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17 pages, 3311 KB  
Article
Food Waste Bioconversion Features Depending on the Regime of Anaerobic Digestion
by Marta Zofia Cieślik, Andrzej Jan Lewicki, Wojciech Czekała and Iryna Vaskina
Energies 2025, 18(17), 4567; https://doi.org/10.3390/en18174567 - 28 Aug 2025
Viewed by 461
Abstract
Approximately one-third of global food production is wasted annually, which contributes significantly to greenhouse gas emissions and economic costs. Anaerobic digestion (AD) is an effective method for converting food waste into biogas, but its efficiency depends on factors such as temperature and substrate [...] Read more.
Approximately one-third of global food production is wasted annually, which contributes significantly to greenhouse gas emissions and economic costs. Anaerobic digestion (AD) is an effective method for converting food waste into biogas, but its efficiency depends on factors such as temperature and substrate composition. This study compared mesophilic and thermophilic AD of selectively collected fruit and vegetable waste, quantifying process efficiency and identifying factors leading to collapse. Studies were performed in 1 dm3 reactors with gradually increasing organic loading rates until process collapse. Process dynamics, stability, and gas yields were assessed through daily biogas measurements and analyses of pH, FOS/TAC ratio, sCOD, ammonia, volatile fatty acids, alcohols, total and volatile solids, and C/N ratio. Research has shown that peak methane yields occurred at OLR = 0.5–1.0 kg VS·m−3·d−1, with thermophilic systems producing 0.63–5.48% more methane during stable phases. Collapse occurred at OLR = 3.0 in thermophilic and 4.0 in mesophilic reactors, accompanied by sharp increases in methanol, acetic acid, butyric acid, propionic acid, and FOS/TAC. The pH dropped to 5.49 and 6.09. While thermophilic conditions offered higher methane yields, they were more susceptible to rapid process destabilization due to intermediate metabolite accumulation. Full article
(This article belongs to the Special Issue Biomass and Waste-to-Energy for Sustainable Energy Production)
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31 pages, 4915 KB  
Article
Disaccharides and Fructooligosaccharides (FOS) Production by Wild Yeasts Isolated from Agave
by Yadira Belmonte-Izquierdo, Luis Francisco Salomé-Abarca, Mercedes G. López and Juan Carlos González-Hernández
Foods 2025, 14(15), 2714; https://doi.org/10.3390/foods14152714 - 1 Aug 2025
Viewed by 674
Abstract
Fructooligosaccharides (FOS) are short fructans with different degrees of polymerization (DP) and bonds in their structure, generated by the distinct activities of fructosyltransferase enzymes, which produce distinct types of links. FOS are in high demand on the market, mainly because of their prebiotic [...] Read more.
Fructooligosaccharides (FOS) are short fructans with different degrees of polymerization (DP) and bonds in their structure, generated by the distinct activities of fructosyltransferase enzymes, which produce distinct types of links. FOS are in high demand on the market, mainly because of their prebiotic effects. In recent years, depending on the link type in the FOS structure, prebiotic activity has been shown to be increased. Studies on β-fructanofuranosidases (Ffasa), enzymes with fructosyltransferase activity in yeasts, have reported the production of 1F-FOS, 6F-FOS, and 6G-FOS. The aims of this investigation were to evaluate the capability of fifteen different yeasts to grow in Agave sp. juices and to determine the potential of these juices as substrates for FOS production. Additionally, the research aimed to corroborate and analyze the fructosyltransferase activity of enzymatic extracts obtained from agave yeasts by distinct induction media and to identify the role and optimal parameters (time and sucrose and glucose concentrations) for FOS and disaccharides production through Box–Behnken designs. To carry out such a task, different techniques were employed: FT-IR, TLC, and HPAEC-PAD. We found two yeasts with fructosyltransferase activity, P. kudriavzevii ITMLB97 and C. lusitaniae ITMLB85. In addition, within the most relevant results, the production of the FOS 1-kestose, 6-kestose, and neokestose, as well as disaccharides inulobiose, levanobiose, and blastose, molecules with potential applications, was determined. Overall, FOS production requires suitable yeast species, which grow in a medium under optimal conditions, from which microbial enzymes with industrial potential can be obtained. Full article
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15 pages, 2888 KB  
Article
Functional Analysis of FoCrpA in Fusarium oxysporum Causing Rice Seedling Blight
by Chun Wang, Liang Wang, Xuanjie Zhao, Lei Hou, Qingran Liu, Rui Ren, Anqi Lv, Xinyang Liu, Tianliang Xiong, Peng Guo, Xiaofeng Xu, Zhe Ni, Chunlai Liu and Junhua Zhang
J. Fungi 2025, 11(4), 317; https://doi.org/10.3390/jof11040317 - 17 Apr 2025
Viewed by 640
Abstract
Fusarium oxysporum is one of the main pathogens causing rice seedling blight disease. Revealing its pathogenic mechanism is of great significance for formulating prevention and control strategies for rice seedling blight disease. Copper transporting P-type ATPases (Cu-ATPase) is a large class of proteins [...] Read more.
Fusarium oxysporum is one of the main pathogens causing rice seedling blight disease. Revealing its pathogenic mechanism is of great significance for formulating prevention and control strategies for rice seedling blight disease. Copper transporting P-type ATPases (Cu-ATPase) is a large class of proteins located on the plasma membrane that utilize the energy provided by ATP hydrolysis phosphorylation to transport substrates across the membrane. It plays a crucial role in signal transduction, the maintenance of cell membrane stability, and material transport. The main function of Cu-ATPase is to maintain the homeostasis of copper in cells, which is essential for the normal growth and development of organisms. This study utilized the ATMT-mediated gene knockout method to obtain the knockout mutant ∆FoCrpA and the complementation strain ∆FoCrpA-C, which are highly homologous to the P-type heavy metal transport ATPase family in F. oxysporum. The results showed that, compared with the wild-type strain, the knockout mutant ∆FoCrpA had a lighter colony color; a reduced tolerance to copper ion, osmotic, and oxidative stress; a weakened ability to penetrate glass paper; and decreased pathogenicity. However, there was no significant difference in pathogenicity and other biological phenotypes between the complementation strain ∆FoCrpA-C and the wild-type strain. In summary, the FoCrpA gene is involved in osmotic and oxidative stress, affecting the invasion and penetration ability and pathogenicity of F. oxysporum, laying a theoretical foundation for understanding the development and pathogenic mechanism of F. oxysporum. Full article
(This article belongs to the Special Issue Plant Pathogens and Mycotoxins)
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13 pages, 2084 KB  
Article
Methane Production, Microbial Community, and Volatile Fatty Acids Profiling During Anaerobic Digestion Under Different Organic Loading
by Paulina Rusanowska, Marcin Zieliński, Marta Kisielewska, Magda Dudek, Łukasz Paukszto and Marcin Dębowski
Energies 2025, 18(3), 575; https://doi.org/10.3390/en18030575 - 25 Jan 2025
Cited by 5 | Viewed by 1391
Abstract
The organic loading rate (OLR) is a crucial parameter in the anaerobic digestion of lignocellulosic biomass. Optimizing the OLR ensures a balanced substrate release for gradual hydrolysis, thereby preventing the accumulation of inhibitors that can disrupt methanogenesis. Its significance lies in its direct [...] Read more.
The organic loading rate (OLR) is a crucial parameter in the anaerobic digestion of lignocellulosic biomass. Optimizing the OLR ensures a balanced substrate release for gradual hydrolysis, thereby preventing the accumulation of inhibitors that can disrupt methanogenesis. Its significance lies in its direct impact on the stability, efficiency, and overall performance of the digestion process. This study investigated the long-term anaerobic co-digestion of lignocellulosic biomass (Sida hermaphrodita) and cattle manure under varying organic loading rates (S1: 2 kgVS/m3·d, S2: 3 kgVS/m3·d, and S3: 4 kgVS/m3·d). Methane production, microbial community dynamics, and volatile fatty acid (VFA) profiles were analyzed. During S1 and S2, methane production was stable, achieving 446.3 ± 153.7 NL/kgVS and 773.4 ± 107.8 NL/kgVS, respectively. However, at S3, methane production declined, accompanied by a pH drop from 7.68 to 6.11, an increase in the FOS/TAC ratio from 0.272 to 0.35, and the accumulation of acetic and propionic acids at the end of the digestion cycle. Microbial analysis revealed that the abundance of Firmicutes increased with higher OLRs, reaching 93.6% in S3, while the Bacteroidota abundance decreased, reaching 3.0% in S3. During S1, methane production occurred through both acetoclastic and hydrogenotrophic pathways. Full article
(This article belongs to the Section A4: Bio-Energy)
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17 pages, 3127 KB  
Article
Will Dissolved Hydrogen Reveal the Instability of the Anaerobic Digestion Process?
by Daniela Platošová, Jiří Rusín, Radek Svoboda and Markéta Vašinková
Processes 2025, 13(1), 126; https://doi.org/10.3390/pr13010126 - 6 Jan 2025
Viewed by 1320
Abstract
Dissolved hydrogen is a critical factor in maintaining the delicate balance among microbial species that drive anaerobic digestion. Since previous findings have demonstrated a correlation between dissolved hydrogen concentration and volatile fatty acid (VFA) levels, we propose to evaluate the use of dissolved [...] Read more.
Dissolved hydrogen is a critical factor in maintaining the delicate balance among microbial species that drive anaerobic digestion. Since previous findings have demonstrated a correlation between dissolved hydrogen concentration and volatile fatty acid (VFA) levels, we propose to evaluate the use of dissolved hydrogen concentration in digestate as an alternative to traditional VFA measurements. The aim is to determine whether dissolved hydrogen could serve as a faster, more accurate, and more efficient indicator of process instability in anaerobic digestion. An integral part of this task also involves addressing the technical challenge of identifying a suitable sensor that meets our requirements. In this study, we evaluated the ratio of dissolved hydrogen concentration to Total Inorganic Carbon as a potential alternative to the traditional stability indicator, Volatile Fatty Acids/Total Inorganic Carbon (VFA/TIC), also referred to as Flüchtige Organische Säuren/Totales Anorganisches Carbonat (FOS/TAC). The single-stage anaerobic digestion process was carried out in a Terrafors IS rotary drum bioreactor for 150 days at an average temperature of 40 °C and an organic volatile load of 0.092 kg m−3 d−1. Corn silage was dosed on weekdays as the substrate. With a theoretical retention time of 45 days, a biogas production of 0.219 Nm3kgVs1 with a CH4 content of 31.6% was achieved. The values of the determined VFA/TIC stability indicator ranged from 0.22 to 5.66, with the highest values obtained when the reactor was overloaded. The dissolved hydrogen concentration ranged 0.005–0.196 mg dm3. The Pearson correlation coefficient was 0.337 and the Spearman correlation coefficient was 0.468. The amperometric microsensor has proven to be unsuitable for field applications due to its lack of sensitivity and short lifetime. The proposed ratio of dissolved hydrogen concentration to TIC did not prove to be significantly more effective than the established VFA/TIC indicator. Full article
(This article belongs to the Special Issue Bioreactor Design and Optimization Process)
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16 pages, 3483 KB  
Review
From Structure to Function: How Prebiotic Diversity Shapes Gut Integrity and Immune Balance
by Lucas de Freitas Pedrosa, Paul de Vos and João Paulo Fabi
Nutrients 2024, 16(24), 4286; https://doi.org/10.3390/nu16244286 - 12 Dec 2024
Viewed by 3380
Abstract
The microbiota stability, diversity, and composition are pillars for an efficient and beneficial symbiotic relationship between its host and itself. Microbial dysbiosis, a condition where a homeostatic bacterial community is disturbed by acute or chronic events, is a predisposition for many diseases, including [...] Read more.
The microbiota stability, diversity, and composition are pillars for an efficient and beneficial symbiotic relationship between its host and itself. Microbial dysbiosis, a condition where a homeostatic bacterial community is disturbed by acute or chronic events, is a predisposition for many diseases, including local and systemic inflammation that leads to metabolic syndrome, diabetes, and some types of cancers. Classical dysbiosis occurs in the large intestine. During this period, pathogenic strains can multiply, taking advantage of the compromised environment. This overgrowth triggers an exaggerated inflammatory response from the human immune system due to the weakened integrity of the intestinal barrier. Such inflammation can also directly influence higher polyp formation and/or tumorigenesis. Prebiotics can be instrumental in preventing or correcting dysbiosis. Prebiotics are molecules capable of serving as substrates for fermentation processes by gut microorganisms. This can promote returning the intestinal environment to homeostasis. Effective prebiotics are generally specific oligo- and polysaccharides, such as FOS or inulin. However, the direct effects of prebiotics on intestinal epithelial and immune cells must also be taken into consideration. This interaction happens with diverse prebiotic nondigestible carbohydrates, and they can inhibit or decrease the inflammatory response. The present work aims to elucidate and describe the different types of prebiotics, their influence, and their functionalities for health, primarily focusing on their ability to reduce and control inflammation in the intestinal epithelial barrier, gut, and systemic environments. Full article
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14 pages, 2400 KB  
Article
Boosting Fructosyl Transferase’s Thermostability and Catalytic Performance for Highly Efficient Fructooligosaccharides (FOS) Production
by Dandan Niu, Nan Zhao, Jun Wang, Nokuthula Peace Mchunu, Kugen Permaul, Suren Singh and Zhengxiang Wang
Foods 2024, 13(18), 2997; https://doi.org/10.3390/foods13182997 - 21 Sep 2024
Cited by 1 | Viewed by 1837
Abstract
Achieving enzymatic food processing at high substrate concentrations can significantly enhance production efficiency; however, related studies are notably insufficient. This study focused on the enzymatic synthesis of fructooligosaccharides (FOS) at high temperature and high substrate concentration. Results revealed that increased viscosity and limited [...] Read more.
Achieving enzymatic food processing at high substrate concentrations can significantly enhance production efficiency; however, related studies are notably insufficient. This study focused on the enzymatic synthesis of fructooligosaccharides (FOS) at high temperature and high substrate concentration. Results revealed that increased viscosity and limited substrate solubility in high-concentration systems could be alleviated by raising the reaction temperature, provided it aligned with the enzyme’s thermostability. Further analysis of enzyme thermostability in real sucrose solutions demonstrates that the enzyme’s thermostability was remarkedly improved at higher sucrose concentrations, evidenced by a 10.3 °C increase in melting temperature (Tm) in an 800 g/L sucrose solution. Building upon these findings, we developed a novel method for enzymatic FOS synthesis at elevated temperatures and high sucrose concentrations. Compared to existing commercial methods, the initial transglycosylation rate and volumetric productivity for FOS synthesis increased by 155.9% and 113.5%, respectively, at 65 °C in an 800 g/L sucrose solution. This study underscores the pivotal role of substrate concentration, incubation temperature, and the enzyme’s actual status in advancing enzyme-catalyzed processes and demonstrates the potential of enzymatic applications in enhancing food processing technologies, providing innovative strategies for the food industry. Full article
(This article belongs to the Section Food Biotechnology)
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19 pages, 10032 KB  
Article
Strategy in Synthesizing Longer-Chain Levan-Type Fructooligosaccharides by Selective Dextran Macromolecular Cross-Linked Bacillus lehensis G1 Endolevanase Aggregate Immobilization
by Hotaf Hassan Makki, Nardiah Rizwana Jaafar, Nashriq Jailani, Abdullah A. Alqasem, Zaidah Rahmat and Rosli Md. Illias
Catalysts 2024, 14(9), 584; https://doi.org/10.3390/catal14090584 - 1 Sep 2024
Viewed by 1135
Abstract
The formation of cross-linked enzyme aggregates (CLEAs) using macromolecular cross-linkers improves substrate accessibility and enhances enzyme retention. However, there have been few studies exploring the use of macromolecular cross-linkers due to the challenges related to cross-linker screening. In compliance with our previous computational [...] Read more.
The formation of cross-linked enzyme aggregates (CLEAs) using macromolecular cross-linkers improves substrate accessibility and enhances enzyme retention. However, there have been few studies exploring the use of macromolecular cross-linkers due to the challenges related to cross-linker screening. In compliance with our previous computational and experimental screening, dextran is the optimal macromolecular cross-linker to develop CLEAs of endolevanase from Bacillus lehensis G1 (rlevblg1-dex-CLEA) for levan-type-fructooligosaccharides (L-FOS) production. In this study, rlevblg1-dex-CLEAs was optimized, and the activity recovery continued to increase and reached 90.5%. Subsequently, the rlevblg1-dex-CLEAs were characterized and they displayed higher thermal stability after 1 h of incubation in comparison to the free enzyme. Moreover, the rlevblg1-dex-CLEAs were reusable for five cycles and exhibited greater storage stability over 180 days at 4 °C (60.9%) than that of free rlevblg1. In addition, the rlevblg1-dex-CLEAs demonstrated similar catalytic efficiency as the free enzyme and generated a substantial amount of L-FOS with a longer degree of polymerization, which is more beneficial for industrial use. Full article
(This article belongs to the Section Biocatalysis)
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39 pages, 2275 KB  
Review
Feasibility of Food Organics and Garden Organics as a Promising Source of Biomethane: A Review on Process Optimisation and Impact of Nanomaterials
by Shweta Mitra and Prasad Kaparaju
Energies 2024, 17(16), 4198; https://doi.org/10.3390/en17164198 - 22 Aug 2024
Cited by 4 | Viewed by 2231
Abstract
Anaerobic digestion (AD) of food waste (FW) is considered an environmentally sustainable process that can divert the disposal of FW to landfill and prevent greenhouse gas (GHG) emissions in managing the FW. Although several studies have attempted to demonstrate the AD of FW, [...] Read more.
Anaerobic digestion (AD) of food waste (FW) is considered an environmentally sustainable process that can divert the disposal of FW to landfill and prevent greenhouse gas (GHG) emissions in managing the FW. Although several studies have attempted to demonstrate the AD of FW, low methane yields and a high incidence of process instability have been reported due to the rapid generation and accumulation of volatile fatty acids (VFAs). This paper reviews the recent research and development with high variation in FW composition, such as the carbon-to-nitrogen (C/N) ratio and, consequently, the effect of its physicochemical composition on process performance and methane yields. The paper highlights the significance of optimizing the anaerobic co-digestion (AcoD) of FW with carbon-rich substrates such as garden waste (GW) and/or the addition of trace elements as strategies that can improve the process performance and methane yields from FW. This review focuses on the factors effecting the feasibility of food organics and garden organics (FOGO) as a substrate for methane production. The review also critically analyses the prospects of enhancement of biomethane yield by optimizations of the impactful parameters. The progress in research related to these methods and identifying existing limitations to efficient AD of FOGO are the key findings of this review. This review also assesses the impact of nanotechnology on the process performance of the digester. The integration of FO and GO in AD processes has demonstrated enhanced biogas yields, improved process stability, and better waste management outcomes compared to the digestion of either substrate alone. Despite these advantages, challenges such as feedstock variability, process optimization, and the need for advanced pretreatment methods remain. Addressing these issues through continued research and technological innovations will be crucial for maximizing the efficiency and scalability of AD systems. Moreover, the economic feasibility and policy frameworks supporting AD need further development to promote broader adoption. Full article
(This article belongs to the Special Issue Biomass Conversion Technologies: 3rd Edition)
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14 pages, 72398 KB  
Article
Development of Reconfigurable High-Frequency Devices Using Liquid Crystal in Substrate-Integrated Gap Waveguide Technology
by Aleksandr Andreyevich Voronov, Carmen Bachiller, Belén Villacampa and Vicente E. Boria
Crystals 2024, 14(8), 735; https://doi.org/10.3390/cryst14080735 - 19 Aug 2024
Cited by 2 | Viewed by 4527
Abstract
This article presents the theoretical study, numerical simulation and fabrication of a phase shifter and a stub resonator for use in microstrip ridge gap waveguide (MRGW) technology, using a liquid crystal (LC) in the substrate as a reconfigurable material. The phase shifter and [...] Read more.
This article presents the theoretical study, numerical simulation and fabrication of a phase shifter and a stub resonator for use in microstrip ridge gap waveguide (MRGW) technology, using a liquid crystal (LC) in the substrate as a reconfigurable material. The phase shifter and the stub resonator are filled with LC, and thanks to the LC’s dielectric anisotropy properties, the phase shift and the resonance response can be easily controlled using an external electric or magnetic bias field. The phase shifter was designed to operate in the range of 10 to 20 GHz, and the resonator was designed to operate in the range of 7.8 to 8.8 GHz. The phase shifter’s responses (including both phase shift and insertion losses), associated with both the parallel and perpendicular permittivity values of the LC, were computed and measured, and then the corresponding figure of merit (FoM) was extracted. The resonator’s frequency responses, associated with both the LC’s parallel and perpendicular permittivity, were computed. The resonator’s frequency responses, which provided different polarization voltages, were measured and compared to the simulation results. All technological issues related to both prototypes are also discussed here. The good agreement between the simulation and measurement results confirm this technology as a viable approach to the practical implementation of these microwave reconfigurable devices. Full article
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34 pages, 3450 KB  
Review
Revolutionizing Renewable Resources: Cutting-Edge Trends and Future Prospects in the Valorization of Oligosaccharides
by Ramachandran Chelliah, Nam Hyeon Kim, SeonJu Park, Younseo Park, Su-Jung Yeon, Kaliyan Barathikannan, Selvakumar Vijayalakshmi and Deog-Hwan Oh
Fermentation 2024, 10(4), 195; https://doi.org/10.3390/fermentation10040195 - 2 Apr 2024
Cited by 8 | Viewed by 3384
Abstract
Lignocellulosic wastes, primarily from agricultural by-products, are a renewable resource increasingly used in the sustainable production of oligosaccharides, significantly contributing to the growing bioeconomy. This innovative utilization of biological resources aligns with the global shift towards sustainable development, focusing on creating products such [...] Read more.
Lignocellulosic wastes, primarily from agricultural by-products, are a renewable resource increasingly used in the sustainable production of oligosaccharides, significantly contributing to the growing bioeconomy. This innovative utilization of biological resources aligns with the global shift towards sustainable development, focusing on creating products such as food, feed, and bioenergy from renewable sources. Oligosaccharides, specialized carbohydrates, are synthesized either chemically or more eco-friendly, biologically. Biological synthesis often involves enzymes or whole-cell systems to transform lignocellulosic wastes into these valuable sugars. As functional food supplements, oligosaccharides play a crucial role in human and animal health. They serve as prebiotics, indigestible components that promote the proliferation of beneficial gut microbiota, especially within the colon. This positive impact on gut flora is essential for boosting the immune system and regulating physiological functions. Important prebiotics, including galactooligosaccharides (GOS), xylooligosaccharides (XOS), fructooligosaccharides (FOS), mannan-oligosaccharides (MOS), and isomaltooligosaccharides (IMOS), are produced through methods involving enzymes or the use of whole cells, with agricultural waste as substrates. Recent advancements focus on refining these biological processes for oligosaccharide synthesis using lignocellulosic substrates, emphasizing the principles of a circular bioeconomy, which promotes resource reuse and recycling. This review highlights the potential and challenges in the biological synthesis of oligosaccharides from renewable resources. It underscores the need for innovation in process optimization and commercialization strategies to fully exploit lignocellulosic wastes. This approach not only contributes to sustainable product development, but also opens new avenues for the profitable and environmentally friendly utilization of agricultural residues, marking a significant step forward in the bio-based industry. Full article
(This article belongs to the Special Issue Biotechnological Valorization Approaches for Food Waste)
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16 pages, 3859 KB  
Article
Transcriptome and Metabolome Analyses Provide Insight into the Glucose-Induced Adipogenesis in Porcine Adipocytes
by Susu Jiang, Guohua Zhang, Jian Miao, Dianhu Wu, Ximei Li, Jiawei Li, Jianxiong Lu and Shuangbao Gun
Curr. Issues Mol. Biol. 2024, 46(3), 2027-2042; https://doi.org/10.3390/cimb46030131 - 3 Mar 2024
Cited by 4 | Viewed by 1667
Abstract
Glucose is a major energy substrate for porcine adipocytes and also serves as a regulatory signal for adipogenesis and lipid metabolism. In this study, we combined transcriptome and metabolome analyses to reveal the underlying regulatory mechanisms of high glucose (HG) on adipogenesis by [...] Read more.
Glucose is a major energy substrate for porcine adipocytes and also serves as a regulatory signal for adipogenesis and lipid metabolism. In this study, we combined transcriptome and metabolome analyses to reveal the underlying regulatory mechanisms of high glucose (HG) on adipogenesis by comparing differentially expressed genes (DEGs) and differentially accumulated metabolites (DAMs) identified in porcine adipocytes. Results showed that HG (20 mmol/L) significantly increased fat accumulation in porcine adipocytes compared to low glucose (LG, 5 mmol/L). A total of 843 DEGs and 365 DAMs were identified. Functional enrichment analyses of DEGs found that multiple pathways were related to adipogenesis, lipid metabolism, and immune-inflammatory responses. PPARγ, C/EBPα, ChREBP, and FOS were identified as the key hub genes through module 3 analysis, and PPARγ acted as a central regulator by linking genes involved in lipid metabolism and immune-inflammatory responses. Gene-metabolite networks found that PPARγ-13-HODE was the most important interaction relationship. These results revealed that PPARγ could mediate the cross-talk between adipogenesis and the immune-inflammatory response during adipocyte maturation. This work provides a comprehensive view of the regulatory mechanisms of glucose on adipogenesis in porcine adipocytes. Full article
(This article belongs to the Section Biochemistry, Molecular and Cellular Biology)
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15 pages, 4741 KB  
Article
Radiation Damage on Selenomethionine-Substituted Single-Domain Substrate-Binding Protein
by Ki Hyun Nam
Crystals 2023, 13(12), 1620; https://doi.org/10.3390/cryst13121620 - 22 Nov 2023
Cited by 5 | Viewed by 1732
Abstract
Radiation damage is an inherent challenge in macromolecular crystallography (MX). This diminishes the diffraction quality and also compromises the accuracy of the crystal structure. Investigating the impact of radiation damage on the crystal quality and structure can offer valuable insights into the structural [...] Read more.
Radiation damage is an inherent challenge in macromolecular crystallography (MX). This diminishes the diffraction quality and also compromises the accuracy of the crystal structure. Investigating the impact of radiation damage on the crystal quality and structure can offer valuable insights into the structural interpretation and data collection strategy. Selenomethionine (SeMet, Mse) is an amino acid that exists in nature and contains a high-Z atom, i.e., selenium (Se), which is sensitive to radiation damage; however, little is known regarding the radiation damage of this amino acid. To better understand the radiation damage that affects SeMet, we investigated the radiation damage to a SeMet-substituted substrate-binding protein from Rhodothermus marinus. As the X-ray dose increased, the quality of the data statistics deteriorated. In particular, an increase in the X-ray dose increased the negative Fo-Fc electron density map near the Se atom of the Mse residue, while no negative Fo-Fc electron density map was observed in the other atoms (O, C, and N). Radiation damage increased the absolute B-factor value of the Se atom in the Mse residue, which was higher than that of the other atoms. This indicates that Se is more sensitive to radiation damage than other atoms. These results will contribute to advancing our knowledge of the radiation damage that can occur in MX. Full article
(This article belongs to the Section Macromolecular Crystals)
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38 pages, 3896 KB  
Review
A Comprehensive Review of Performance of Polyacrylonitrile-Based Membranes for Forward Osmosis Water Separation and Purification Process
by Nada Abounahia, Arqam Azad Shahab, Maryam Mohammad Khan, Hazim Qiblawey and Syed Javaid Zaidi
Membranes 2023, 13(11), 872; https://doi.org/10.3390/membranes13110872 - 3 Nov 2023
Cited by 10 | Viewed by 5656
Abstract
Polyacrylonitrile (PAN), with its unique chemical, electrical, mechanical, and thermal properties, has become a crucial acrylic polymer for the industry. This polymer has been widely used to fabricate ultrafiltration, nanofiltration, and reverse osmosis membranes for water treatment applications. However, it recently started to [...] Read more.
Polyacrylonitrile (PAN), with its unique chemical, electrical, mechanical, and thermal properties, has become a crucial acrylic polymer for the industry. This polymer has been widely used to fabricate ultrafiltration, nanofiltration, and reverse osmosis membranes for water treatment applications. However, it recently started to be used to fabricate thin-film composite (TFC) and fiber-based forward osmosis (FO) membranes at a lab scale. Phase inversion and electrospinning methods were the most utilized techniques to fabricate PAN-based FO membranes. The PAN substrate layer could function as a good support layer to create TFC and fiber membranes with excellent performance under FO process conditions by selecting the proper modification techniques. The various modification techniques used to enhance PAN-based FO performance include interfacial polymerization, layer-by-layer assembly, simple coating, and incorporating nanofillers. Thus, the fabrication and modification techniques of PAN-based porous FO membranes have been highlighted in this work. Also, the performance of these FO membranes was investigated. Finally, perspectives and potential directions for further study on PAN-based FO membranes are presented in light of the developments in this area. This review is expected to aid the scientific community in creating novel effective porous FO polymeric membranes based on PAN polymer for various water and wastewater treatment applications. Full article
(This article belongs to the Special Issue Membranes Desalination of Sea/Brackish Water)
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11 pages, 3729 KB  
Article
Generalized Concept and MATLAB Code for Modeling and Analyzing Wideband 90° Stub-Loaded Phase Shifters with Simulation and Experimental Verifications
by Falih M. Alnahwi, Yasir I. A. Al-Yasir, Chan Hwang See, Abdulkareem S. Abdullah and Raed A. Abd-Alhameed
Sensors 2023, 23(18), 7773; https://doi.org/10.3390/s23187773 - 9 Sep 2023
Cited by 1 | Viewed by 1942
Abstract
In the design of phase shifters, the modeling equations are too complicated and require some approximations to be derived correctly by hand. In response to this problem, this paper presents a generalized concept, algorithm, and MATLAB code that provide the exact modeling equations [...] Read more.
In the design of phase shifters, the modeling equations are too complicated and require some approximations to be derived correctly by hand. In response to this problem, this paper presents a generalized concept, algorithm, and MATLAB code that provide the exact modeling equations of the transmission parameters and the scattering parameters of any 90° wideband stub-loaded phase shifter. The proposed code gives the modeling equations in term of variables for any number of stubs and characteristic impedance value by utilizing the symbol-based analysis of the MATLAB code. It also illustrates the results as a function of normalized frequency relative to the center frequency fo, and can be and can be tailored to any user-defined frequency range. As a matter of comparison, a three-stub wideband 90° stub-loaded phase shifter is simulated using CST Microwave Studio and experimentally fabricated on Rogers RT5880 dielectric substrate with dimensions of 30 × 40 × 0.8 mm3. The comparison reveals the accuracy of the proposed computerized modeling with −10 dB impedance bandwidth equal to 90% (0.55fo–1.45fo), (90°∓5°) phase difference bandwidth equal to 100% (0.5fo–1.5fo), and negligible insertion loss. The novelty of this work is that the proposed code provides the exact modeling equations of the stub-loaded phase shifter for any number of stubs regardless the complexity of the mathematical derivations. Full article
(This article belongs to the Special Issue Advanced RF/Microwave Electronics for Upcoming Wireless Generations)
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