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Research on Mitochondrial Genetics and Epigenetics

A special issue of International Journal of Molecular Sciences (ISSN 1422-0067). This special issue belongs to the section "Molecular Biology".

Deadline for manuscript submissions: 30 April 2025 | Viewed by 688

Special Issue Editor


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Guest Editor
Department of Biology and Biotechnologies “C. Darwin”, Sapienza University of Rome, Piazzale Aldo Moro, 5, 00185 Rome, Italy
Interests: mitochondria; mitochondrial mutations; yeast model; C. elegans model; epigenetic regulation

Special Issue Information

Dear Colleagues,

The Special Issue of the International Journal of Molecular Sciences, titled "Research on Mitochondrial Genetics and Epigenetics”, is focused on molecular research regarding the genetics and epigenetics of the mitochondria. Mitochondria are cellular mediators of energy metabolism whose physiology is maintained either by nuclear or mitochondrial gene functions. The peculiar dynamics of mitochondrial (mt)DNA, such as a high mutation rate, the balance between homoplasmy and heteroplasmy, as well as the copy number variability and maintenance, contribute to the complex regulation of the mitochondrial genetics and are associated with the onset of pathological conditions ranging from metabolic alterations to neurodegenerative diseases and cancer.

The crosstalk between nucleus and mitochondria is finely tuned; in particular, alterations in mitochondrial functionality can trigger cellular stress signaling and changes in nuclear gene expression by retrograde regulation. In this scenario, the epigenetic modifications also occurring in mtDNA play an important role in regulating gene expression, influencing the maintenance of cellular health by leading the cellular homeostasis, the oxidative stress responses, and the energy production. Furthermore, non-coding RNAs, both mitochondrially and nuclearly encoded, can be involved in the epigenetic regulation of mitochondrial gene expression, as well as are the modifications of mtDNA-binding proteins within mitochondrial nucleoids.

Dr. Arianna Montanari
Guest Editor

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Keywords

  • mitochondrial DNA dynamics
  • retrograde regulation
  • epigenetic modulators
  • mitochondrial diseases
  • cellular homeostasis

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Published Papers (1 paper)

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Research

20 pages, 1994 KiB  
Article
Impact of Cold Stress on Hepatopancreas Transcriptomic and Metabolomic in Red Swamp Crayfish Procambarus Clarkii
by Xiaochen Zhu, Aidi Peng, Yueying Zou, Yingdong Li, Hua Wei, Xianhu Zheng and Yingying Zhao
Int. J. Mol. Sci. 2025, 26(3), 1221; https://doi.org/10.3390/ijms26031221 - 30 Jan 2025
Viewed by 342
Abstract
The aquaculture industry of red swamp crayfish (RSC), Procambarus clarkii, has grown significantly in recent decades due to increasing market demand. In China, low water temperatures, particularly during overwintering, pose a challenge, hindering the development of the RSC aquaculture industry in northern [...] Read more.
The aquaculture industry of red swamp crayfish (RSC), Procambarus clarkii, has grown significantly in recent decades due to increasing market demand. In China, low water temperatures, particularly during overwintering, pose a challenge, hindering the development of the RSC aquaculture industry in northern regions. Understanding the molecular mechanism of RSCs’ responses to cold stress could be beneficial for its aquaculture practices. In this study, we exposed RSCs to 4 °C (T4) and 22 °C (T22: control) for 96 h. Transcriptomic and metabolomic analyses of hepatopancreas tissues were performed to identify key genes and metabolites that participate in cold stress response. A total of 787 differentially expressed genes (DEGs) and 198 differentially expressed metabolites (DEMs) were identified between T4 and T22. DEGs were significantly enriched in KEGG pathways related to carbohydrate, lipid, amino acid, and nucleotide metabolism, immunity, and signaling, while DEMs were significantly enriched in pathways associated with lipid and amino acid metabolism and membrane transport. The results indicated that cold stress altered RSCs’ metabolism and their innate immune system. This study provides valuable information to increase our understanding of cold stress responses in RSCs. Full article
(This article belongs to the Special Issue Research on Mitochondrial Genetics and Epigenetics)
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