molecules-logo

Journal Browser

Journal Browser

Carbohydrate Chemistry II

A special issue of Molecules (ISSN 1420-3049). This special issue belongs to the section "Macromolecular Chemistry".

Deadline for manuscript submissions: closed (29 February 2024) | Viewed by 12482

Special Issue Editor


E-Mail Website
Guest Editor
Institut des Biomolécules Max Mousseron (IBMM), Université Montpellier, CNRS, ENSCM, Montpellier, France
Interests: carbohydrates; iminosugars; multivalency; click reactions; thiol-ene coupling; thiol-yne coupling; SuFEx; calixarenes

Special Issue Information

Dear Colleagues,

Oxygen- and nitrogen-linked oligosaccharides and glycoconjugates are involved in many fundamental biological processes, including inflammation, fertilization, cancer metastasis, and viral and bacterial infections. Hence, usable quantities of natural carbohydrates with a well-defined structure are needed to study those phenomena at the molecular level. However, since it can be difficult to obtain complex oligosaccharides and glycoconjugates in a pure form from natural sources, synthetic efforts have been directed toward the supply of these compounds, taking advantage of powerful glycosylation methodologies. Moreover, the stereoselective synthesis of carbon- and sulfur-linked isosteres of the natural glycosides has attracted the interest of researchers over the last three decades because these hydrolytically stable glycomimetics can be used as probes of recognition specificity or as inhibitors of carbohydrate processing enzymes. Other well-known inhibitors of glycosidase and glycosyltransferase enzymes are the iminosugars, naturally occurring monocyclic and bicyclic compounds closely related to carbohydrates, since they feature a basic nitrogen instead of the endocyclic oxygen atom. Since the isolation of the first iminosugar in 1967, hundreds of unnatural iminosugars have been synthesized in order to find potent yet selective therapeutic inhibitors of the above-mentioned enzymes. The present Special Issue of Molecules will deal with all modern aspects of carbohydrate chemistry, such as the synthesis of natural or unnatural C-, O-, N-, and S-glycosides and iminosugars; the isolation and analysis of natural oligosaccharides and glycoconjugates; and the preparation and molecular recognition of sugar- or iminosugar-based multivalent architectures.

Prof. Dr. Alberto Marra
Guest Editor

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Molecules is an international peer-reviewed open access semimonthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2700 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • glycosylation
  • C-glycosides
  • glycoconjugates
  • iminosugars
  • multivalent sugars
  • thioglycosides

Published Papers (8 papers)

Order results
Result details
Select all
Export citation of selected articles as:

Research

Jump to: Review

14 pages, 1655 KiB  
Article
Synthesis of Sucrose-Mimicking Disaccharide by Intramolecular Aglycone Delivery
by Kanae Sano, Akihiro Ishiwata, Hiroto Takamori, Takashi Kikuma, Katsunori Tanaka, Yukishige Ito and Yoichi Takeda
Molecules 2024, 29(8), 1771; https://doi.org/10.3390/molecules29081771 - 13 Apr 2024
Viewed by 585
Abstract
Rare sugars are known for their ability to suppress postprandial blood glucose levels. Therefore, oligosaccharides and disaccharides derived from rare sugars could potentially serve as functional sweeteners. A disaccharide [α-d-allopyranosyl-(1→2)-β-d-psicofuranoside] mimicking sucrose was synthesized from rare monosaccharides D-allose and [...] Read more.
Rare sugars are known for their ability to suppress postprandial blood glucose levels. Therefore, oligosaccharides and disaccharides derived from rare sugars could potentially serve as functional sweeteners. A disaccharide [α-d-allopyranosyl-(1→2)-β-d-psicofuranoside] mimicking sucrose was synthesized from rare monosaccharides D-allose and D-psicose. Glycosylation using the intermolecular aglycon delivery (IAD) method was employed to selectively form 1,2-cis α-glycosidic linkages of the allopyranose residues. Moreover, β-selective psicofuranosylation was performed using a psicofuranosyl acceptor with 1,3,4,6-tetra-O-benzoyl groups. This is the first report on the synthesis of non-reducing disaccharides comprising only rare d-sugars by IAD using protected ketose as a unique acceptor; additionally, this approach is expected to be applicable to the synthesis of functional sweeteners. Full article
(This article belongs to the Special Issue Carbohydrate Chemistry II)
Show Figures

Figure 1

13 pages, 3043 KiB  
Article
Biocatalytic Synthesis of Coumarin S-Glycosides: Towards Non-Cytotoxic Probes for Biomedical Imaging and Sensing
by Nastassja Burrini, Arnaud Pâris, Guillaume Collet, Pierre Lafite and Richard Daniellou
Molecules 2024, 29(6), 1322; https://doi.org/10.3390/molecules29061322 - 16 Mar 2024
Viewed by 1047
Abstract
This study unveils an innovative method for synthesizing coumarin S-glycosides, employing original biocatalysts able to graft diverse carbohydrate structures onto 7-mercapto-4-methyl-coumarin in one-pot reactions. The fluorescence properties of the generated thio-derivatives were assessed, providing valuable insights into their potential applications in biological [...] Read more.
This study unveils an innovative method for synthesizing coumarin S-glycosides, employing original biocatalysts able to graft diverse carbohydrate structures onto 7-mercapto-4-methyl-coumarin in one-pot reactions. The fluorescence properties of the generated thio-derivatives were assessed, providing valuable insights into their potential applications in biological imaging or sensing. In addition, the synthesized compounds exhibited no cytotoxicity across various human cell lines. This research presents a promising avenue for the development of coumarin S-glycosides, paving the way for their application in diverse biomedical research areas. Full article
(This article belongs to the Special Issue Carbohydrate Chemistry II)
Show Figures

Figure 1

11 pages, 776 KiB  
Article
Synthesis of Pseudooligosaccharides Related to the Capsular Phosphoglycan of Haemophilus influenzae Type a
by Anastasia A. Kamneva, Dmitry V. Yashunsky, Elena A. Khatuntseva and Nikolay E. Nifantiev
Molecules 2023, 28(15), 5688; https://doi.org/10.3390/molecules28155688 - 27 Jul 2023
Viewed by 723
Abstract
Synthesis of spacer-armed pseudodi-, pseudotetra-, and pseudohexasaccharides related to the capsular phosphoglycan of Haemophilus influenzae type a, the second most virulent serotype of H. influenzae (after type b), was performed for the first time via iterative chain elongation using H-phosphonate chemistry [...] Read more.
Synthesis of spacer-armed pseudodi-, pseudotetra-, and pseudohexasaccharides related to the capsular phosphoglycan of Haemophilus influenzae type a, the second most virulent serotype of H. influenzae (after type b), was performed for the first time via iterative chain elongation using H-phosphonate chemistry for the formation of inter-unit phosphodiester bridges. These compounds were prepared for the design of neoglycoconjugates, as exemplified by the transformation of the obtained pseudohexasaccharide derivative into a biotinylated glycoconjugate suitable for use in immunological studies, particularly in diagnostic screening systems as a coating antigen for streptavidin-coated plates and chip slides. Full article
(This article belongs to the Special Issue Carbohydrate Chemistry II)
Show Figures

Figure 1

17 pages, 4332 KiB  
Article
Identification of New L-Fucosyl and L-Galactosyl Amides as Glycomimetic Ligands of TNF Lectin Domain of BC2L-C from Burkholderia cenocepacia
by Sarah Mazzotta, Giulia Antonini, Francesca Vasile, Emilie Gillon, Jon Lundstrøm, Annabelle Varrot, Laura Belvisi and Anna Bernardi
Molecules 2023, 28(3), 1494; https://doi.org/10.3390/molecules28031494 - 3 Feb 2023
Cited by 1 | Viewed by 1713
Abstract
The inhibition of carbohydrate-lectin interactions is being explored as an efficient approach to anti adhesion therapy and biofilm destabilization, two alternative antimicrobial strategies that are being explored against resistant pathogens. BC2L-C is a new type of lectin from Burkholderia cenocepacia that binds (mammalian) fucosides [...] Read more.
The inhibition of carbohydrate-lectin interactions is being explored as an efficient approach to anti adhesion therapy and biofilm destabilization, two alternative antimicrobial strategies that are being explored against resistant pathogens. BC2L-C is a new type of lectin from Burkholderia cenocepacia that binds (mammalian) fucosides at the N-terminal domain and (bacterial) mannosides at the C-terminal domain. This double carbohydrate specificity allows the lectin to crosslink host cells and bacterial cells. We have recently reported the design and generation of the first glycomimetic antagonists of BC2L-C, β-C- or β-N-fucosides that target the fucose-specific N-terminal domain (BC2L-C-Nt). The low water solubility of the designed N-fucosides prevented a full examination of this promising series of ligands. In this work, we describe the synthesis and biophysical evaluation of new L-fucosyl and L-galactosyl amides, designed to be water soluble and to interact with BC2L-C-Nt. The protein–ligand interaction was investigated by Saturation Transfer Difference NMR, Isothermal Titration Calorimetry and crystallographic studies. STD-NMR experiments showed that both fucosyl and galactosyl amides compete with α-methyl fucoside for lectin binding. A new hit compound was identified with good water solubility and an affinity for BC2L-C-Nt of 159 μM (ITC), which represents a one order of magnitude gain over α-methyl fucoside. The x-ray structure of its complex with BC2L-C-Nt was solved at 1.55 Å resolution. Full article
(This article belongs to the Special Issue Carbohydrate Chemistry II)
Show Figures

Figure 1

14 pages, 982 KiB  
Article
Investigation of the Protection of the C4 Hydroxyl Group in Macrobicyclic Kdo Donors
by Shogo Hamajima, Naoko Komura, Hide-Nori Tanaka, Akihiro Imamura, Hideharu Ishida, Tsuyoshi Ichiyanagi and Hiromune Ando
Molecules 2023, 28(1), 102; https://doi.org/10.3390/molecules28010102 - 23 Dec 2022
Cited by 6 | Viewed by 1395
Abstract
Chemical synthesis of 3-deoxy-d-manno-2-octulosonic acid (Kdo)-containing glycans, such as bacterial lipopolysaccharides (LPSs) and capsular polysaccharides (CPSs), is in high demand for the development of vaccines against pathogenic bacteria. We have recently achieved the complete α-stereoselective glycosidation of Kdo using a macrobicyclic [...] Read more.
Chemical synthesis of 3-deoxy-d-manno-2-octulosonic acid (Kdo)-containing glycans, such as bacterial lipopolysaccharides (LPSs) and capsular polysaccharides (CPSs), is in high demand for the development of vaccines against pathogenic bacteria. We have recently achieved the complete α-stereoselective glycosidation of Kdo using a macrobicyclic donor tethered at the C1 and C5 positions. In this study, to expand the scope of Kdo glycosidation, we sought to protect the 4-OH group, thereby shortening the reaction time and ensuring the conversion of the glycosyl acceptor via its selective removal. The protection of the 4-OH group influenced the reactivity of the Kdo donor, and the triisopropylsilyl (TIPS) group acted as a selectively removable booster. The 4-O-TIPS donor allowed the synthesis of the α(2,4)-linked dimeric Kdo sequence, which is widely found in bacterial LPSs. Full article
(This article belongs to the Special Issue Carbohydrate Chemistry II)
Show Figures

Figure 1

13 pages, 5837 KiB  
Article
Activation of Thioglycosides with Copper(II) Bromide
by Faranak Pooladian, Samira Escopy and Alexei V. Demchenko
Molecules 2022, 27(21), 7354; https://doi.org/10.3390/molecules27217354 - 29 Oct 2022
Cited by 2 | Viewed by 1730
Abstract
Reported herein is a new protocol for glycosidation of alkyl and aryl thioglycosides in the presence of copper(II) bromide. While the activation with CuBr2 alone was proven suitable for reactive glycosyl donors, the activation of less reactive donors was more efficient in [...] Read more.
Reported herein is a new protocol for glycosidation of alkyl and aryl thioglycosides in the presence of copper(II) bromide. While the activation with CuBr2 alone was proven suitable for reactive glycosyl donors, the activation of less reactive donors was more efficient in the presence of triflic acid as an additive. A variety of thioglycoside donors in reactions with different glycosyl acceptors were investigated to determine the initial scope of this reaction. Full article
(This article belongs to the Special Issue Carbohydrate Chemistry II)
Show Figures

Scheme 1

35 pages, 5378 KiB  
Article
Synthesis of Four Orthogonally Protected Rare l-Hexose Thioglycosides from d-Mannose by C-5 and C-4 Epimerization
by Fruzsina Demeter, Ilona Bereczki, Anikó Borbás and Mihály Herczeg
Molecules 2022, 27(11), 3422; https://doi.org/10.3390/molecules27113422 - 25 May 2022
Cited by 4 | Viewed by 2272
Abstract
l-Hexoses are important components of biologically relevant compounds and precursors of some therapeuticals. However, they typically cannot be obtained from natural sources and due to the complexity of their synthesis, their commercially available derivatives are also very expensive. Starting from one of [...] Read more.
l-Hexoses are important components of biologically relevant compounds and precursors of some therapeuticals. However, they typically cannot be obtained from natural sources and due to the complexity of their synthesis, their commercially available derivatives are also very expensive. Starting from one of the cheapest d-hexoses, d-mannose, using inexpensive and readily available chemicals, we developed a reaction pathway to obtain two orthogonally protected l-hexose thioglycoside derivatives, l-gulose and l-galactose, through the corresponding 5,6-unsaturated thioglycosides by C-5 epimerization. From these derivatives, the orthogonally protected thioglycosides of further two l-hexoses (l-allose and l-glucose) were synthesized by C-4 epimerization. The preparation of the key intermediates, the 5,6-unsaturated derivatives, was systematically studied using various protecting groups. By the method developed, we are able to produce highly functionalized l-gulose derivatives in 9 steps (total yields: 21–23%) and l-galactose derivatives in 12 steps (total yields: 6–8%) starting from d-mannose. Full article
(This article belongs to the Special Issue Carbohydrate Chemistry II)
Show Figures

Graphical abstract

Review

Jump to: Research

28 pages, 2171 KiB  
Review
Impact and Control of Sugar Size in Glycoconjugate Vaccines
by Giuseppe Stefanetti, Calman Alexander MacLennan and Francesca Micoli
Molecules 2022, 27(19), 6432; https://doi.org/10.3390/molecules27196432 - 29 Sep 2022
Cited by 4 | Viewed by 2099
Abstract
Glycoconjugate vaccines have contributed enormously to reducing and controlling encapsulated bacterial infections for over thirty years. Glycoconjugate vaccines are based on a carbohydrate antigen that is covalently linked to a carrier protein; this is necessary to cause T cell responses for optimal immunogenicity, [...] Read more.
Glycoconjugate vaccines have contributed enormously to reducing and controlling encapsulated bacterial infections for over thirty years. Glycoconjugate vaccines are based on a carbohydrate antigen that is covalently linked to a carrier protein; this is necessary to cause T cell responses for optimal immunogenicity, and to protect young children. Many interdependent parameters affect the immunogenicity of glycoconjugate vaccines, including the size of the saccharide antigen. Here, we examine and discuss the impact of glycan chain length on the efficacy of glycoconjugate vaccines and report the methods employed to size polysaccharide antigens, while highlighting the underlying reaction mechanisms. A better understanding of the impact of key parameters on the immunogenicity of glycoconjugates is critical to developing a new generation of highly effective vaccines. Full article
(This article belongs to the Special Issue Carbohydrate Chemistry II)
Show Figures

Figure 1

Back to TopTop