Four New Species of Dictyostelids from Soil Systems in Northern Thailand
Abstract
:1. Introduction
2. Materials and Methods
2.1. Sampling
2.2. Isolation and Cultivation
2.3. Morphological Observations
2.4. DNA Isolation, PCR Amplification and Sequencing
2.5. Phylogenetic Analysis
2.6. Data Availability
3. Results
Taxonomy and Phylogeny
4. Discussion
Supplementary Materials
Author Contributions
Funding
Institutional Review Board Statement
Informed Consent Statement
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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Taxon | Isolate No. | Accession No. |
---|---|---|
Cavenderia amphispora | BM9A | HQ141521.1 |
C. antarctica | NZ43B | AM168080.1 |
C. aureostabilis | ALP-2018a | MH745571.1 |
C.aureostipes | B15A | KF662199.1 |
C. aureostipes | YA6 | AM168083.1 |
C. aureostipes | OH396 | KF662201.1 |
C. aureostipes var. helvetia | HM592 | KF662214.1 |
C. basinodulosa | ALP-2019a | MN338955.1 |
C. bifurcata | UK5 | AM168084.1 |
C. bhumiboliana | THC11X | HQ141523.1 |
C. boomerangispora | K26B | HQ141520.1 |
C. canoespora | ALP-2019b | MN338956.1 |
C. delicata | TNS-C-226 | AM168093.1 |
C. deminutiva | MexM19A | AM168092.1 |
C. exigua | TNS-C-199 | AM168085.1 |
C. fasciculata | SH3 | AM168087.1 |
C. fasciculata | SmokOW9A | AM168086.1 |
C. fasciculoidea | Cavender Puelo 1B | GQ496157.1 |
C. granulophora | CHII-4 | AM168072.1 |
C. helicoidea | TH19B | OM677255 |
C. macrocarpa | MGE2 | HQ141519.1 |
C. medusoides | OH592 | AM168088.1 |
C. mexicana | MexTF4B1 | AM168089.1 |
C. microspora | TNS-C-38 | AM168090.1 |
C. multistipes | UK26b | AM168070.1 |
C. myxobasis | NT2A | HQ141522.1 |
C. parvibrachiata | TH20C | OM677256 |
C. parvibrachiata | 2019TH20C | OM677257 |
C. parvispora | OS126 | AM168091.1 |
C. protodigitata | ALP-2018b | MH745572.1 |
C. protumula | TH20A | OM677258 |
C. pseudoaureostipes | TH39A | HQ141518.1 |
C. sp. | TAS30A | HQ141516.1 |
C. stellata | SAB7B | AM168081.1 |
C. subdiscoidea | TH1A | HQ141515.1 |
C. ungulata | TH18B | OM677259 |
Dictyostelium brefeldianum | TNS-C-115 | AM168030.1 |
D. macrocephalum | B33 | AM168049.1 |
D. medium | TNS-C-205 | AM168050.1 |
D. mucoroides | sweden 20 | HQ141482.1 |
Species | Sorocarp | Sorophore | Sorophore Cell | Sorocarp Size (mm) | Base | Base Size | Tip | Tip Size | Branch | Sorous | Spore | Polar Granule | Aggregation | Yellow Pigmentation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cavenderia aureostabilis | prone | slender to curved | L | Disk, round to clavate | S–L | unfinished capitate or small irregular cells | L | M | M–L | consolidated irregular | Radiate | Intense | ||
C. aureostipes | erect | crowded | M | Round-irregular | M | M | >20 | M | M | conspicuous | Polysphondylium violaceum type | Strong | ||
C. bhumiboliana | prone | uneven, irregular | one tier | S | clavate, curved or not | L | Flexuous, piliform or round | L | 1–4 | S | L | prominent and large consolidated | Mounds | Fades |
C. helicoidea | prone | one to several tiers | S | clavate to round | S–M | acuminate or piliform | S | a few | S–L | L | irregular consolidated | Radiate or taking the shape of irregular mounds | Fades | |
C. parvibrachiata | Erect to prostrate | slender | one or two tiers | S–L | round, clavate or curved hook-shaped | S–M | obtuse, capitate or clavate | S–M | Unbranched or irregular | S–L | M–L | pronounced consolidated polar-subpolar | Radiate | |
C. protodigitata | Erect to prone | uneven | one tier | S | Clavate-digitate | S | piliform filaments or irregularly capitate | S | unbranched or secondary branched | S | S-M | two unequal medium to large consolidated, regular | Mounds | Fades |
C. protumula | Erect | one to several tiers | S–L | clavate or round | M–L | obutuse, capitate | S–M | 0–2 | S–L | M–L | + | Radiate | ||
C. ungulata | erect to prone | very irregular, uneven | one or two tiers | S–M | claw-like clavate | S | variable, obtuse to acuminate or clavate | M | unbranched but sometimes with 1–5 | S–L | S–L | large regular (2 µm) | Radiate |
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Cavender, J.C.; Vadell, E.M.; Perrigo, A.L.; Landolt, J.C.; Stephenson, S.L.; Liu, P. Four New Species of Dictyostelids from Soil Systems in Northern Thailand. J. Fungi 2022, 8, 593. https://doi.org/10.3390/jof8060593
Cavender JC, Vadell EM, Perrigo AL, Landolt JC, Stephenson SL, Liu P. Four New Species of Dictyostelids from Soil Systems in Northern Thailand. Journal of Fungi. 2022; 8(6):593. https://doi.org/10.3390/jof8060593
Chicago/Turabian StyleCavender, James C., Eduardo M. Vadell, Allison L. Perrigo, John C. Landolt, Steven L. Stephenson, and Pu Liu. 2022. "Four New Species of Dictyostelids from Soil Systems in Northern Thailand" Journal of Fungi 8, no. 6: 593. https://doi.org/10.3390/jof8060593
APA StyleCavender, J. C., Vadell, E. M., Perrigo, A. L., Landolt, J. C., Stephenson, S. L., & Liu, P. (2022). Four New Species of Dictyostelids from Soil Systems in Northern Thailand. Journal of Fungi, 8(6), 593. https://doi.org/10.3390/jof8060593