Journal Description
Phycology
Phycology
is an international, peer-reviewed, open access journal on phycology published quarterly online by MDPI.
- Open Access— free for readers, with article processing charges (APC) paid by authors or their institutions.
- High Visibility: indexed within ESCI (Web of Science), Scopus, EBSCO, and other databases.
- Rapid Publication: manuscripts are peer-reviewed and a first decision is provided to authors approximately 21 days after submission; acceptance to publication is undertaken in 3.9 days (median values for papers published in this journal in the second half of 2024).
- Recognition of Reviewers: APC discount vouchers, optional signed peer review, and reviewer names published annually in the journal.
Latest Articles
Nutrient Accessibility Influences Stalk Formation in the Benthic Diatom Achnanthidium minutissimum
Phycology 2025, 5(2), 13; https://doi.org/10.3390/phycology5020013 - 1 Apr 2025
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Achnanthidium minutissimum is a widely distributed benthic freshwater diatom. The alga can produce stalks that stick the cell to the surface and subsequently extracellular capsules developing into biofilms. Extracts of the diatom-associated bacterium Dyadobacter sp. 32 have been shown previously to induce stalk
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Achnanthidium minutissimum is a widely distributed benthic freshwater diatom. The alga can produce stalks that stick the cell to the surface and subsequently extracellular capsules developing into biofilms. Extracts of the diatom-associated bacterium Dyadobacter sp. 32 have been shown previously to induce stalk and capsule formation by the diatom. Here, we studied the impact of macronutrients on the generation of stalks induced by bacterial extracts with respect to the frequency of stalk generation and stalk lengths, using axenic cultures to avoid any additional impact of bacteria on the nutrient availability. We found that nitrate deprivation inhibited cell division of A. minutissimum within four days, but it did not initially affect stalk production or elongation. Silica limitation instead inhibited both stalk production and elongation. Similarly, sulfate was required for stalk formation, which was supported by the energy-dispersive X-ray spectroscopy of A. minutissimum cells showing that sulfur was abundant in the stalks.
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Open AccessArticle
Light-Emitting Diode Illumination Enhances Biomass, Pigment, and Lipid Production in Halotolerant Cyanobacterium Aphanothece halophytica
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Sitthichai Thongtha, Chokchai Kittiwongwattana, Aran Incharoensakdi and Saranya Phunpruch
Phycology 2025, 5(2), 12; https://doi.org/10.3390/phycology5020012 - 25 Mar 2025
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Light characteristics, including spectrum and intensity, significantly impact cyanobacterial biomass production, pigment biosynthesis, and cellular metabolism, influencing the composition of various biochemical compounds. This study aimed to investigate the effects of light-emitting diode (LED) illumination on biomass, pigment, and lipid production in the
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Light characteristics, including spectrum and intensity, significantly impact cyanobacterial biomass production, pigment biosynthesis, and cellular metabolism, influencing the composition of various biochemical compounds. This study aimed to investigate the effects of light-emitting diode (LED) illumination on biomass, pigment, and lipid production in the unicellular halotolerant cyanobacterium Aphanothece halophytica, cultivated in a suitable natural seawater (SNSW) medium. The results revealed that LED light outperformed fluorescent light, with blue LED light, particularly at an intensity of 60 μmol photons m−2 s−1, significantly enhancing growth, pigment synthesis, and lipid accumulation. This resulted in a maximum cell density of 68.96 ± 1.52 × 106 cells mL−1, a specific growth rate of 0.302 ± 0.002 day−1, and a lipid productivity of 56.81 ± 0.75 mg L−1 day−1. White LED light produced lipids suitable for biodiesel, whereas blue, green, and red LEDs promoted the accumulation of polyunsaturated fatty acids (PUFAs), beneficial for food supplements. These findings highlight the potential of LED-based cultivation strategies for optimizing biomass and biochemical compound production in A. halophytica.
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Open AccessTechnical Note
An Easy and Non-Hazardous Extraction Method for Phycobiliproteins and Pigments from Anabaena cylindrica
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Jonas Kollmen, Fabian Lorig and Dorina Strieth
Phycology 2025, 5(2), 11; https://doi.org/10.3390/phycology5020011 - 22 Mar 2025
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Phycobiliproteins and pigments derived from cyanobacteria hold significant potential for diverse applications in the food, pharmaceutical, and chemical industries. The filamentous cyanobacterium Anabaena cylindrica serves as a valuable resource for extracting these compounds. This study develops a simplified, safe, and cost-effective extraction method
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Phycobiliproteins and pigments derived from cyanobacteria hold significant potential for diverse applications in the food, pharmaceutical, and chemical industries. The filamentous cyanobacterium Anabaena cylindrica serves as a valuable resource for extracting these compounds. This study develops a simplified, safe, and cost-effective extraction method that eliminates toxic solvents and minimizes processing steps. This makes the method applicable for all users and allows the easy integration of the extraction into biorefinery concepts in which the biomass is to be used as a fertilizer, for example. Utilizing salts such as ammonium sulfate and calcium chloride (15 gL−1 each) enables the effective extraction of phycocyanin (PC) and allophycocyanin, achieving a PC concentration of 192.34 and 209.44 , respectively. Ethanol was introduced as a less toxic alternative to methanol for pigment extraction, increasing chlorophyll a and carotenoid recovery by 21% and 37%, respectively.
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Open AccessReview
Innovative Processing and Industrial Applications of Seaweed
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Abhishek Sharma, Shrestha Dubey, Kavita Singh, Rochak Mittal, Patrick Quille and Gaurav Rajauria
Phycology 2025, 5(1), 10; https://doi.org/10.3390/phycology5010010 - 3 Mar 2025
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Seaweed is a resilient macrophytic plant thriving in intertidal zones. These are rapidly gaining attention due to their autotrophic nourishment, rapid growth, and minimal land requirement for cultivation. Seaweed is used in various food and non-food sectors, thus possessing immense potential as a
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Seaweed is a resilient macrophytic plant thriving in intertidal zones. These are rapidly gaining attention due to their autotrophic nourishment, rapid growth, and minimal land requirement for cultivation. Seaweed is used in various food and non-food sectors, thus possessing immense potential as a valuable bioresource with high commercial value. However, utilizing seaweed as a bioresource comes with various challenges at processing levels, particularly at cost-effective downstream processing. Hence, this review highlights the advancement in seaweed biomass processing together with its application in food, nutraceuticals, pharmaceuticals, cosmetics, and non-food sectors. Additionally, the advancements in seaweed cultivation and the applications of seaweed in agriculture as a biostimulant, biofuel production, and packaging material are also reviewed. Finally, this review addresses the need for technology intensification, public awareness, and financial investment to enhance the commercialization and integration of seaweed-based products into the bioeconomy. The potential of seaweed to contribute to climate change mitigation and the circular economy is underscored, calling for further research and development to optimize its multifaceted applications.
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Open AccessArticle
Photobiological and Biochemical Characterization of Conchocelis and Blade Phases from Porphyra linearis (Rhodophyta, Bangiales)
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Débora Tomazi Pereira and Félix L. Figueroa
Phycology 2025, 5(1), 9; https://doi.org/10.3390/phycology5010009 - 28 Feb 2025
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Porphyra specimens are red macroalgae with significant economic importance for food and pharmaceutical industries due to their physiological activities resulting from their bioactive compounds (BACs). Due to its economic importance, this research aimed to characterize the photosynthetic and biochemical aspects of the conchocelis
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Porphyra specimens are red macroalgae with significant economic importance for food and pharmaceutical industries due to their physiological activities resulting from their bioactive compounds (BACs). Due to its economic importance, this research aimed to characterize the photosynthetic and biochemical aspects of the conchocelis and blade phases of Porphyra linearis to understand and help improve production of this algae. The algae were cultured for 7 days with nutrients for blade phase measurements, while another portion was cultured without nutrients for 21 days to release carpospores, which were cultivated for 4 months. For both phases, the content of BACs (chlorophyll a, carotenoids, phycobiliproteins, phenols, carbohydrates, proteins, mycosporine-like amino acids), antioxidant activity, and photosynthetic parameters were analyzed. Most of the parameters showed the blade phase had better results than conchocelis, except for carbohydrates. Phycobiliproteins showed no statistical differences between the phases. These findings highlight that conchocelis is not a good BACs source compared to the blade phase, but it is a crucial phase in the life cycle of Porphyra. Understanding the key parameters for maintaining the cultivation of conchocelis stocks for the development of the blade phase is a way to produce macroscopic biomass of this economically important algae throughout the year.
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Open AccessCommunication
The Effect of Solvent Choice on Antioxidant Potential and Chemical Composition of Extracts from Microalgae Chaetocerus costatus
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Roberta Frleta Matas, Martina Čagalj, Katarina Jelušić, Sanja Radman and Vida Šimat
Phycology 2025, 5(1), 8; https://doi.org/10.3390/phycology5010008 - 20 Feb 2025
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This study aim to compare the extraction yield, antioxidant potential, and chemical composition of Chaetoceros costatus extracted with acetone, ethanol, and hexane. The freeze-dried diatom biomass was extracted by ultrasonication for 1 h at 40 °C. The antioxidant capacity was determined using 2,2-diphenyl-1-picrylhydrazyl
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This study aim to compare the extraction yield, antioxidant potential, and chemical composition of Chaetoceros costatus extracted with acetone, ethanol, and hexane. The freeze-dried diatom biomass was extracted by ultrasonication for 1 h at 40 °C. The antioxidant capacity was determined using 2,2-diphenyl-1-picrylhydrazyl (DPPH) radical scavenging and oxygen radical absorbance capacity (ORAC), while the chemical profiles of the extracts were analyzed using high-performance liquid chromatography with high-resolution mass spectrometry with electrospray ionization (UHPLC-ESI-HRMS). The ORAC assay showed a 27% higher activity of the acetone extract, while the DPPH assay showed almost 3-fold higher DPPH inhibition. Pigments, fatty acids, sterols, and their derivatives were identified in all extracts. The chemical composition of ethanolic and acetonic extracts did not differ significantly, and hexane yielded the fewest compounds. The results of this study will contribute to extraction challenges that limit biotechnological application and exploitation of diatoms.
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Open AccessArticle
Nutritional Properties, Antioxidant Activity, and Consumer Acceptability of Sourdough Bread Supplemented with Marine Algae Powder Using Selected Traditional Starters
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Mounir EL Boujamaai, Imane Brahimi, Meryem Benyamane, Nouhaila Belasla, João Miguel Rocha, Faouzi Errachidi and Abdellah Zinedine
Phycology 2025, 5(1), 7; https://doi.org/10.3390/phycology5010007 - 17 Feb 2025
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This study aimed at producing a sourdough bread supplemented with two marine algae powders of Ulva lactuca and Gelidium corneum at 2.5, 5, 7.5, and 10% (w/w, g/100 g DW) at the laboratory scale using mixed starters prepared with
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This study aimed at producing a sourdough bread supplemented with two marine algae powders of Ulva lactuca and Gelidium corneum at 2.5, 5, 7.5, and 10% (w/w, g/100 g DW) at the laboratory scale using mixed starters prepared with three lactic acid bacteria (LAB) combinations (LCS1, LCS2, and LCS3). The phytochemical composition, nutritional value, organoleptic properties, and acceptability of algae bread by consumers were then assessed. Good results were obtained for enriched bread with Gelidium at 2.5% (GB1) with a reducing sugar of 0.77 ± 0.1%, total sugar of 36.90 ± 3.15, and protein content of 8.3 ± 0.2%. While total phenolic content was 8.32 ± 1.20 mg GAE/g DW, total flavonoids was 225.00 ± 11.31 mgQE/g DW, and the antioxidant activity ranged from 71.05 ± 3.71 to 82.93 ± 3.61%. Regarding enriched bread with Ulva at 10% (UB12), reducing sugar was 0.48 ± 0.03%, total sugar was 45.45 ± 5.75%, and protein content was 3.7 ± 0.07%. The total phenolic content value was 6.45 ± 1.19 mg GAE/g DW, total flavonoids was 191.20 ± 12.52 mgQE/g DW, while the antioxidant activity values ranged from 52.06 ± 6.21 to 80.51 ± 1.72%. Microbiological analysis showed that all pathogenic bacteria were not detected in algae bread. The consumer acceptability test revealed that bread enriched at the level of 10% of algae powder was significant for the five selected criteria (general appearance, crumb color, odor, taste, and texture). Traditional bread supplemented with Gelidium powder at 2.5% and Ulva powder at 10%, prepared with combined sourdough (LCS1), showed good antioxidant and nutritional properties and consumer acceptance.
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Open AccessArticle
A Simple Method for Measuring Agar Gel Strength
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Lilach Shauli and Eitan Salomon
Phycology 2025, 5(1), 6; https://doi.org/10.3390/phycology5010006 - 11 Feb 2025
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Seaweeds are the only source for phycocolloids. Commercial applications of phycocolloids depend on their chemical/physical properties, including their gel forming ability. Thus, gel strength values are important for seaweed growers and scientists. Gel strength measurements include the use of texture analyzers or rheometers,
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Seaweeds are the only source for phycocolloids. Commercial applications of phycocolloids depend on their chemical/physical properties, including their gel forming ability. Thus, gel strength values are important for seaweed growers and scientists. Gel strength measurements include the use of texture analyzers or rheometers, which are not always available for seaweed growers and scientists. Here, we describe a home-made apparatus for assessing gel strength through the weight of a water column required for breaking a gel surface. The system worked well at gel concentrations between 0.5 and 1.5%, giving values of 82–535 g cm−2 and 163–754 g cm−2 for agar and agarose gels, respectively. The lowest variations were obtained for gel sample volumes between 25 and 30 mL. The system was manually operated but no significant variations were observed between measurements conducted by the five different users. The readings were independent of the water column fill rate. The variations in gel strength values were similar to reports using other gel strength measuring devices. We propose the use of our apparatus as a flexible, affordable tool for the assessment of gel quality, which is suitable for research groups or seaweed farmers without access to expensive equipment, and with a need to quickly assess their seaweed of interest at a relevant time scale for cultivation or harvest.
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Open AccessBrief Report
Optimizing Early Growth of Laminaria hyperborea in Controlled Settings: A Pathway to Improved Restoration Efforts
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Sílvia Chemello, Ana Coutinho, M. Francisca Sá, Débora Borges, Francisco Arenas, Isabel Sousa-Pinto and Isabel Costa
Phycology 2025, 5(1), 5; https://doi.org/10.3390/phycology5010005 - 17 Jan 2025
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Laminaria hyperborea, a key species in marine forest ecosystems, is experiencing pressure at its southern distribution limit in northern Portugal due to climate change and human-induced stressors. The ongoing degradation of marine forests highlights the need for effective restoration strategies to protect
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Laminaria hyperborea, a key species in marine forest ecosystems, is experiencing pressure at its southern distribution limit in northern Portugal due to climate change and human-induced stressors. The ongoing degradation of marine forests highlights the need for effective restoration strategies to protect biodiversity and maintain the essential services provided by these habitats. Cultivation of juvenile kelps in laboratory settings is a common approach shared across multiple strategies aimed at supporting reforestation efforts; however, the specific cultivation process for L. hyperborea remains largely underexplored. In this study, we tested two seeding densities to optimize the production of L. hyperborea recruits for reforestation initiatives. We assessed the effects of seeding density on juvenile development by measuring both area coverage and length. Our findings revealed that higher seeding density initially promoted greater area coverage (e.g., 8.69 ± 0.38 cm2 vs. 3.35 ± 0.27 cm2) but reduced the length of individual recruits over time (e.g., 0.26 ± 0.0026 cm vs. 0.39 ± 0.003 cm at T3). This suggests that increased competition for resources at high densities limits individual growth. In contrast, lower densities produced larger, more robust individuals (e.g., 0.50 ± 0.004 cm vs. 0.262 ± 0.003 cm at T4), which may enhance post-transplantation survival in challenging environmental conditions. This suggests that utilizing lower seeding densities may improve individual growth while decreasing overall resource use and maintenance needs, promoting a more sustainable cultivation process and minimizing impacts on donor populations. However, further research is essential to refine the cultivation protocols and fully understand the variables influencing juvenile kelp development. Improving all phases of the restoration process, from laboratory cultivation to field deployment, will be critical for reducing costs, streamlining logistics, and ensuring the scalability of future kelp restoration efforts.
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Open AccessArticle
Influence of Light Intensity and Temperature on the Development of Early Life Stages of Ascophyllum nodosum (Phaeophyceae)
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Ana Coutinho, Sílvia Chemello, Débora Borges, Francisco Arenas, Isabel Sousa-Pinto and Isabel Costa
Phycology 2025, 5(1), 4; https://doi.org/10.3390/phycology5010004 - 16 Jan 2025
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Ascophyllum nodosum is an ecologically and economically important species forming marine forests in temperate regions. In Europe, this brown seaweed reaches its southern distribution limit in the north of Portugal, where populations are under climatic pressure. Conservation and restoration actions are essential to
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Ascophyllum nodosum is an ecologically and economically important species forming marine forests in temperate regions. In Europe, this brown seaweed reaches its southern distribution limit in the north of Portugal, where populations are under climatic pressure. Conservation and restoration actions are essential to preserve the important ecological roles of these populations, including biodiversity enhancement. In this study, we assessed the effect of temperature and light on the development of the early life stages of A. nodosum, from gamete germination and rhizoid development to germling growth, in order to support the establishment of nursery protocols for producing seedlings that can be used in reforestation actions. We found that for this population, temperature around 12 °C and low-light conditions (40 μmol m−2 s−1) favor gamete germination, rhizoid development, and initial germling growth during the first month, after which higher light supply (>80 μmol m−2 s−1) is needed to sustain further growth stages. The results obtained in this study are relevant for the establishment of nursery methods for A. nodosum and should be complemented by further studies to determine more precisely the light and nutrient requirements to optimize growth in the germlings’ later growth stages.
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Open AccessArticle
Diatom-Based Photobiological Treatment of Reverse Osmosis Concentrate: Optimization of Light and Temperature and Biomass Analysis
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Han Gao, Emon Roy, Mason S. Underwood, Hunter Adams, Harshad V. Kulkarni, Saugata Datta, Shinya Sato and Keisuke Ikehata
Phycology 2025, 5(1), 3; https://doi.org/10.3390/phycology5010003 - 15 Jan 2025
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As global water scarcity intensifies, the desalination of brackish groundwater and surface water plays a critical role in augmenting water supplies. However, managing reverse osmosis concentrate (ROC) from brackish water desalination remains challenging due to silica and calcium accumulation and precipitation, which cause
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As global water scarcity intensifies, the desalination of brackish groundwater and surface water plays a critical role in augmenting water supplies. However, managing reverse osmosis concentrate (ROC) from brackish water desalination remains challenging due to silica and calcium accumulation and precipitation, which cause membrane scaling and reduce freshwater recovery. This study employed the brackish diatom Gedaniella flavovirens Psetr3 in a photobiological treatment to remove dissolved silica and calcium, offering a natural, sustainable solution to improve freshwater recovery. Optimal treatment conditions were identified, with a light intensity of 200 µmol m−2 s−1 and incubation temperatures between 23 °C and 30 °C maximizing silica uptake (up to 46 ± 3 mg/L/day) while minimizing diatom mortality. This study reports, for the first time, the silica, organic, and calcite content in diatom biomass and their production rates during the photobiological treatment of ROC using G. flavovirens Psetr3. The photobiological treatment of one million gallons (3785 m3) per day of ROC would produce 174 kg of silica, 163 kg of organics, and 314 kg of calcite daily. These findings provide valuable insights into the potential for utilizing these bioresources to offset the costs of photobiological treatment and subsequent desalination processes.
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Open AccessArticle
Analysis of the Real-Time Phases of Adaptation Through the Lens of an Emergent Risk: Sargassum Adaptation Policy Analysis in the Caribbean
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Sien van der Plank, Janice Cumberbatch, Bethia Thomas, Jack Corbett and Emma L. Tompkins
Phycology 2025, 5(1), 2; https://doi.org/10.3390/phycology5010002 - 12 Jan 2025
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Since 2011, countries across the tropical Atlantic have experienced severe influxes of the seaweed species Sargassum natans and Sargassum fluitans (henceforth, “sargassum”), with nearshore and onshore ecological, economic and social impacts locally and regionally. Not all affected countries have had the same response
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Since 2011, countries across the tropical Atlantic have experienced severe influxes of the seaweed species Sargassum natans and Sargassum fluitans (henceforth, “sargassum”), with nearshore and onshore ecological, economic and social impacts locally and regionally. Not all affected countries have had the same response to this emergent environmental challenge. Here, we explore the first ten years of policies produced in response to sargassum influx risk across islands in the Wider Caribbean Region, considering the variation in form, content and aim of sargassum adaptation policies. This assessment of the variation in Caribbean adaptation policies allows lessons to be identified for rapid adaptation to emergent environmental challenges. We find that several countries have no national policy for sargassum adaptation, and many subnational island jurisdictions have no island-specific policies. Whilst there is increasing anecdotal evidence of private and local adaptations taking place to address sargassum influx events, there remains significant scope for government leadership and resource support in adapting to this emergent threat. The lesson is that private adaptations to emergent threats may be quicker to develop and execute than policy adaptation, but longer-term, larger-scale adaptations depend on evidence-based, widely supported government policies with clear avenues of funding.
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(This article belongs to the Collection Sargassum Golden Tides, a Global Problem)
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Open AccessReview
A Global Bibliometric Analysis of Seaweed Biodiversity, Endemic Taxa, and Conservation (1992–2023)
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Sachin G. Rathod, Anand N. Choudhari and Vaibhav A. Mantri
Phycology 2025, 5(1), 1; https://doi.org/10.3390/phycology5010001 - 10 Jan 2025
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Marine habitats are increasingly facing human-induced stressors, posing significant threats to global marine biodiversity. Understanding the ecological, economic, and social importance of marine ecosystems is paramount. This study conducts a comprehensive bibliometric analysis of seaweed biodiversity from 1992 to 2023, aiming to (i)
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Marine habitats are increasingly facing human-induced stressors, posing significant threats to global marine biodiversity. Understanding the ecological, economic, and social importance of marine ecosystems is paramount. This study conducts a comprehensive bibliometric analysis of seaweed biodiversity from 1992 to 2023, aiming to (i) quantify the literature productivity, (ii) identify the active countries, (iii) determine the prolific authors, (iv) highlight the highly cited publications, and (v) enumerate the influential journals. The average annual number of publications was 37. Australia and the USA ranked highest based on the total number of citations, with 7559 and 5273, respectively. The University of Western Australia led in terms of the total number of citations, with 3688 citations from 40 publications, while the Australian Research Council emerged as the top funder. Journals such as the Journal of Experimental Marine Biology and Ecology, Ecology, and Botanica Marina were identified as the top contributors. The keyword ‘biodiversity’ appeared 146 times, with a total link strength of 425. A similar analysis was presented for endemic seaweeds and their conservation. Among the seven major and four emerging drivers, climate change was the most researched driver, accounting for 45.80%, with 120 articles. This study anticipates that in the genomic era, seaweed biodiversity will receive increased attention for its potential in regard to the development of coherent conservation plans and innovative bioprospecting strategies that are beneficial to humankind.
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Open AccessBrief Report
Effects of Selenite on Growth and Selenium Accumulation in Three Terrestrial Microalgae with Application Potential in Food and Agriculture
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Jiahong Li, Xiang Gao, Shucheng Zhou, Qiao Zeng, Kai Liu and Zhengke Li
Phycology 2024, 4(4), 621-628; https://doi.org/10.3390/phycology4040034 - 19 Dec 2024
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Selenium (Se)-enriched microalgae are emerging as new food or agricultural resources. Thus far, the microalgae tested for Se accumulation or biofortification are still very limited. Here, we investigated the effects of selenite on the growth of three terrestrial microalgae (Vischeria sp. WL1,
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Selenium (Se)-enriched microalgae are emerging as new food or agricultural resources. Thus far, the microalgae tested for Se accumulation or biofortification are still very limited. Here, we investigated the effects of selenite on the growth of three terrestrial microalgae (Vischeria sp. WL1, Chlorella sp. WL1, and Nostoc flagelliforme) and their total Se accumulation levels. The three microalgae were previously collected at the same location and show great application potential but differ in classification and growth speed. Three concentrations (10, 20, and 40 mg/L) of selenite were used for treatment. The former two species could resist 40 mg/L selenite but the last one could not. At the relatively optimal concentration (20 mg/L selenite), their specific growth rates were 0.09, 0.10, and 0.05 μ day−1, respectively. Vischeria sp. WL1 could accumulate 3.3 mg/g dry weight (DW) Se after 16 days of cultivation; N. flagelliforme could accumulate 5.6 mg/g DW Se after 24 days of cultivation. Chlorella sp. WL1 accumulated a relatively lower amount of Se, being 0.74 mg/L DW after 18 days of cultivation, but its more rapid growth would be beneficial to saving production costs. These results indicate that three microalgae are capable of functioning as excellent carriers for Se nutrients. This study will contribute to enriching the microalgal resource pool for Se biofortification in food and agricultural areas.
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Open AccessArticle
Application of Environmental DNA Metabarcoding to Differentiate Algal Communities by Littoral Zonation and Detect Unreported Algal Species
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Sergei Bombin, Andrei Bombin, Brian Wysor and Juan M. Lopez-Bautista
Phycology 2024, 4(4), 605-620; https://doi.org/10.3390/phycology4040033 - 18 Dec 2024
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Coastal areas are the most biologically productive and undoubtedly among the most complex ecosystems. Algae are responsible for most of the gross primary production in these coastal regions. However, despite the critical importance of algae for the global ecosystem, the biodiversity of many
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Coastal areas are the most biologically productive and undoubtedly among the most complex ecosystems. Algae are responsible for most of the gross primary production in these coastal regions. However, despite the critical importance of algae for the global ecosystem, the biodiversity of many algal groups is understudied, partially due to the high complexity of morphologically identifying algal species. The current study aimed to take advantage of the recently developed technology for biotic community assessment through the high-throughput sequencing (HTS) of environmental DNA (eDNA), known as the “eDNA metabarcoding”, to characterize littoral algal communities in the Northern Gulf of Mexico (NGoM). This study demonstrated that eDNA metabarcoding, based on the universal plastid amplicon (UPA) and part of the large nuclear ribosomal subunit (LSU) molecular markers, could successfully differentiate coastal biotic communities among littoral zones and geographical locations along the shoreline of the NGoM. The statistical significance of separation between biotic communities was partially dependent on the dissimilarity calculation metric; thus, the differentiation of algal community structure according to littoral zones was more distinct when phylogenetic distances were incorporated into the diversity analysis. Current work demonstrated that the relative abundance of algal species obtained with eDNA metabarcoding matches previously established zonation patterns for these species. In addition, the present study detected molecular signals of 44 algal species without previous reports for the Gulf of Mexico, thus providing an important, molecular-validated baseline of species richness for this region.
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Open AccessArticle
Chemical Diversity of Marine Filamentous Benthic Cyanobacteria
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Fernanda O. Chagas, Paulo I. Hargreaves, Victoria Gabriela S. Trindade, Taiane B. M. Silva, Gabriela de A. Ferreira, Yasmin Pestana, Marina A. Alves, Paulo Sergio Salomon, Vincent A. Bielinski and Ricardo M. Borges
Phycology 2024, 4(4), 589-604; https://doi.org/10.3390/phycology4040032 - 26 Nov 2024
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Genomic and chemical analysis has revealed that numerous species of filamentous cyanobacteria harbor complex secondary metabolisms tailored to their particular ecological niche. The metabolomic analysis of strains and environmental samples from benthic cyanobacterial mats (BCMs) from coral reefs has the potential to expand
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Genomic and chemical analysis has revealed that numerous species of filamentous cyanobacteria harbor complex secondary metabolisms tailored to their particular ecological niche. The metabolomic analysis of strains and environmental samples from benthic cyanobacterial mats (BCMs) from coral reefs has the potential to expand the library of marine cyanobacteria-derived natural products. In this study, cyanobacterial strains were obtained from phytobenthos collected from coral reefs in Abrolhos, Brazil and Ishigaki, Japan. Phylogenetic analysis of isolates shows high similarity to previously described members of benthic mats and also suggests the geographic expansion of the Adonisia lineage. Chemical analysis by untargeted liquid chromatography-high resolution mass spectrometry and data processing via MZmine and FBMN-GNPS confirmed the presence of a wide diversity of secondary metabolites. In addition, similarity analysis applying the newly developed tool DBsimilarity indicated the broad coverage of various biosynthetic and chemical classes of compounds previously reported for cyanobacteria. This report is one of the first applications of untargeted metabolomics workflow and similarity network construction for groups of marine filamentous cyanobacteria isolated from benthic mats on corals reefs.
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Open AccessArticle
Bioactivity Screening of Extracts from Icelandic Seaweeds for Potential Application in Cosmeceuticals
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Sophie Jensen, Júlía Karítas Helgadóttir and Rósa Jónsdóttir
Phycology 2024, 4(4), 576-588; https://doi.org/10.3390/phycology4040031 - 15 Oct 2024
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Seaweed is a great source of biologically active metabolites which could prove interesting in cosmeceutical applications. In this study, seven Icelandic seaweed species (Ascophyllum nodosum, Alaria esculenta, Laminaria hyperborea, Laminaria digitata, Saccharina latissima, Palmaria palmata, and
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Seaweed is a great source of biologically active metabolites which could prove interesting in cosmeceutical applications. In this study, seven Icelandic seaweed species (Ascophyllum nodosum, Alaria esculenta, Laminaria hyperborea, Laminaria digitata, Saccharina latissima, Palmaria palmata, and Schizymenia jonssonii) were screened for total polyphenol content, antioxidant properties, and inhibition of skin-degrading enzymes. Antioxidant assays included DPPH (2,2-diphenyl-1-picrylhydrazyl), reducing power, and ORAC (oxygen radical absorbance capacity). In most assays, A. nodosum extracts were the most active. A. nodosum extracts also showed the strongest inhibition of the skin-degrading enzymes elastase and collagenase at low concentrations, demonstrating its skin-protective qualities. To further investigate the activity, A. nodosum was subsequently extracted with solvents with increasing polarity into seven different extracts. Compared to other extracts, the extracts obtained by extraction with acetone and methanol showed the highest activity in all assays. Extracts obtained with room-temperature water and 85 °C water also demonstrated moderate to high activities. The outcomes of this study support the potential utilization of the brown seaweed A. nodosum as a source of natural ingredients in cosmeceuticals.
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Open AccessReview
Advancements and Prospects in Algal Biofuel Production: A Comprehensive Review
by
Halina Falfushynska
Phycology 2024, 4(4), 548-575; https://doi.org/10.3390/phycology4040030 - 11 Oct 2024
Cited by 5
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Microalgae represent a valuable renewable resource for biofuel production due to their high lipid content, rapid growth rates, and non-competition with food resources. Both freshwater species like Chlorella and marine species such as Dunaliella, Tetraselmis, and Nannochloropsis are among the most
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Microalgae represent a valuable renewable resource for biofuel production due to their high lipid content, rapid growth rates, and non-competition with food resources. Both freshwater species like Chlorella and marine species such as Dunaliella, Tetraselmis, and Nannochloropsis are among the most commonly utilized candidates. This review provides a comprehensive overview of current cultivation and harvesting methodologies for microalgae in the context of biofuel production, emphasizing sustainable aviation fuel and biohydrogen. It synthesizes recent findings, technological advancements, and practical implementations to enhance the productive and economic viability of microalgae-based biofuels, highlighting their potential as a sustainable renewable energy source. Among the biofuels, sustainable aviation fuel and biohydrogen stand out as significant contributors to reducing greenhouse gas emissions. Technologies such as the oil-to-jet process and Fischer–Tropsch synthesis are being optimized to convert algal lipids into high-quality fuels. Biohydrogen offers several advantages, including the potential for negative CO2 emissions and compatibility with existing hydrogen infrastructure. Despite the challenges associated with the high costs of cultivation and processing, advances in biotechnological methods and process engineering promise to overcome these barriers. This review highlights the importance of continued research and development to maximize the potential of microalgal biofuels in achieving sustainable energy goals and contributing to global efforts in mitigating climate change.
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Open AccessArticle
Sexual Propagation in the Green Seaweed Codium tomentosum—An Emerging Species for Aquaculture
by
Maria Francisca Sá, Teresa Cunha Pacheco, Isabel Sousa-Pinto and Gonçalo Silva Marinho
Phycology 2024, 4(4), 533-547; https://doi.org/10.3390/phycology4040029 - 3 Oct 2024
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Codium tomentosum holds a variety of bioactive compounds, high nutritional value and health benefits, which makes it a valuable natural resource for the food, cosmetic and pharmaceutical industries. Currently, C. tomentosum is farmed at a small-scale targeting niche markets, and further expansion of
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Codium tomentosum holds a variety of bioactive compounds, high nutritional value and health benefits, which makes it a valuable natural resource for the food, cosmetic and pharmaceutical industries. Currently, C. tomentosum is farmed at a small-scale targeting niche markets, and further expansion of production is limited by a lack of optimised propagation and cultivation methods. This study aims to identify the conditions required to control key production parameters including gametogenesis, gamete release and suitable culture conditions for the early stages of development of C. tomentosum. Wild specimens of C. tomentosum were collected on the Aguçadoura shore, north of Portugal. Gametogenesis was successfully induced in infertile specimens cultured under a short-day photoperiod (8 h:16 h; L:D). Gamete release was optimised through a combination of hydric shock and ultrasounds, with the highest gamete yield obtained after a 2 h 30 min desiccation period, followed by re-hydration and a series of three ultrasounds. Germlings, precursors of the adult C. tomentosum, grew faster when cultured under a lower light intensity (20 μmol m−2 s−1) compared to higher intensities (40 and 60 μmol m−2 s−1) in every light spectrum; additionally, the growth of germlings exposed to the lowest light intensity was significantly higher under white, red and green light spectra compared to blue light. The results on key production parameters constitute an important contribution to the establishment of nursery protocols based on sexual reproduction for aquaculture of the species.
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Open AccessSystematic Review
Bioprospecting Microalgae: A Systematic Review of Current Trends
by
Juan S. Chiriví-Salomón, Steven García-Huérfano and Ivan A. Giraldo
Phycology 2024, 4(3), 508-532; https://doi.org/10.3390/phycology4030028 - 15 Sep 2024
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The growing interest in microalgae is driven by their potential in various bioindustries, such as biofuel production, bioremediation, and the generation of high-value biomolecules. This paper aims to systematically review the state of research on bioprospecting microalgae, their applications, and recognize trends. This
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The growing interest in microalgae is driven by their potential in various bioindustries, such as biofuel production, bioremediation, and the generation of high-value biomolecules. This paper aims to systematically review the state of research on bioprospecting microalgae, their applications, and recognize trends. This study employs an exploratory and descriptive research approach, using bibliometric methods to analyze scientific production and identify emerging trends in bioprospecting microalgae research. The analysis reveals exponential publication growth, with multidisciplinary sources indicating a strong applied focus. Leading countries in this research field benefit from clear technology transfer policies, and the prevalent terms “production” and “biomass” underscore the industrial relevance. Key research areas include biofuels and bioremediation, with a combined emphasis that is often studied in cultivation and biomass production. Bioactive compounds derived from microalgae are a current trend for industrial, medical, and food applications. Although the potential for CO2 capture is acknowledged, direct studies are limited. This systematic review provides a comprehensive overview of current trends and identifies opportunities and challenges in microalgae research, highlighting its significance for sustainable development and industrial applications.
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