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Keywords = classical occupancy distribution

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19 pages, 3395 KiB  
Article
Hybrid Whole Genomes of Brucella melitensis from Tunisian Animal Isolates: Virulence Factors, Antimicrobial Susceptibility, and Phylogeny
by Ibtihel Ben Abdallah, Germán Kopprio, Awatef Béjaoui, Susanne Köhler, Kaouther Guesmi, Sana Kalthoum, Jacob Gatz, Amel Arfaoui, Monia Lachtar, Haikel Hajlaoui, Mohamed Naceur Baccar, Holger Scholz and Abderrazak Maaroufi
Microorganisms 2025, 13(7), 1651; https://doi.org/10.3390/microorganisms13071651 - 12 Jul 2025
Viewed by 529
Abstract
Brucellosis remains endemic in Tunisia, causing abortions in small ruminants, and represents a public health threat through occupational exposure and the consumption of contaminated animal products. The aims of this study are to assess the antibiotic susceptibility of two Brucella melitensis isolates (TATA [...] Read more.
Brucellosis remains endemic in Tunisia, causing abortions in small ruminants, and represents a public health threat through occupational exposure and the consumption of contaminated animal products. The aims of this study are to assess the antibiotic susceptibility of two Brucella melitensis isolates (TATA and SBZ) from aborted sheep, to analyze their genomes using hybrid whole-genome sequencing, and to investigate their antimicrobial resistance (AMR), potential virulence factors (VFs), and phylogenetic relationships. Both isolates were phenotypically confirmed to be susceptible to doxycycline, gentamicin, rifampicin, streptomycin, and trimethoprim–sulfamethoxazole, and no corresponding classical AMR genes were identified. However, several potential AMR-related genes (mprF, bepCDEFG, qacG, and adeF) and a mutation in the parC gene were detected. The analysis of the genotypes revealed 74 potential virulence genes, primarily involved in lipopolysaccharide synthesis and type IV secretion systems. Genomic comparison showed over 99% nucleotide identity between the Tunisian strains, B. melitensis bv. 1 16M and B. melitensis bv. 3 Ether. Five gene clusters, including three hypothetical proteins with 100% identity, were detected exclusively in the TATA and SBZ strains. Additionally, two unique gene clusters were identified in SBZ: a rhodocoxin reductase and another hypothetical protein. Both isolates were assigned to sequence types ST11 and ST89. Core-genome-based phylogenetic analysis clustered both strains with biovar 3 and ordered the Tunisian strains into two distinct groups: TATA within Tunisian Cluster 1 is closely related to strains from Egypt and Italy, while SBZ near MST Cluster 4 is more related to isolates from Austria and two outliers from Italy and Tunisia. This study provides the first genomic characterization of B. melitensis from aborted sheep in Tunisia and offers valuable insights into AMR, virulence, and phylogenetic distribution. Full article
(This article belongs to the Special Issue Epidemiology and Control Strategies for Brucellosis)
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23 pages, 1561 KiB  
Perspective
Positive and Negative Ecology, a Conceptual Overview
by Hugh D. Loxdale
Ecologies 2025, 6(2), 33; https://doi.org/10.3390/ecologies6020033 - 22 Apr 2025
Viewed by 1146
Abstract
Animal populations, even among common species, often exhibit demographic heterogeneity. This is particularly evident in species with metapopulation structures, where geographically distinct subpopulations experience varying degrees of inbreeding due to limited interbreeding. A phenomenon termed ‘negative ecology’ highlights cases where species, despite suitable [...] Read more.
Animal populations, even among common species, often exhibit demographic heterogeneity. This is particularly evident in species with metapopulation structures, where geographically distinct subpopulations experience varying degrees of inbreeding due to limited interbreeding. A phenomenon termed ‘negative ecology’ highlights cases where species, despite suitable habitat availability, display fragmented distributions within small geographic areas (<20 km2). These subpopulations, however, do not conform to classic metapopulation dynamics, as even vagile species such as birds can theoretically move freely between them. Similar patterns emerge at larger scales (>100 km2) in birds and butterflies, suggesting ecological constraints—either abiotic or biotic—underpin these structured distributions. Understanding these constraints is essential, particularly in conservation efforts. The principles of positive (extant) and negative (locally absent/extinct) ecology have profound implications for species re-introductions, as historical occupancy does not guarantee successful re-establishment. Abiotic and biotic factors may hinder the recolonization of previously inhabited or entirely new habitats. This article primarily explores the ecological forces shaping such fragmented distributions in birds and butterflies, two especially well-studied taxa in the UK and mainland Europe, in the hope that such a new perspective may thereby contribute to broader conservation and ecological restoration strategies. Full article
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14 pages, 32807 KiB  
Article
CO2 and SO2 Capture by Cryptophane-111 Porous Liquid: Insights from Molecular Dynamics Simulations and Computational Chemistry
by Pablo Collado, Manuel M. Piñeiro and Martín Pérez-Rodríguez
Nanomaterials 2025, 15(8), 616; https://doi.org/10.3390/nano15080616 - 17 Apr 2025
Viewed by 690
Abstract
A computational study of the encapsulation of a gaseous mixture of CO2 and SO2 in a Type II porous liquid is performed under different conditions. The system is composed of cryptophane-111 molecules dispersed in dichloromethane, and it is described using classic [...] Read more.
A computational study of the encapsulation of a gaseous mixture of CO2 and SO2 in a Type II porous liquid is performed under different conditions. The system is composed of cryptophane-111 molecules dispersed in dichloromethane, and it is described using classic molecular dynamics at atomistic resolution. Gaseous CO2 tends to almost fully occupy cryptophane-111’s cavities during the first phases of simulation, and, afterwards, it is surpassed by SO2’s tendency for occupation. Calculations are performed at five different temperatures in the range of 273 K–310 K, finding a positive correlation between SO2 adsorption and temperature. An evaluation of the radial distribution function of SO2 and CO2 with respect to cryptophane-111 is employed to quantify the number of captured molecules, and an energy study using Density Functional Theory methods is also performed to evaluate the relative stability of the two gases inside the porous liquid. Full article
(This article belongs to the Section Theory and Simulation of Nanostructures)
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14 pages, 297 KiB  
Article
Entropy of the Canonical Occupancy (Macro) State in the Quantum Measurement Theory
by Arnaldo Spalvieri
Entropy 2024, 26(2), 107; https://doi.org/10.3390/e26020107 - 24 Jan 2024
Cited by 1 | Viewed by 1365
Abstract
The paper analyzes the probability distribution of the occupancy numbers and the entropy of a system at the equilibrium composed by an arbitrary number of non-interacting bosons. The probability distribution is obtained through two approaches: one involves tracing out the environment from a [...] Read more.
The paper analyzes the probability distribution of the occupancy numbers and the entropy of a system at the equilibrium composed by an arbitrary number of non-interacting bosons. The probability distribution is obtained through two approaches: one involves tracing out the environment from a bosonic eigenstate of the combined environment and system of interest (the empirical approach), while the other involves tracing out the environment from the mixed state of the combined environment and system of interest (the Bayesian approach). In the thermodynamic limit, the two coincide and are equal to the multinomial distribution. Furthermore, the paper proposes to identify the physical entropy of the bosonic system with the Shannon entropy of the occupancy numbers, fixing certain contradictions that arise in the classical analysis of thermodynamic entropy. Finally, by leveraging an information-theoretic inequality between the entropy of the multinomial distribution and the entropy of the multivariate hypergeometric distribution, Bayesianism of information theory and empiricism of statistical mechanics are integrated into a common “infomechanical” framework. Full article
(This article belongs to the Section Information Theory, Probability and Statistics)
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25 pages, 5232 KiB  
Article
AIBot: A Novel Botnet Capable of Performing Distributed Artificial Intelligence Computing
by Hao Zhao, Hui Shu, Yuyao Huang and Ju Yang
Electronics 2022, 11(19), 3241; https://doi.org/10.3390/electronics11193241 - 9 Oct 2022
Cited by 1 | Viewed by 3818
Abstract
As an infrastructure platform for launching large-scale cyber attacks, botnets are one of the biggest threats to cyberspace security today. With the development of network technology and changes in the network environment, network attack intelligence has become a trend, and botnet designers are [...] Read more.
As an infrastructure platform for launching large-scale cyber attacks, botnets are one of the biggest threats to cyberspace security today. With the development of network technology and changes in the network environment, network attack intelligence has become a trend, and botnet designers are also committed to developing more destructive intelligent botnets. The feasibility of implementing distributed intelligent computing based on botnet node resources is analyzed with regard to the aspects of program size, communication traffic and resource occupancy. AIBot, a botnet model that can perform intelligent computation in a distributed manner, is proposed from the attacker’s perspective, which hierarchically deploys distributed neural network models in the botnet, thereby organizing nodes to collaboratively perform intelligent computation tasks. AIBot enables the distributed execution of intelligent computing tasks on a cluster of bot nodes by decomposing the computational load of a deep neural network model. A general algorithm for the distributed deployment of neural networks in AIBot is proposed, and the overall operational framework for AIBot is given. Two classical neural network models, CNN and RNN, are used as examples to illustrate specific schemes for deploying and running distributed intelligent computing in AIBot. Experimental scenarios were constructed to experimentally validate and briefly evaluate the performance of the two AIBot attack modes, and the overall efficiency of AIBot was evaluated in terms of execution time. This paper studies new forms of botnet attack techniques from a predictive perspective, aiming to increase defenders’ understanding of potential botnet threats, in order to propose effective defense strategies and improve the botnet defense system. Full article
(This article belongs to the Special Issue New Trends in Information Security)
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16 pages, 377 KiB  
Article
Psychological Burdens among Teachers in Germany during the SARS-CoV-2 Pandemic—Subgroup Analysis from a Nationwide Cross-Sectional Online Survey
by Clemens Koestner, Viktoria Eggert, Theresa Dicks, Kristin Kalo, Carolina Zähme, Pavel Dietz, Stephan Letzel and Till Beutel
Int. J. Environ. Res. Public Health 2022, 19(15), 9773; https://doi.org/10.3390/ijerph19159773 - 8 Aug 2022
Cited by 10 | Viewed by 3257
Abstract
Background: Schools underwent massive changes during the SARS-CoV-2 pandemic worldwide. Besides existing occupational health challenges, teachers had to deal with biological and psychological burdens that had the potential to impact their psychological well-being. The aim of the present study was to (i) assess [...] Read more.
Background: Schools underwent massive changes during the SARS-CoV-2 pandemic worldwide. Besides existing occupational health challenges, teachers had to deal with biological and psychological burdens that had the potential to impact their psychological well-being. The aim of the present study was to (i) assess the current state of psychological burdens in German teachers and (ii) identify highly burdened subgroups to derive and address interventions. Methods: A nationwide cross-sectional online survey was conducted among teachers at all school types in Germany in March 2021. Data on psychological strains were assessed using established (e.g., PHQ-4) and new—pandemic-specific—(e.g., COVID-19-associated anxieties) instruments. ANOVAs and Tukey’s post hoc tests were used to identify highly burdened subgroups (e.g., gender, age, and number of risk factors for severe courses of COVID-19) of teachers. Results: Psychological burdens in German teachers (N = 31.089) exceeded the level of the general population, for example, regarding symptoms of depression (PHQ-2, M = 1.93 vs. 1.24) or generalized anxiety (GAD-2, M = 1.72 vs. 1.03). Subgroup analysis revealed that psychological burdens were unevenly distributed among different groups of teachers; for example, younger teachers (18–30 years) showed more depression symptoms compared with their older colleagues (56–67 years) (PHQ-2, M = 2.01 vs. 1.78). Conclusions: The online survey was conducted during the “third wave” of SARS-CoV-2 in Germany, which might have influenced risk perception and psychological strains. Future studies at different times, ideally longitudinal monitoring of the mental health of teachers, are recommended. Based on our results, evidence-based subgroup-specific interventions should be implemented to sustain teachers’ mental health; for example, younger teachers or teachers with risk factors for a severe course of COVID-19 should receive special attention and support. Teachers from special needs schools whose mental health is, on average, good could also be a starting point for identifying the health promotion structural elements of this school type (e.g., fewer students per teacher). However, beyond the specific pandemic-related psychological burdens, the classic occupational health challenges of physical, biological, and chemical stress and their resulting strains should not be disregarded. Full article
(This article belongs to the Special Issue COVID-19 and Mental Health in the Educational Field)
31 pages, 708 KiB  
Article
Probability Models of Distributed Proof Generation for zk-SNARK-Based Blockchains
by Yuri Bespalov, Alberto Garoffolo, Lyudmila Kovalchuk, Hanna Nelasa and Roman Oliynykov
Mathematics 2021, 9(23), 3016; https://doi.org/10.3390/math9233016 - 24 Nov 2021
Cited by 8 | Viewed by 4025
Abstract
The paper is devoted to the investigation of the distributed proof generation process, which makes use of recursive zk-SNARKs. Such distributed proof generation, where recursive zk-SNARK-proofs are organized in perfect Mercle trees, was for the first time proposed in Latus consensus protocol for [...] Read more.
The paper is devoted to the investigation of the distributed proof generation process, which makes use of recursive zk-SNARKs. Such distributed proof generation, where recursive zk-SNARK-proofs are organized in perfect Mercle trees, was for the first time proposed in Latus consensus protocol for zk-SNARKs-based sidechains. We consider two models of a such proof generation process: the simplified one, where all proofs are independent (like one level of tree), and its natural generation, where proofs are organized in partially ordered set (poset), according to tree structure. Using discrete Markov chains for modeling of corresponding proof generation process, we obtained the recurrent formulas for the expectation and variance of the number of steps needed to generate a certain number of independent proofs by a given number of provers. We asymptotically represent the expectation as a function of the one variable n/m, where n is the number of provers m is the number of proofs (leaves of tree). Using results obtained, we give numerical recommendation about the number of transactions, which should be included in the current block, idepending on the network parameters, such as time slot duration, number of provers, time needed for proof generation, etc. Full article
(This article belongs to the Special Issue Advances in Blockchain Technology)
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35 pages, 1068 KiB  
Article
Statistical Mechanics and Thermodynamics: Boltzmann’s versus Planck’s State Definitions and Counting
by Peter Enders
Entropy 2021, 23(7), 875; https://doi.org/10.3390/e23070875 - 8 Jul 2021
Cited by 1 | Viewed by 3190
Abstract
During the physical foundation of his radiation formula in his December 1900 talk and subsequent 1901 article, Planck refers to Boltzmann’s 1877 combinatorial-probabilistic treatment and obtains his quantum distribution function, while Boltzmann did not. For this, Boltzmann’s memoirs are usually ascribed to classical [...] Read more.
During the physical foundation of his radiation formula in his December 1900 talk and subsequent 1901 article, Planck refers to Boltzmann’s 1877 combinatorial-probabilistic treatment and obtains his quantum distribution function, while Boltzmann did not. For this, Boltzmann’s memoirs are usually ascribed to classical statistical mechanics. Agreeing with Bach, it is shown that Boltzmann’s 1868 and 1877 calculations can lead to a Planckian distribution function, where those of 1868 are even closer to Planck than that of 1877. Boltzmann’s and Planck’s calculations are compared based on Bach’s three-level scheme ‘configuration–occupation–occupancy’. Special attention is paid to the concepts of interchangeability and the indistinguishability of particles and states. In contrast to Bach, the level of exposition is most elementary. I hope to make Boltzmann’s work better known in English and to remove misunderstandings in the literature. Full article
(This article belongs to the Special Issue The Foundations of Thermodynamics)
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15 pages, 3941 KiB  
Article
Evaluation of the Vertical Sky Component without Obstructions for Daylighting in Burgos, Spain
by Diego Granados-López, Montserrat Díez-Mediavilla, M. Isabel Dieste-Velasco, Andrés Suárez-García and Cristina Alonso-Tristán
Appl. Sci. 2020, 10(9), 3095; https://doi.org/10.3390/app10093095 - 29 Apr 2020
Cited by 10 | Viewed by 5750
Abstract
Daylight availability knowledge is the first step for an energetic and visually efficient building and city design. It can be estimated with the Vertical Sky Component (VSC), which is defined as the ratio of the vertical diffuse illuminance over the unobstructed horizontal diffuse [...] Read more.
Daylight availability knowledge is the first step for an energetic and visually efficient building and city design. It can be estimated with the Vertical Sky Component (VSC), which is defined as the ratio of the vertical diffuse illuminance over the unobstructed horizontal diffuse illuminance, simultaneously measured at the same point. These illuminance magnitudes are obtained from luxmeter measurements but these data are scarce. Alternatively, VSC can be obtained from prior knowledge of the sky illuminance distribution, which can be measured with a sky scanner device or by reference to the CIE (Commission Internationale de L’Éclairage) Standard classification for homogeneous skies. Both approaches are compared in this study. The coherence of the results obtained for the four cardinal orientations are analyzed by applying classical statistical parameters and luxmeter measurements as references for the results. The measurement campaign was completed between September 2016 and January 2019 in Burgos (Spain), as representative case study and specific contribution of this work. It was observed that the VSC values were higher than 100 in many cases: 21.94% for the south- and 33.6% for the east-facing vertical surfaces. The study highlights the good daylighting conditions in Burgos, mainly due to the predominance of clear skies over much of the year. This fact implies high daylight availability that, with efficient city planning and building design, could potentially lead reduction energy consumption of buildings, improvements in visual comfort, and the well-being of occupants. Full article
(This article belongs to the Special Issue Solar Radiation: Measurements and Modelling, Effects and Applications)
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13 pages, 1596 KiB  
Article
VCC-DASH: A Video Content Complexity-Aware DASH Bitrate Adaptation Strategy
by Juzheng Duan, Min Zhang, Jing Wang, Shuai Han, Xun Chen and Xiaolong Yang
Electronics 2020, 9(2), 230; https://doi.org/10.3390/electronics9020230 - 31 Jan 2020
Cited by 2 | Viewed by 2989
Abstract
Traditional DASH (dynamic adaptation streaming over HTTP(i.e., HyperText Transfer Protocol)) bitrate strategy cannot differentiate segments with different complexities of video content, resulting in the user’s QoE (quality of experience) of segments with high content complexity as worse than that with low content complexity. [...] Read more.
Traditional DASH (dynamic adaptation streaming over HTTP(i.e., HyperText Transfer Protocol)) bitrate strategy cannot differentiate segments with different complexities of video content, resulting in the user’s QoE (quality of experience) of segments with high content complexity as worse than that with low content complexity. In case of this, this paper firstly studies video coding and puts forward the definition of video content complexity. Then the effects of content complexity on user’s QoE is analyzed and the QoE utility function of the segment is formulated based on its MOS (mean opinion score, related to the content complexity and bitrate) and bitrate switching between consecutive segments. Last, in order to maximize user’s QoE, this paper proposes VCC-DASH (video content complexity-aware DASH bitrate adaptation strategy) under the constraints of the network bandwidth and the buffer occupancy. In simulations, we compare VCC-DASH with the classical bitrate adaptation strategy proposed by Liu et al. (LIU’s strategy, for short). The simulation results show that the two strategies have similar performances in bitrate switching numbers, playback interruption times, and buffer lengths. In addition, it is more important for simulation results to reveal that VCC-DASH’s average bitrate is much higher than that of LIU’s strategy, which means that VCC-DASH can make fuller use of the network bandwidth than LIU’s strategy does. Moreover, the MOS distribution of the VCC-DASH is more concentrated on the better scores “4~5”, which profit from its content complexity-aware adaptation to allocate more bandwidth resources to high-complexity segments. Full article
(This article belongs to the Section Computer Science & Engineering)
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32 pages, 477 KiB  
Review
Thermal BEC Black Holes
by Roberto Casadio, Andrea Giugno, Octavian Micu and Alessio Orlandi
Entropy 2015, 17(10), 6893-6924; https://doi.org/10.3390/e17106893 - 15 Oct 2015
Cited by 31 | Viewed by 6772
Abstract
We review some features of Bose–Einstein condensate (BEC) models of black holes obtained by means of the horizon wave function formalism. We consider the Klein–Gordon equation for a toy graviton field coupled to a static matter current in a spherically-symmetric setup. The classical [...] Read more.
We review some features of Bose–Einstein condensate (BEC) models of black holes obtained by means of the horizon wave function formalism. We consider the Klein–Gordon equation for a toy graviton field coupled to a static matter current in a spherically-symmetric setup. The classical field reproduces the Newtonian potential generated by the matter source, while the corresponding quantum state is given by a coherent superposition of scalar modes with a continuous occupation number. An attractive self-interaction is needed for bound states to form, the case in which one finds that (approximately) one mode is allowed, and the system of N bosons can be self-confined in a volume of the size of the Schwarzschild radius. The horizon wave function formalism is then used to show that the radius of such a system corresponds to a proper horizon. The uncertainty in the size of the horizon is related to the typical energy of Hawking modes: it decreases with the increasing of the black hole mass (larger number of gravitons), resulting in agreement with the semiclassical calculations and which does not hold for a single very massive particle. The spectrum of these systems has two components: a discrete ground state of energy m (the bosons forming the black hole) and a continuous spectrum with energy ω > m (representing the Hawking radiation and modeled with a Planckian distribution at the expected Hawking temperature). Assuming the main effect of the internal scatterings is the Hawking radiation, the N-particle state can be collectively described by a single-particle wave-function given by a superposition of a total ground state with energy M = Nm and Entropy 2015, 17 6894 a Planckian distribution for E > M at the same Hawking temperature. This can be used to compute the partition function and to find the usual area law for the entropy, with a logarithmic correction related to the Hawking component. The backreaction of modes with ω > m is also shown to reduce the Hawking flux. The above corrections suggest that for black holes in this quantum state, the evaporation properly stops for a vanishing mass. Full article
(This article belongs to the Special Issue Entropy in Quantum Gravity and Quantum Cosmology)
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