Mitochondrial Genetics and Pathologies

A special issue of Biomedicines (ISSN 2227-9059). This special issue belongs to the section "Cell Biology and Pathology".

Deadline for manuscript submissions: closed (31 January 2023) | Viewed by 18202

Special Issue Editors


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Guest Editor
UMR Genetique Moleculaire, Genomique, Microbiologie (GMGM), Strasbourg University—CNRS, 67084 Strasbourg, France
Interests: mitochondrial genetics; tRNA; ribosomes; cross-talk between nucleus and mitochondria; noncoding RNA; mitochondrial pathologies

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Guest Editor
Department of Anesthesiology & Critical Care Medicine, Cardiovascular Division, Department of Pathology, Johns Hopkins School of Medicine, Baltimore, MD 21205, USA
Interests: obesity; cardiovascular health; muscle cell biology; mitochondrial DNA; microRNA

Special Issue Information

Dear Colleagues,

Mitochondria are known as the powerhouse of the cell by producing ATP through oxidative phosphorylation. Mitochondria are surrounded by double layered membranes, and harbor many other metabolic pathways, such as β-oxidation, synthesis of amino acids, cholesterol and Fe-S clusters, ROS-mediated signaling and intracellular calcium homeostasis, among many. Furthermore, mitochondria regulate numerous physiological processes, such as autophagy, apoptosis, stress response, aging, oncogenesis, and myogenesis.

Mitochondria have its own genome that encode several key proteins of the oxidative phosphorylation complexes. However, the vast majority of functioning proteins located inside the mitochondria are synthesized in the cytosol followed by translocate into the mitochondria. Various mutation/deletion, including SNPs, in human mitochondrial DNA leads to severe defects of cellular respiration that causes many diseases, including muscular or neurodegenerative, called “mtDNA diseases”. Mutations in nuclear genes that encode mitochondrial proteins or factors involved in mitochondrial dynamics, can also be associated with mitochondrial dysfunctions and common diseases, such as cancer, cardiovascular disorders, diabetes, amyotrophic lateral sclerosis, Alzheimer's and Parkinson's disease.

This exciting and novel topic aims to bring together studies on various disorders associated with mitochondrial dysfunctions that may expand our knowledge of the role of mitochondria and aid in the development of potential therapeutic strategies.

The scope of the journal includes, but is not limited to:

  • Gene regulation at the transcriptional and posttranscriptional levels.
  • Mitochondrial DNA mutation/deletion/SNPs in human diseases.
  • Mitochondrial genome editing technologies.
  • Mitochondrial RNA biology.
  • Mitochondrial non-coding RNA and human diseases.
  • Mitochondrial epigenetics and human diseases.
  • Mitochondrial gene therapy.
  • RNA interference.
  • Drug development.

Dr. Nina Entelis
Dr. Samirjit Das
Guest Editors

Manuscript Submission Information

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Keywords

  • human mitochondria
  • mtDNA
  • pathogenic mutations
  • mitochondrial dysfunctions
  • mitochondrial diseases

Published Papers (4 papers)

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Research

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23 pages, 4749 KiB  
Article
Glutamate-Induced Deregulation of Krebs Cycle in Mitochondrial Encephalopathy Lactic Acidosis Syndrome Stroke-Like Episodes (MELAS) Syndrome Is Alleviated by Ketone Body Exposure
by Sophie Belal, David Goudenège, Cinzia Bocca, Florent Dumont, Juan Manuel Chao De La Barca, Valérie Desquiret-Dumas, Naïg Gueguen, Guillaume Geffroy, Rayane Benyahia, Selma Kane, Salim Khiati, Céline Bris, Tamas Aranyi, Daniel Stockholm, Aurore Inisan, Aurélie Renaud, Magalie Barth, Gilles Simard, Pascal Reynier, Franck Letournel, Guy Lenaers, Dominique Bonneau, Arnaud Chevrollier and Vincent Procaccioadd Show full author list remove Hide full author list
Biomedicines 2022, 10(7), 1665; https://doi.org/10.3390/biomedicines10071665 - 11 Jul 2022
Cited by 7 | Viewed by 2595
Abstract
(1) Background: The development of mitochondrial medicine has been severely impeded by a lack of effective therapies. (2) Methods: To better understand Mitochondrial Encephalopathy Lactic Acidosis Syndrome Stroke-like episodes (MELAS) syndrome, neuronal cybrid cells carrying different mutation loads of the m.3243A > G [...] Read more.
(1) Background: The development of mitochondrial medicine has been severely impeded by a lack of effective therapies. (2) Methods: To better understand Mitochondrial Encephalopathy Lactic Acidosis Syndrome Stroke-like episodes (MELAS) syndrome, neuronal cybrid cells carrying different mutation loads of the m.3243A > G mitochondrial DNA variant were analysed using a multi-omic approach. (3) Results: Specific metabolomic signatures revealed that the glutamate pathway was significantly increased in MELAS cells with a direct correlation between glutamate concentration and the m.3243A > G heteroplasmy level. Transcriptomic analysis in mutant cells further revealed alterations in specific gene clusters, including those of the glutamate, gamma-aminobutyric acid pathways, and tricarboxylic acid (TCA) cycle. These results were supported by post-mortem brain tissue analysis from a MELAS patient, confirming the glutamate dysregulation. Exposure of MELAS cells to ketone bodies significantly reduced the glutamate level and improved mitochondrial functions, reducing the accumulation of several intermediate metabolites of the TCA cycle and alleviating the NADH-redox imbalance. (4) Conclusions: Thus, a multi-omic integrated approach to MELAS cells revealed glutamate as a promising disease biomarker, while also indicating that a ketogenic diet should be tested in MELAS patients. Full article
(This article belongs to the Special Issue Mitochondrial Genetics and Pathologies)
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Review

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28 pages, 1459 KiB  
Review
Creation of Mitochondrial Disease Models Using Mitochondrial DNA Editing
by Victoria A. Khotina, Andrey Y. Vinokurov, Mariam Bagheri Ekta, Vasily N. Sukhorukov and Alexander N. Orekhov
Biomedicines 2023, 11(2), 532; https://doi.org/10.3390/biomedicines11020532 - 12 Feb 2023
Cited by 7 | Viewed by 5178
Abstract
Mitochondrial diseases are a large class of human hereditary diseases, accompanied by the dysfunction of mitochondria and the disruption of cellular energy synthesis, that affect various tissues and organ systems. Mitochondrial DNA mutation-caused disorders are difficult to study because of the insufficient number [...] Read more.
Mitochondrial diseases are a large class of human hereditary diseases, accompanied by the dysfunction of mitochondria and the disruption of cellular energy synthesis, that affect various tissues and organ systems. Mitochondrial DNA mutation-caused disorders are difficult to study because of the insufficient number of clinical cases and the challenges of creating appropriate models. There are many cellular models of mitochondrial diseases, but their application has a number of limitations. The most proper and promising models of mitochondrial diseases are animal models, which, unfortunately, are quite rare and more difficult to develop. The challenges mainly arise from the structural features of mitochondria, which complicate the genetic editing of mitochondrial DNA. This review is devoted to discussing animal models of human mitochondrial diseases and recently developed approaches used to create them. Furthermore, this review discusses mitochondrial diseases and studies of metabolic disorders caused by the mitochondrial DNA mutations underlying these diseases. Full article
(This article belongs to the Special Issue Mitochondrial Genetics and Pathologies)
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21 pages, 2272 KiB  
Review
Succinate Dehydrogenase, Succinate, and Superoxides: A Genetic, Epigenetic, Metabolic, Environmental Explosive Crossroad
by Paule Bénit, Judith Goncalves, Riyad El Khoury, Malgorzata Rak, Judith Favier, Anne-Paule Gimenez-Roqueplo and Pierre Rustin
Biomedicines 2022, 10(8), 1788; https://doi.org/10.3390/biomedicines10081788 - 25 Jul 2022
Cited by 9 | Viewed by 4952
Abstract
Research focused on succinate dehydrogenase (SDH) and its substrate, succinate, culminated in the 1950s accompanying the rapid development of research dedicated to bioenergetics and intermediary metabolism. This allowed researchers to uncover the implication of SDH in both the mitochondrial respiratory chain and the [...] Read more.
Research focused on succinate dehydrogenase (SDH) and its substrate, succinate, culminated in the 1950s accompanying the rapid development of research dedicated to bioenergetics and intermediary metabolism. This allowed researchers to uncover the implication of SDH in both the mitochondrial respiratory chain and the Krebs cycle. Nowadays, this theme is experiencing a real revival following the discovery of the role of SDH and succinate in a subset of tumors and cancers in humans. The aim of this review is to enlighten the many questions yet unanswered, ranging from fundamental to clinically oriented aspects, up to the danger of the current use of SDH as a target for a subclass of pesticides. Full article
(This article belongs to the Special Issue Mitochondrial Genetics and Pathologies)
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22 pages, 1127 KiB  
Review
The Mitochondrial Genome in Aging and Disease and the Future of Mitochondrial Therapeutics
by Sanjana Saravanan, Caitlin J. Lewis, Bhavna Dixit, Matthew S. O’Connor, Alexandra Stolzing and Amutha Boominathan
Biomedicines 2022, 10(2), 490; https://doi.org/10.3390/biomedicines10020490 - 18 Feb 2022
Cited by 4 | Viewed by 4655
Abstract
Mitochondria are intracellular organelles that utilize nutrients to generate energy in the form of ATP by oxidative phosphorylation. Mitochondrial DNA (mtDNA) in humans is a 16,569 base pair double-stranded circular DNA that encodes for 13 vital proteins of the electron transport chain. Our [...] Read more.
Mitochondria are intracellular organelles that utilize nutrients to generate energy in the form of ATP by oxidative phosphorylation. Mitochondrial DNA (mtDNA) in humans is a 16,569 base pair double-stranded circular DNA that encodes for 13 vital proteins of the electron transport chain. Our understanding of the mitochondrial genome’s transcription, translation, and maintenance is still emerging, and human pathologies caused by mtDNA dysfunction are widely observed. Additionally, a correlation between declining mitochondrial DNA quality and copy number with organelle dysfunction in aging is well-documented in the literature. Despite tremendous advancements in nuclear gene-editing technologies and their value in translational avenues, our ability to edit mitochondrial DNA is still limited. In this review, we discuss the current therapeutic landscape in addressing the various pathologies that result from mtDNA mutations. We further evaluate existing gene therapy efforts, particularly allotopic expression and its potential to become an indispensable tool for restoring mitochondrial health in disease and aging. Full article
(This article belongs to the Special Issue Mitochondrial Genetics and Pathologies)
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