1;
- The Conceptual Harvester (CH), which contains a set of methods to navigate and explore KB, as presented in Section 2.2;
- A reference library, which is implemented using Zotero software and contains all of the documents from which the data compiled in KB were extracted.
2.1. Description of the Knowledge Base (KB)
2.1.1. Data Origin
2.1.2. Structure of the Microsoft® Excel File
2.1.3. Ontology and System Architecture
2.2. Conceptual Harvester
3. Results
3.1. Content of the Knowledge Base (Plant Health)
3.1.1. Protected Systems
- Crop protection in the field: this applies to all field crops.
- Seeds: this concerns the preservation of plant organs to be sown the following crop season and pre-sowing treatments, if any.
- Stored grain: this concerns postharvest grain storage, often in granaries, which is very important in African dryland areas to ensure a food supply for the population during the ‘lean season’.
- Foods: this concerns the food crop postharvest period. Plant extracts are used to prevent spoilage of plant-derived food by contaminants such as toxin-producing microorganisms.
3.1.2. Targeted Organisms
- Arthropods, such as insects or mites, some insects that may be plant disease vectors, such as the aphid Brevicoryne brassicae (L.) or the whitefly Bemisia tabaci (Gennadius). Insect pests of grain stored in cowpea or maize granaries are also present, such as the weevils Callosobruchus maculatus [113] and Caryedon serratus (Olivier);
- Phytopathogenic nematodes such as Meloidogyne incognita or M. javanica;
- Pathogenic microorganisms causing fungal diseases (Alternaria solani, Aspergillus flavus, Fusarium oxysporum). Bacterial diseases are only represented by Xanthomonas campestris pv. malvacearum [96].
3.1.3. Pesticidal Plant Species
3.2. Results for Two Invasive Species (T. absoluta and S. frugiperda)
4. Discussion
4.1. Knowledge Base (KB)
4.2. Knowledge Engineering
4.3. Identifying Multipurpose Species: A Promising Approach
5. Conclusions
6. Patents
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Acknowledgments
Conflicts of Interest
References
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Botanical Family | Species | Botanical Family | Species |
---|---|---|---|
Amaranthaceae | Dysphania ambrosioides | Lythraceae | Lawsonia inermis |
Amaryllidaceae | Allium cepa | Meliaceae | Azadirachta indica |
Allium sativum | Entandrophragma angolense | ||
Apiaceae | Coriandrum sativum | Melia azedarach | |
Eryngium foetidum | Trichilia pallida | ||
Apocynaceae | Allamanda cathartica | Moraceae | Ficus elastica |
Calotropis gigantea | Musaceae | Musa sp. | |
Calotropis procera | Myrtaceae | Callistemon citrinus | |
Vincetoxicum canescens | Eucalyptus camaldulensis | ||
Vincetoxicum fuscatum | Eucalyptus saligna | ||
Vincetoxicum parviflorum | Eucalyptus tereticornis | ||
Asteraceae | Acanthostyles buniifolius | Eugenia egensis | |
Acmella oleracea | Syzygium aromaticum | ||
Ageratum conyzoides | Nitrariaceae | Peganum harmala | |
Ageratum houstonianum | Nyctaginaceae | Bougainvillea glabra | |
Artemisia absinthium | Oxalidaceae | Oxalis barrelieri | |
Artemisia annua | Papaveraceae | Argemone mexicana | |
Artemisia cina | Piperaceae | Piper aduncum | |
Artemisia vulgaris | Piper amalago | ||
Bidens pilosa | Piper augustum | ||
Calendula officinalis | Piper glabratum | ||
Eclipta prostrata | Piper mikanianum | ||
Emilia coccinea | Piper mollicomum | ||
Erigeron floribundus | Poaceae | Cymbopogon citratus | |
Guizotia abyssinica | Digitaria eriantha | ||
Tagetes erecta | Podocarpaceae | Podocarpus milanjianus | |
Bignoniaceae | Spathodea campanulata | Primulaceae | Clavija weberbaueri |
Brassicaceae | Brassica rapa | Rosaceae | Rosa damascena |
Capparaceae | Crateva religiosa | Rutaceae | Citrus × aurantium |
Clusiaceae | Garcinia smeathmanii | Citrus limon | |
Commelinaceae | Commelina benghalensis | Citrus reticulata | |
Cupressaceae | Tetraclinis articulata | Citrus sinensis | |
Dilleniaceae | Curatella americana | Clausena anisata | |
Dipterocarpaceae | Shorea robusta | Salicaceae | Banara guianensis |
Euphorbiaceae | Euphorbia hirta | Salicaceae | Banara nitida |
Jatropha curcas | Mayna parvifolia | ||
Ricinus communis | Ryania speciosa | ||
Fabaceae | Bauhinia variegata | Sapindaceae | Deinbollia saligna |
Copaifera duckei | Sapotaceae | Argania spinosa | |
Ononis natrix | Madhuca longifolia | ||
Pongamia pinnata | Simmondsiaceae | Simmondsia chinensis | |
Sesbania bispinosa | Siparunaceae | Siparuna poeppigii | |
Tephrosia vogelii | Solanaceae | Nicotiana sp. | |
Geraniaceae | Pelargonium zonale | Solanum delagoense | |
Lamiaceae | Ajuga chamaepitys | Tropaeolaceae | Tropaeolum majus |
Mentha spicata | Urticaceae | Urtica dioica | |
Ocimum basilicum | Verbenaceae | Lippia javanica | |
Ocimum gratissimum | Lippia multiflora | ||
Thymbra capitata | Zingiberaceae | Elettaria cardamomum | |
Thymus vulgaris | |||
Zataria multiflora |
Botanical Family | Species | Parts of the Plant Used |
---|---|---|
Amaranthaceae | Chenopodium opulifolium | All, dried leaves |
Dysphania ambrosioides | Leaves | |
Amaryllidaceae | Allium sativum | Cloves |
Asphodelaceae | Aloe spp. | All |
Asteraceae | Tithonia diversifolia | Dried leaves |
Vernonia amygdalina | Dried leaves | |
Dryopteridaceae | Dryopteris filix-mas | Leaves |
Fabaceae | Gliricidia sepium | Fresh or dried leaves, seeds |
Senna siamea | All | |
Tephrosia vogelii | All | |
Lamiaceae | Ocimum gratissimum | All, leaves |
Meliaceae | Azadirachta indica | All |
Melia azedarach | Dried leaves | |
Myrtaceae | Callistemon viminalis | Leaves |
Eucalyptus spp. | All | |
Solanaceae | Capsicum annuum | Not indicated |
Capsicum spp. | All, fresh fruits | |
Nicotiana tabacum | All | |
Urticaceae | Urtica dioica | Leaves |
Botanical Family | Species | Botanical Family | Species |
---|---|---|---|
Amaranthaceae | Dysphania ambrosioides | Meliaceae | Azadirachta indica |
Annonaceae | Annona muricata | Khaya senegalensis | |
Annona senegalensis | Melia azedarach | ||
Monodora myristica | Moraceae | Ficus exasperata | |
Xylopia aethiopica | Moringaceae | Moringa oleifera | |
Apiaceae | Foeniculum vulgare | Myrtaceae | Callistemon rigidus |
Apocynaceae | Pergularia daemia | Corymbia citriodora | |
Asparagaceae | Dracaena arborea | Eucalyptus saligna | |
Asteraceae | Blumea oloptera | Eucalyptus staigeriana | |
Blumea viscosa | Opiliaceae | Opilia amentacea | |
Helianthus annuus | Poaceae | Cymbopogon citratus | |
Tagetes minuta | Cymbopogon flexuosus | ||
Tithonia diversifolia | Cymbopogon giganteus | ||
Vernonia amygdalina | Cymbopogon nardus | ||
Boraginaceae | Heliotropium indicum | Cymbopogon schoenanthus | |
Capparaceae | Boscia senegalensis | Cymbopogon winterianus | |
Crateva religiosa | Polygalaceae | Securidaca longipedunculata | |
Caricaceae | Carica papaya | Rutaceae | Clausena anisata |
Combretaceae | Combretum imberbe | Solanaceae | Capsicum annuum |
Combretum micranthum | Capsicum spp. | ||
Cucurbitaceae | Momordica charantia | Nicotiana tabacum | |
Euphorbiaceae | Euphorbia lateriflora | Verbenaceae | Lantana camara |
Spirostachys africana | Lippia javanica | ||
Fabaceae | Chamaecrista nigricans | Lippia multiflora | |
Gliricidia sepium | Lippia rugosa | ||
Tephrosia densiflora | Zingiberaceae | Alpinia calcarata | |
Tephrosia vogelii | |||
Lamiaceae | Hyptis spicigera | ||
Hyptis suaveolens | |||
Ocimum americanum | |||
Ocimum basilicum | |||
Ocimum gratissimum | |||
Plectranthus glandulosus | |||
Tetradenia multiflora |
Scheme 710. | Botanical Family | Number of Lines | Rank |
---|---|---|---|
Azadirachta indica | Meliaceae | 710 | 79 |
Ocimum gratissimum | Lamiaceae | 306 | 78 |
Not indicated | Not indicated | 237 | 77 |
Dysphania ambrosioides | Amaranthaceae | 211 | 76 |
Allium sativum | Amaryllidaceae | 194 | 75 |
Lantana camara | Verbenaceae | 178 | 74 |
Cymbopogon citratus | Poaceae | 164 | 73 |
Tephrosia vogelii | Fabaceae | 156 | 72 |
Ocimum basilicum | Lamiaceae | 142 | 71 |
Carica papaya | Caricaceae | 130 | 70 |
Callistemon citrinus | Myrtaceae | 120 | 69 |
Melia azedarach | Meliaceae | 120 | 69 |
Citrus sinensis | Rutaceae | 114 | 68 |
Ageratum conyzoides | Asteraceae | 91 | 67 |
Melia volkensii | Meliaceae | 89 | 66 |
Rosmarinus officinalis | Lamiaceae | 86 | 65 |
Senna crotalarioides | Fabaceae | 85 | 64 |
Citrus limon | Rutaceae | 79 | 63 |
Nicotiana tabacum | Solanaceae | 73 | 62 |
Thymus vulgaris | Lamiaceae | 71 | 61 |
Syzygium aromaticum | Myrtaceae | 69 | 60 |
Tithonia diversifolia | Asteraceae | 69 | 60 |
Moringa oleifera | Moringaceae | 67 | 59 |
Euphorbia hirta | Euphorbiaceae | 66 | 58 |
Xylopia aethiopica | Annonaceae | 66 | 58 |
Citrus reticulata | Rutaceae | 64 | 57 |
Capsicum annuum | Solanaceae | 63 | 56 |
Ricinus communis | Euphorbiaceae | 63 | 56 |
Monodora myristica | Annonaceae | 62 | 55 |
Erigeron floribundus | Asteraceae | 61 | 54 |
Euphorbia lateriflora | Euphorbiaceae | 61 | 54 |
Pimpinella anisum | Apiaceae | 60 | 53 |
Eucalyptus camaldulensis | Myrtaceae | 59 | 52 |
Foeniculum vulgare | Apiaceae | 57 | 51 |
Bidens pilosa | Asteraceae | 55 | 50 |
Vernonia amygdalina | Asteraceae | 54 | 49 |
Hyptis spicigera | Lamiaceae | 53 | 48 |
Boscia senegalensis | Capparaceae | 52 | 47 |
Mentha × piperita | Lamiaceae | 52 | 47 |
Cuminum cyminum | Apiaceae | 51 | 46 |
Eclipta prostrata | Asteraceae | 51 | 46 |
Eucalyptus tereticornis | Myrtaceae | 51 | 46 |
Commelina benghalensis | Commelinaceae | 50 | 45 |
Emilia coccinea | Asteraceae | 50 | 45 |
Oxalis barrelieri | Oxalidaceae | 50 | 45 |
Podocarpus milanjianus | Podocarpaceae | 50 | 45 |
Botanical Family | Genus or Species | Botanical Family | Genus or Species |
---|---|---|---|
Amaranthaceae | Dysphania ambrosioides | Meliaceae | Azadirachta indica |
Amaryllidaceae | Allium cepa | Melia azedarach | |
Allium sativum | Trichilia pallida | ||
Apiaceae | Coriandrum sativum | Myrtaceae | Eucalyptus camaldulensis |
Apocynaceae | Allamanda cathartica | Eugenia egensis | |
Asteraceae | Acanthostyles buniifolius | Syzygium aromaticum | |
Acmella oleracea | Nitrariaceae | Peganum harmala | |
Ageratum conyzoides | Nyctaginaceae | Bougainvillea glabra | |
Artemisia absinthium | Papaveraceae | Argemone mexicana | |
Artemisia annua | Piperaceae | Piper aduncum | |
Artemisia cina | Piper amalago | ||
Artemisia vulgaris | Piper augustum | ||
Calendula officinalis | Piper glabratum | ||
Bignoniaceae | Spathodea campanulata | Piper mikanianum | |
Capparaceae | Crateva religiosa | Piper mollicomum | |
Cupressaceae | Tetraclinis articulata | Poaceae | Cymbopogon citratus |
Dilleniaceae | Curatella americana | Primulaceae | Clavija weberbaueri |
Euphorbiaceae | Jatropha curcas | Rosaceae | Rosa damascena |
Ricinus communis | Rutaceae | Citrus × aurantium | |
Fabaceae | Bauhinia variegata | Citrus limon | |
Copaifera duckei | Citrus reticulata | ||
Ononis natrix | Citrus sinensis | ||
Geraniaceae | Pelargonium zonale | Salicaceae | Banara guianensis |
Lamiaceae | Ajuga chamaepitys | Banara nitida | |
Mentha spicata | Mayna parvifolia | ||
Ocimum basilicum | Ryania speciosa | ||
Ocimum gratissimum | Sapotaceae | Argania spinosa | |
Thymbra capitata | Simmondsiaceae | Simmondsia chinensis | |
Thymus vulgaris | Siparunaceae | Siparuna poeppigii | |
Zataria multiflora | Solanaceae | Nicotiana sp. | |
Lythraceae | Lawsonia inermis | Tropaeolaceae | Tropaeolum majus |
Urticaceae | Urtica dioica | ||
Zingiberaceae | Elettaria cardamomum |
Pesticidal Plant | Targeted Spodoptera Species | Plant to Be Protected |
---|---|---|
Azadirachta indica | Spodoptera frugiperda | Zea mays |
Spodoptera littoralis | Abelmoschus esculentus | |
Brassica oleracea | ||
Croton macrostachyus | Spodoptera frugiperda | Zea mays |
Curcuma longa | ||
Cymbopogon martini | ||
Dysphania ambrosioides | ||
Eucalyptus globulus | ||
Jatropha curcas | ||
Juniperus communis | ||
Lantana camara | ||
Limnanthes alba | ||
Melaleuca alternifolia | ||
Millettia ferruginea | ||
Nicotiana tabacum | ||
Phytolacca dodecandra | ||
Schinus molle | ||
Syzygium aromaticum | ||
Trichilia casaretti | ||
Trichilia catigua | ||
Trichilia claussenii | ||
Trichilia elegans | ||
Trichilia pallens | ||
Trichilia pallida | ||
Carica papaya | Spodoptera littoralis | Abelmoschus esculentus |
Brassica oleracea | ||
Dioscorea dumetorum | Spodoptera littoralis | Gossypium hirsutum |
Vincetoxicum canescens | Solanum lycopersicum | |
Vincetoxicum fuscatum | ||
Vincetoxicum parviflorum | ||
Wollastonia dentata | Spodoptera litura | Ricinus communis |
Capsicum spp. | Spodoptera spp. | Zea mays |
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Silvie, P.J.; Martin, P.; Huchard, M.; Keip, P.; Gutierrez, A.; Sarter, S. Prototyping a Knowledge-Based System to Identify Botanical Extracts for Plant Health in Sub-Saharan Africa. Plants 2021, 10, 896. https://doi.org/10.3390/plants10050896
Silvie PJ, Martin P, Huchard M, Keip P, Gutierrez A, Sarter S. Prototyping a Knowledge-Based System to Identify Botanical Extracts for Plant Health in Sub-Saharan Africa. Plants. 2021; 10(5):896. https://doi.org/10.3390/plants10050896
Chicago/Turabian StyleSilvie, Pierre J., Pierre Martin, Marianne Huchard, Priscilla Keip, Alain Gutierrez, and Samira Sarter. 2021. "Prototyping a Knowledge-Based System to Identify Botanical Extracts for Plant Health in Sub-Saharan Africa" Plants 10, no. 5: 896. https://doi.org/10.3390/plants10050896
APA StyleSilvie, P. J., Martin, P., Huchard, M., Keip, P., Gutierrez, A., & Sarter, S. (2021). Prototyping a Knowledge-Based System to Identify Botanical Extracts for Plant Health in Sub-Saharan Africa. Plants, 10(5), 896. https://doi.org/10.3390/plants10050896