Tumor Heterogeneity and Resistance to Cancer Therapies

A special issue of Biomedicines (ISSN 2227-9059). This special issue belongs to the section "Gene and Cell Therapy".

Deadline for manuscript submissions: closed (30 November 2022) | Viewed by 7776

Special Issue Editor


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Guest Editor
1. Department of Oncology, University of Torino, Candiolo, Italy
2. Candiolo Cancer Institute, FPO–IRCCS, Candiolo, Italy
Interests: colorectal cancers; tumor heterogeneity; clonal evolution;drug-resistance; biomarkers

Special Issue Information

The sequences of cancer genomes and the development of oncogene-specific inhibitors have transformed the clinical treatment of cancer patients into what is commonly known as precision or personalized medicine.

However, it is widely known that each tumor contains a “private” collection of molecular alterations, few of which are shared between patients with the same histopathological subtype. Additionally, intrapatient heterogeneity also exists not only between the primary tumor and metastatic lesions but also between separated regions of the same tumor lesion, in which the coexistence of genetically distinct clonal subpopulations is often observed.

Such a high level of intratumor heterogeneity, indicating branched rather than linear tumor evolution, profoundly affects the efficacy of cancer therapy. When therapies are administered, lesion-specific responses can be observed with resistant subclones, eventually leading to disease progression.

Furthermore, there is clear evidence that therapy reshapes the tumor mutational landscape. Most cancers that initially respond to treatment eventually relapse, with the outgrowth of cancer cells that are genetically and epigenetically different from those that were present at the time of diagnosis.

The critical role of molecular heterogeneity and clonal evolution in the clinical outcomes of cancer patients leads to many clinical and scientific needs:

-Clinical trials, novel technologies, and biomarker studies providing accurate molecular maps of individual tumors and longitudinal analyses of tumor evolution during therapeutic treatment.

- Preclinical models of each patient’s specific disease, allowing for rapid development of the most effective personalized therapy.

- The identification of common (trunk) cell vulnerabilities suitable for therapeutic targeting.

- Innovative therapeutic strategies able to overcome the challenges posed by tumor heterogeneity and to prevent clonal evolution.

Keywords

  • Molecular heterogeneity
  • Clonal evolution
  • Cancer genetics
  • Genetic instability
  • Trunk alterations
  • Branched evolution
  • Drug resistance
  • Lesion-specific response
  • Precision medicine

Published Papers (2 papers)

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15 pages, 4737 KiB  
Article
ALDH1A3 Segregated Expression and Nucleus-Associated Proteasomal Degradation Are Common Traits of Glioblastoma Stem Cells
by Julian Fauß, Bettina Sprang, Petra Leukel, Clemens Sommer, Teodora Nikolova, Florian Ringel and Ella L. Kim
Biomedicines 2022, 10(1), 7; https://doi.org/10.3390/biomedicines10010007 - 22 Dec 2021
Cited by 5 | Viewed by 2776
Abstract
Aldehyde dehydrogenase 1 isoforms A1 and A3 have been implicated as functional biomarkers associated with distinct molecular subtypes of glioblastoma and glioblastoma stem cells. However, the exact roles of these isoforms in different types of glioma cells remain unclear. The purpose of this [...] Read more.
Aldehyde dehydrogenase 1 isoforms A1 and A3 have been implicated as functional biomarkers associated with distinct molecular subtypes of glioblastoma and glioblastoma stem cells. However, the exact roles of these isoforms in different types of glioma cells remain unclear. The purpose of this study was to dissect the association of A1 or A3 isoforms with stem and non-stem glioblastoma cells. This study has undertaken a systematic characterization of A1 and A3 proteins in glioblastoma tissues and a panel of glioblastoma stem cells using immunocytochemical and immunofluorescence staining, Western blot and the subcellular fractionation methodology. Our main findings are (i) human GSCs express uniformly ALDH1A3 but not the ALDH1A1 isoform whereas non-stem glioma cells comparably express both isoforms; (ii) there is an abundance of ALDH1A3 peptides that prevail over the full-length form in glioblastoma stem cells but not in non-stem glioma cells; (iii) full-length ALDH1A3 and ALDH1A3 peptides are spatially segregated within the cell; and (vi) the abundance of full-length ALDH1A3 and ALDH1A3 peptides is sensitive to MG132-mediated proteasomal inhibition. Our study further supports the association of ALDH1A3 with glioblastoma stem cells and provide evidence for the regulation of ALDH1A3 activities at the level of protein turnover. Full article
(This article belongs to the Special Issue Tumor Heterogeneity and Resistance to Cancer Therapies)
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Review

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15 pages, 1561 KiB  
Review
How Lineage Tracing Studies Can Unveil Tumor Heterogeneity in Breast Cancer
by Elena Vinuesa-Pitarch, Daniel Ortega-Álvarez and Verónica Rodilla
Biomedicines 2022, 10(1), 3; https://doi.org/10.3390/biomedicines10010003 - 21 Dec 2021
Cited by 3 | Viewed by 4331
Abstract
Lineage tracing studies have become a well-suited approach to reveal cellular hierarchies and tumor heterogeneity. Cellular heterogeneity, particularly in breast cancer, is still one of the main concerns regarding tumor progression and resistance to anti-cancer therapies. Here, we review the current knowledge about [...] Read more.
Lineage tracing studies have become a well-suited approach to reveal cellular hierarchies and tumor heterogeneity. Cellular heterogeneity, particularly in breast cancer, is still one of the main concerns regarding tumor progression and resistance to anti-cancer therapies. Here, we review the current knowledge about lineage tracing analyses that have contributed to an improved comprehension of the complexity of mammary tumors, highlighting how targeting different mammary epithelial cells and tracing their progeny can be useful to explore the intra- and inter-heterogeneity observed in breast cancer. In addition, we examine the strategies used to identify the cell of origin in different breast cancer subtypes and summarize how cellular plasticity plays an important role during tumorigenesis. Finally, we evaluate the clinical implications of lineage tracing studies and the challenges remaining to address tumor heterogeneity in breast cancer. Full article
(This article belongs to the Special Issue Tumor Heterogeneity and Resistance to Cancer Therapies)
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