Taxonomy, Systematics and Evolution of Forestry Fungi, 2nd Edition

A special issue of Journal of Fungi (ISSN 2309-608X). This special issue belongs to the section "Fungal Evolution, Biodiversity and Systematics".

Deadline for manuscript submissions: 31 March 2025 | Viewed by 8870

Special Issue Editors


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Guest Editor
College of Forestry, Beijing Forestry University, Beijing, China
Interests: forest pathogens (fungi); fungal diversity; fungal phylogeny; taxonomy of ascomycetes
Special Issues, Collections and Topics in MDPI journals

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Guest Editor
Setor de Micologia, Departamento de Biociências e Tecnologia, Instituto de Patologia Tropical e Saúde Pública, Universidade Federal de Goiás, Goiânia, Brazil
Interests: fusarium; endophytic fungi; fungal systematics and biogeography
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

The forest ecosystems play a vital role in the global ecology. Fungi are important members of forest ecosystems and perform a number of essential functions (plant pathogens and endophytes, saprophytes, mycorrhizae, and other lifestyles). During the past decade, there have been several studies on the diversity of forest fungi. To date, only around 150,000 fungal species have been described globally. However, It is estimated that the number of fungal species ranges from 2.2 to 3.8 million based on host association, and from 11.7 to 13.2 million species using high-throughput sequencing. Therefore, there are a high number of species that have yet to be described from the forest ecosystems and globally.

This Special Issue, entitled “Taxonomy, Systematics and Evolution of Forestry Fungi”, is focused on all kinds of fungi in forests, with a particular focus on their diversity, molecular phylogeny, and evolution. Both reviews and research articles are welcome; papers that address ecologically important groups (e.g., phytopathogenetic fungi) are especially appreciated.

Dr. Xinlei Fan
Dr. Jadson Diogo Pereira Bezerra
Guest Editors

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Keywords

  • evolution
  • forestry fungi
  • morphology
  • novel taxa
  • phylogeny

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Related Special Issue

Published Papers (8 papers)

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Research

20 pages, 6715 KiB  
Article
Phylogenetic Insights Reveal New Taxa in Thyridariaceae and Massarinaceae
by Wen-Hui Tian, Yan Jin, Yue-Chi Liao, Turki KH. Faraj, Xin-Yong Guo and Sajeewa S. N. Maharachchikumbura
J. Fungi 2024, 10(8), 542; https://doi.org/10.3390/jof10080542 - 2 Aug 2024
Viewed by 402
Abstract
Pleosporales is a highly diverse (and the largest) order in Dothideomycetes, and it is widespread in decaying plants in various environments around the world. During a survey of fungal diversity in Sichuan Province, China, specimens of hyphomycetous and Thyridaria-like fungi were collected [...] Read more.
Pleosporales is a highly diverse (and the largest) order in Dothideomycetes, and it is widespread in decaying plants in various environments around the world. During a survey of fungal diversity in Sichuan Province, China, specimens of hyphomycetous and Thyridaria-like fungi were collected from dead branches of pine trees and cherry trees. These taxa were initially identified as members of Massarinaceae and Thyridariaceae through morphological examination. Phylogenetic analyses of the Thyridariaceae, combining ITS, SSU, LSU, RPB2, and TEF1 sequence data, indicated a distinct clade sister to Pseudothyridariella and Thyridariella, distinct from any genus in the family. Thus, a new genus, Vaginospora, is proposed to accommodate the type species Vaginospora sichuanensis, which is characterized by semi-immersed globose to oblong ascomata with an ostiolar neck, cylindrical to clavate asci with an ocular chamber, and hyaline to dark brown, fusiform, 3–5-transversely septate ascospores with an inconspicuous mucilaginous sheath. Based on the morphological comparisons and multi-locus phylogenetic analyses (ITS, SSU, LSU, RPB2, and TEF1) of the Massarinaceae, we have identified three collections belonging to the genus Helminthosporium, leading us to propose H. filamentosa sp. nov., H. pini sp. nov., and H. velutinum as a new host record. According to Phylogenetic analysis, H. pini formed an independent clade sister to H. austriacum and H. yunnanense, and H. filamentosa represents the closest sister clade to H. quercinum. Helminthosporium pini is distinct from H. austriacum by the shorter conidiophores and H. yunnanense by the longer and wider conidia. The H. filamentosa differs from H. quercinum in having longer conidiophores and smaller conidia. This study extends our understanding of diversity within Thyridariaceae and Helminthosporium. Our findings underscore the rich biodiversity and potential for discovering novel fungal taxa within these groups. Full article
(This article belongs to the Special Issue Taxonomy, Systematics and Evolution of Forestry Fungi, 2nd Edition)
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14 pages, 5645 KiB  
Article
Updating the Species Diversity of Pestalotioid Fungi: Four New Species of Neopestalotiopsis and Pestalotiopsis
by Weishan Zhang, Yixuan Li, Lu Lin, Aoli Jia and Xinlei Fan
J. Fungi 2024, 10(7), 475; https://doi.org/10.3390/jof10070475 - 11 Jul 2024
Viewed by 684
Abstract
Pestalotioid fungi are associated with a wide variety of plants around the world as pathogens, endophytes, and saprobes. In this study, diseased leaves and branches of plants were collected from Guizhou and Sichuan in China. Here, the fungal isolates were identified based on [...] Read more.
Pestalotioid fungi are associated with a wide variety of plants around the world as pathogens, endophytes, and saprobes. In this study, diseased leaves and branches of plants were collected from Guizhou and Sichuan in China. Here, the fungal isolates were identified based on a phylogenetic analysis of the internal transcribed spacer region (ITS), the translation elongation factor 1-alpha (tef1-α) and the beta-tubulin (tub2) of ribosomal DNA, and the morphological characteristics. Ten Neopestalotiopsis isolates and two Pestalotiopsis isolates were obtained, and these isolates were further confirmed as four novel species (N. acericola, N. cercidicola, N. phoenicis, and P. guiyangensis) and one known species, N. concentrica. Full article
(This article belongs to the Special Issue Taxonomy, Systematics and Evolution of Forestry Fungi, 2nd Edition)
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35 pages, 36488 KiB  
Article
Revealing Brownish Mycena Diversity in China: New Discoveries and Taxonomic Insights
by Renxiu Wei, Yupeng Ge, Liangliang Qi, Menghui Han, Hui Zeng, Yaping Hu, Li Zou, Xianhao Cheng, Xiaoming Wu and Qin Na
J. Fungi 2024, 10(6), 439; https://doi.org/10.3390/jof10060439 - 20 Jun 2024
Cited by 1 | Viewed by 621
Abstract
Within the genus Mycena, species exhibiting brownish basidiomata present considerable challenges in identification due to similar coloration. This study underscores the significance of pileipellis types and cheilocystidia characteristics as critical in delimiting brownish Mycena species. To clarify the principal taxonomic characters and [...] Read more.
Within the genus Mycena, species exhibiting brownish basidiomata present considerable challenges in identification due to similar coloration. This study underscores the significance of pileipellis types and cheilocystidia characteristics as critical in delimiting brownish Mycena species. To clarify the principal taxonomic characters and their utility in distinguishing between brownish Mycena species, a morphological taxonomy and phylogenetic analysis were performed. Five new species from China were introduced and characterized through a comprehensive morphological anatomy and phylogenetic substantiation: M. campanulatihemisphaerica sp. nov., M. digitifurcata sp. nov., M. kunyuensis sp. nov., M. limitis sp. nov., and M. oryzifluens sp. nov. Discussions of these taxa are supplemented with morphological illustrations. The phylogenetic relationships were inferred using Bayesian Inference and Maximum Likelihood methods based on sequences from the internal transcribed spacer and the large subunit regions of nuclear ribosomal RNA. With the addition of these five new species, the worldwide count of brownish Mycena increases to 94, and a key to the 29 known species of brownish Mycena from China is presented. Full article
(This article belongs to the Special Issue Taxonomy, Systematics and Evolution of Forestry Fungi, 2nd Edition)
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47 pages, 14175 KiB  
Article
A Taxonomic and Phylogenetic Contribution on Inosperma Section Inosperma (Agaricales, Inocybaceae) in Europe: Calamistratum and Geraniodorum Groups
by Fernando Esteve-Raventós, Ellen Larsson, Fermín Pancorbo, Enrico Bizio, Alberto Altés, Yolanda Turégano, Gabriel Moreno and Ibai Olariaga
J. Fungi 2024, 10(6), 374; https://doi.org/10.3390/jof10060374 - 23 May 2024
Viewed by 1419
Abstract
The aim of this study is to carry out a taxonomic revision of the groups Calamistratum and Geraniodorum of the genus Inosperma sect. Inosperma in Europe. For this purpose, a multigenic phylogenetic analysis was carried out using the ITS, LSU, RPB1 and RPB2 [...] Read more.
The aim of this study is to carry out a taxonomic revision of the groups Calamistratum and Geraniodorum of the genus Inosperma sect. Inosperma in Europe. For this purpose, a multigenic phylogenetic analysis was carried out using the ITS, LSU, RPB1 and RPB2 markers, covering a total of 111 sequences, including those generated from the existing type-material collections. This analysis led to the recognition of nine clades or terminal groups for the European continent, correlating with nine morphological species. Three of them, I. calamistratum, I. neohirsutum sp. nov. and I. turietoense sp. nov., are distributed in humid and temperate forests, whereas I. geminum sp. nov., I. geraniodorum, I. gracilentum sp. nov., I. praetermissum comb. nov., I. subhirsutum and I. veliferum seem to be restricted to the colder altimontane, boreal and alpine climates. It is concluded that the study of morphological and ecological characteristics allows the recognition of species without the need for an often-subjective interpretation of organoleptic characteristics. Inocybe hirsuta is considered a synonym of Inosperma calamistratum, Inosperma praetermissum as a different species from I. calamistratum, and Inocybe geraniodora var. gracilenta f. salicis-herbaceae as a synonym of I. praetermissum. Four new species and one new combination are proposed. A key for the recognition of the European species is provided. Illustrations and photographs of macro- and micromorphological characters and SEM spores of all species are presented. Full article
(This article belongs to the Special Issue Taxonomy, Systematics and Evolution of Forestry Fungi, 2nd Edition)
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19 pages, 3595 KiB  
Article
Four New Species and a New Combination of Boletaceae (Boletales) from Subtropical and Tropical China
by Rou Xue, Lin-Jie Su, Tai-Jie Yu, Chang Xu, Hong-Yan Huang, Nian-Kai Zeng, Guo-Li Zhang and Li-Ping Tang
J. Fungi 2024, 10(5), 348; https://doi.org/10.3390/jof10050348 - 13 May 2024
Viewed by 1239
Abstract
Previous studies have shown that boletes are abundant and diverse in China, especially in tropical and subtropical regions. In the present study, morphological, ecological, host relationship, and a four-locus (28S, tef1, rpb1, and rpb2) molecular phylogenetic analyses were used to [...] Read more.
Previous studies have shown that boletes are abundant and diverse in China, especially in tropical and subtropical regions. In the present study, morphological, ecological, host relationship, and a four-locus (28S, tef1, rpb1, and rpb2) molecular phylogenetic analyses were used to study the family Boletaceae in subtropical and tropical China. Four new bluing species are described from three genera, viz. Boletellus verruculosus (Chinese name疣柄条孢牛肝菌), Xerocomellus tenuis (Chinese name细柄红绒盖牛肝菌), Xer. brunneus (Chinese name褐盖红绒盖牛肝菌), and Xerocomus zhangii (Chinese name张氏绒盖牛肝菌). Moreover, the genus Nigroboletus is treated as a synonym of Xerocomellus, and a new combination, namely Xer. roseonigrescens (Chinese name玫瑰红绒盖牛肝菌), is proposed. Full article
(This article belongs to the Special Issue Taxonomy, Systematics and Evolution of Forestry Fungi, 2nd Edition)
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24 pages, 15627 KiB  
Article
New Data on Boletaceae (Agaricomycetes, Basidiomycota) from Central Vietnam with Description of Two New Species and Creation of a New Combination Based on Morphological and Phylogenetic Evidence
by Thi Ha Giang Pham, Eugene Popov, Alina Alexandrova, Daria Ivanova and Olga Morozova
J. Fungi 2024, 10(3), 223; https://doi.org/10.3390/jof10030223 - 19 Mar 2024
Viewed by 1297
Abstract
Two new species of Boletaceae (Hortiboletus rubroreticulatus and Tylopilus aurantiovulpinus) discovered during an investigation of the mycobiota of Central Vietnam (Kon Chu Rang Nature Reserve; Ta Dung National Park; Bidoup—Nui Ba National Park; Kon Ka Kinh National Park) are described on [...] Read more.
Two new species of Boletaceae (Hortiboletus rubroreticulatus and Tylopilus aurantiovulpinus) discovered during an investigation of the mycobiota of Central Vietnam (Kon Chu Rang Nature Reserve; Ta Dung National Park; Bidoup—Nui Ba National Park; Kon Ka Kinh National Park) are described on the basis of molecular and morphological data. Illustrated descriptions of their macro- and microscopic features and discussion on similar taxa are given. Additionally, eight species which were recorded for the first time in Vietnam are listed and illustrated here. A new combination Kgaria virescens was made for one of these species. These results were confirmed by the phylogenetic analysis based on nrITS1-5.8S-ITS2, nrLSU, and tef1α regions. Full article
(This article belongs to the Special Issue Taxonomy, Systematics and Evolution of Forestry Fungi, 2nd Edition)
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22 pages, 13875 KiB  
Article
Phylogenetic and Taxonomic Analyses of Five New Wood-Inhabiting Fungi of Botryobasidium, Coltricia and Coltriciella (Basidiomycota) from China
by Qian Zhou, Qianquan Jiang, Xin Yang, Jiawei Yang, Changlin Zhao and Jian Zhao
J. Fungi 2024, 10(3), 205; https://doi.org/10.3390/jof10030205 - 8 Mar 2024
Viewed by 1258
Abstract
In this present study, five new wood-inhabiting fungal taxa, Botryobasidium gossypirubiginosum, Botryobasidium incanum, Botryobasidium yunnanense, Coltricia zixishanensis, and Coltriciella yunnanensis are proposed. Botryobasidium gossypirubiginosum is distinguished by its slightly rubiginous hymenial surface, monomitic hyphal system, which branches at right angles, and [...] Read more.
In this present study, five new wood-inhabiting fungal taxa, Botryobasidium gossypirubiginosum, Botryobasidium incanum, Botryobasidium yunnanense, Coltricia zixishanensis, and Coltriciella yunnanensis are proposed. Botryobasidium gossypirubiginosum is distinguished by its slightly rubiginous hymenial surface, monomitic hyphal system, which branches at right angles, and subglobose, smooth basidiospores (14–17.5 × 13–15.5 µm); B. incanum is characterized by its white to incanus basidiomata having a hypochnoid hymenial surface, and ellipsoid, smooth basidiospores (6.5–8.5 × 3.5–5 µm); B. yunnanense is characterized by its buff to slightly yellowish hymenial surface, monomitic hyphal system, and broadly ellipsoid to globose, smooth, thick-walled basidiospores (11.5–14.5 × 9.5–10.5 µm); Coltricia zixishanensis differs in its rust brown pileal surface, and ellipsoid, thick-walled basidiospores (5–6.5 × 4–4.5 µm). Coltriciella yunnanensis is distinguished by its tiny pilei, short stipe, and navicular, verrucose basidiospores (10.5–12.5 × 6–7 µm). Sequences of ITS and nLSU genes were used for phylogenetic analyses using the maximum likelihood, maximum parsimony, and Bayesian inference methods. The phylogenetic results inferred from ITS sequences revealed that B. gossypirubiginosum was closely related to B. robustius; the species B. incanum was grouped with B. vagum; B. yunnanense was related to B. indicum. The species C. zixishanensis was grouped with C. confluens and C. perennis. ITS sequences revealed that C. zixishanensis was grouped into the genus Coltriciella, in which it was grouped with Co. globosa and Co. pseudodependens. Full article
(This article belongs to the Special Issue Taxonomy, Systematics and Evolution of Forestry Fungi, 2nd Edition)
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15 pages, 12644 KiB  
Article
Umbellaceae fam. nov. (Hymenochaetales, Basidiomycota) for Umbellus sinensis gen. et sp. nov. and Three New Combinations
by Xue-Wei Wang and Li-Wei Zhou
J. Fungi 2024, 10(1), 22; https://doi.org/10.3390/jof10010022 - 28 Dec 2023
Cited by 1 | Viewed by 1226
Abstract
Hymenochaetales, belonging to Agaricomycetes, Basidiomycota, comprises most polypores and corticioid fungi and, also, a few agarics. The latest taxonomic framework accepts 14 families in this order. When further exploring species diversity of Hymenochaetales, two corticioid specimens collected from China [...] Read more.
Hymenochaetales, belonging to Agaricomycetes, Basidiomycota, comprises most polypores and corticioid fungi and, also, a few agarics. The latest taxonomic framework accepts 14 families in this order. When further exploring species diversity of Hymenochaetales, two corticioid specimens collected from China producing cystidia with large umbrella-shaped crystalline heads attracted our attention. This kind of cystidia was reported only in three unsequenced species, viz. Tubulicrinis corneri, T. hamatus and T. umbraculus, which were accepted in Tubulicrinaceae, Hymenochaetales. The current multilocus-based phylogeny supports that the two Chinese specimens formed an independent lineage from Tubulicrinaceae as well as the additional 13 families and all sampled genera in Hymenochaetales. Therefore, a monotypic family, Umbellaceae, is newly described with the new genus Umbellus as the type genus to represent this lineage. The two Chinese specimens are newly described as U. sinensis, which differs from T. corneri, T. hamatus, and T. umbraculus in a combination of a smooth to grandinioid hymenophoral surface, not flattened, broadly ellipsoid basidiospores with a tiny apiculus, and growth on angiosperm wood. Due to the presence of the unique cystidia, the three species of Tubulicrinis, even though they lack available molecular sequences, are transferred to Umbellus as U. corneri, U. hamatus, and U. umbraculus. Hereafter, all known species with large umbrella-shaped crystalline-headed cystidia are in a single genus. In summary, the current study provides a supplement to the latest taxonomic framework of Hymenochaetales and will help to further explore species diversity and the evolution of this fungal order. Full article
(This article belongs to the Special Issue Taxonomy, Systematics and Evolution of Forestry Fungi, 2nd Edition)
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