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Keywords = reproductive uncertainty

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30 pages, 8552 KB  
Article
Analytical–Computational Integration of Equivalent Circuit Modeling, Hybrid Optimization, and Statistical Validation for Electrochemical Impedance Spectroscopy
by Francisco Augusto Nuñez Perez
Electrochem 2025, 6(4), 35; https://doi.org/10.3390/electrochem6040035 - 8 Oct 2025
Viewed by 113
Abstract
Background: Electrochemical impedance spectroscopy (EIS) is indispensable for disentangling charge-transfer, capacitive, and diffusive phenomena, yet reproducible parameter estimation and objective model selection remain unsettled. Methods: We derive closed-form impedances and analytical Jacobians for seven equivalent-circuit models (Randles, constant-phase element (CPE), and Warburg impedance [...] Read more.
Background: Electrochemical impedance spectroscopy (EIS) is indispensable for disentangling charge-transfer, capacitive, and diffusive phenomena, yet reproducible parameter estimation and objective model selection remain unsettled. Methods: We derive closed-form impedances and analytical Jacobians for seven equivalent-circuit models (Randles, constant-phase element (CPE), and Warburg impedance (ZW) variants), enforce physical bounds, and fit synthetic spectra with 2.5% and 5.0% Gaussian noise using hybrid optimization (Differential Evolution (DE) → Levenberg–Marquardt (LM)). Uncertainty is quantified via non-parametric bootstrap; parsimony is assessed with root-mean-square error (RMSE), Akaike Information Criterion (AIC), and Bayesian Information Criterion (BIC); physical consistency is checked by Kramers–Kronig (KK) diagnostics. Results: Solution resistance (Rs) and charge-transfer resistance (Rct) are consistently identifiable across noise levels. CPE parameters (Q,n) and diffusion amplitude (σ) exhibit expected collinearity unless the frequency window excites both processes. Randles suffices for ideal interfaces; Randles+CPE lowers AIC when non-ideality and/or higher noise dominate; adding Warburg reproduces the 45 tail and improves likelihood when diffusion is present. The (Rct+ZW)CPE architecture offers the best trade-off when heterogeneity and diffusion coexist. Conclusions: The framework unifies analytical derivations, hybrid optimization, and rigorous statistics to deliver traceable, reproducible EIS analysis and clear applicability domains, reducing subjective model choice. All code, data, and settings are released to enable exact reproduction. Full article
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28 pages, 924 KB  
Article
Hybrid Fuzzy Fractional for Multi-Phasic Epidemics: The Omicron–Malaria Case Study
by Mohamed S. Algolam, Ashraf A. Qurtam, Mohammed Almalahi, Khaled Aldwoah, Mesfer H. Alqahtani, Alawia Adam and Salahedden Omer Ali
Fractal Fract. 2025, 9(10), 643; https://doi.org/10.3390/fractalfract9100643 - 1 Oct 2025
Viewed by 221
Abstract
This study introduces a novel Fuzzy Piecewise Fractional Derivative (FPFD) framework to enhance epidemiological modeling, specifically for the multi-phasic co-infection dynamics of Omicron and malaria. We address the limitations of traditional models by incorporating two key realities. First, we use fuzzy set theory [...] Read more.
This study introduces a novel Fuzzy Piecewise Fractional Derivative (FPFD) framework to enhance epidemiological modeling, specifically for the multi-phasic co-infection dynamics of Omicron and malaria. We address the limitations of traditional models by incorporating two key realities. First, we use fuzzy set theory to manage the inherent uncertainty in biological parameters. Second, we employ piecewise fractional operators to capture the dynamic, phase-dependent nature of epidemics. The framework utilizes a fuzzy classical derivative for initial memoryless spread and transitions to a fuzzy Atangana–Baleanu–Caputo (ABC) fractional derivative to capture post-intervention memory effects. We establish the mathematical rigor of the FPFD model through proofs of positivity, boundedness, and stability of equilibrium points, including the basic reproductive number (R0). A hybrid numerical scheme, combining Fuzzy Runge–Kutta and Fuzzy Fractional Adams–Bashforth–Moulton algorithms, is developed for solving the system. Simulations show that the framework successfully models dynamic shifts while propagating uncertainty. This provides forecasts that are more robust and practical, directly informing public health interventions. Full article
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16 pages, 3581 KB  
Article
Study on the Flower Biology of Camellia luteoflora—A Species with an Extremely Small Population
by Fen Liu, Bangyou Liu, Weicheng Yang, YueHua Song, Sheng Liang, Hangdan Chen, Mengqing Zhou and Gaoyin Wu
Agronomy 2025, 15(9), 2098; https://doi.org/10.3390/agronomy15092098 - 30 Aug 2025
Viewed by 798
Abstract
The aim of this study was to elucidate the reproductive strategy of Camellia luteoflora, an endangered evergreen endemic to karst ecosystems. We observed and recorded its flowering phenology and flower-visiting insects, observed pollen morphology, determined pollen viability, and assessed stigma receptivity. The [...] Read more.
The aim of this study was to elucidate the reproductive strategy of Camellia luteoflora, an endangered evergreen endemic to karst ecosystems. We observed and recorded its flowering phenology and flower-visiting insects, observed pollen morphology, determined pollen viability, and assessed stigma receptivity. The results showed that the flowering period of C. luteoflora started from early September to late December, with the average flowering period of individual flowers being 10–12 days. The pollen morphology of C. luteoflora was subprolate and prolate, with three germinal apertures and the fossulate exine ornamentation. Pollen viability was the highest at the initial opening stage (80.30%). In the process of pollen in vitro, the order of influence on the germination rate and pollen tube length was temperature > sucrose > calcium chloride (CaCl2) > boric acid (H3BO3). The best combination for the germination rate was 24 °C, 75 g/L sucrose, 0.2 g/L CaCl2, 0.15 g/L H3BO3, while that for the pollen tube length was 24 °C, 100 g/L sucrose, 0.2 g/L CaCl2, 0.25 g/L H3BO3. Stigma receptivity was the strongest at the full blooming stage. The pollen/ovule ratio (P/O) was 2240, suggesting a facultative outcrossing breeding system. The outcrossing index (OCI) was 4, suggesting that the exogamous breeding system is the cross-pollination type, partially self-compatible and insect pollinator-dependent. The flower-visiting insects included bees, weevils, and ants. In summary, C. luteoflora exhibits an extended flowering period, with a prolonged overlap of stable pollen viability and stigma receptivity, suggesting a potential strategy to cope with pollination uncertainty. However, field observations recorded only a few species of potential pollinators, while the occurrence frequency of non-pollinating insects was relatively high. It is thus hypothesized that this apparent lack of effective pollinators may act as a potential barrier to successful fertilization and natural regeneration, which might also be one of the factors contributing to its endangered status. Future studies, particularly pollinator exclusion and hand-pollination experiments, are critically needed to verify whether pollinator limitation is indeed a key factor. Full article
(This article belongs to the Section Plant-Crop Biology and Biochemistry)
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31 pages, 12749 KB  
Article
Research on Digital Restoration and Innovative Utilization of Taohuawu Woodblock New Year Prints Based on Edge Detection and Color Clustering
by Yingluo Dai, Fei Ju and Yuhang Wen
Appl. Sci. 2025, 15(16), 9081; https://doi.org/10.3390/app15169081 - 18 Aug 2025
Viewed by 533
Abstract
Taohuawu woodblock New Year prints are one of the most representative traditional multicolor woodblock print forms from the Jiangnan region of China and are recognized as an Intangible Cultural Heritage at the provincial level in Jiangsu. However, the development of mechanized and high-tech [...] Read more.
Taohuawu woodblock New Year prints are one of the most representative traditional multicolor woodblock print forms from the Jiangnan region of China and are recognized as an Intangible Cultural Heritage at the provincial level in Jiangsu. However, the development of mechanized and high-tech production methods, combined with the declining role of traditional festive customs in modern society, has posed significant challenges to the preservation and transmission of this art form. Existing digital preservation efforts mainly focus on two-dimensional scanning and archival storage, largely neglecting the essential processes of color separation and multicolor overprinting. In this study, a digital restoration method is proposed that integrates image processing, color clustering, and edge detection techniques for the efficient reconstruction of the traditional multicolor woodblock overprinting process. The approach applies the K-means++ clustering algorithm to extract the dominant colors and reconstruct individual color layers, in combination with CIELAB color space transformation to enhance color difference perception and improve segmentation accuracy. To address the uncertainty in determining the number of color layers, the elbow method, silhouette coefficient, and Calinski-Harabasz index are employed as clustering evaluation methods to identify the optimal number of clusters. The proposed approach enables the generation of complete, standardized digital color separations, providing a practical pathway for efficient reproduction and intelligent application of TWNY Prints, contributing to the digital preservation and innovative revitalization of intangible cultural heritage. Full article
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24 pages, 4970 KB  
Article
A Perturbation and Symmetry-Based Analysis of Mobile Malware Dynamics in Smartphone Networks
by Mohammad Ababneh, Yousef AbuHour and Ammar Elhassan
Appl. Sci. 2025, 15(14), 8086; https://doi.org/10.3390/app15148086 - 21 Jul 2025
Cited by 1 | Viewed by 407
Abstract
In this paper, we present a mathematical model, Msiqr, to analyze the dynamics of mobile malware propagation in smartphone networks. The model segments the mobile device population into susceptible, exposed, infected, quarantined, and recovered compartments, integrating critical control [...] Read more.
In this paper, we present a mathematical model, Msiqr, to analyze the dynamics of mobile malware propagation in smartphone networks. The model segments the mobile device population into susceptible, exposed, infected, quarantined, and recovered compartments, integrating critical control parameters such as infection and quarantine rates. The analytical results include the derivation of the basic reproduction number, R0, along with equilibrium and stability analyses that provide insights into long-term system behavior. A focused scenario analysis compares the baseline dynamics with a more aggressive malware variant and a more effective quarantine response. The results show that increased infectivity sharply escalates the peak of infection, while enhanced quarantine measures effectively suppress it. This highlights the importance of prompt containment strategies even under more virulent conditions. The sensitivity analysis identifies the infection rate as the most influential parameter driving peak infection, while the quarantine rate exerts the most significant dampening effect. Monte Carlo simulations of parameter uncertainty reveal a consistently high epidemic potential across varied conditions. A parameter sweep across the infection–quarantine space further maps out the conditions under which malware outbreaks can be mitigated or prevented. Overall, the model demonstrates that mobile malware poses sustained epidemic risk under uncertainty, but effective control parameters—particularly quarantine—can drastically alter outbreak trajectories. Full article
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24 pages, 3774 KB  
Article
A Novel Stochastic SVIR Model Capturing Transmission Variability Through Mean-Reverting Processes and Stationary Reproduction Thresholds
by Yassine Sabbar and Saud Fahad Aldosary
Mathematics 2025, 13(13), 2097; https://doi.org/10.3390/math13132097 - 26 Jun 2025
Viewed by 513
Abstract
This study presents a stochastic SVIR epidemic model in which disease transmission rates fluctuate randomly over time, driven by independent, mean-reverting processes with multiplicative noise. These dynamics capture environmental variability and behavioral changes affecting disease spread. We derive analytical expressions for the conditional [...] Read more.
This study presents a stochastic SVIR epidemic model in which disease transmission rates fluctuate randomly over time, driven by independent, mean-reverting processes with multiplicative noise. These dynamics capture environmental variability and behavioral changes affecting disease spread. We derive analytical expressions for the conditional moments of the transmission rates and establish the existence of their stationary distributions under broad conditions. By averaging over these distributions, we define a stationary effective reproduction number that enables a probabilistic classification of outbreak scenarios. Specifically, we estimate the likelihood of disease persistence or extinction based on transmission uncertainty. Sensitivity analyses reveal that the shape and intensity of transmission variability play a decisive role in epidemic outcomes. Monte Carlo simulations validate our theoretical findings, showing strong agreement between empirical distributions and theoretical predictions. Our results underscore how randomness in disease transmission can fundamentally alter epidemic trajectories, offering a robust mathematical framework for risk assessment under uncertainty. Full article
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21 pages, 16156 KB  
Article
Beneficial Analysis of the Effect of Precipitation Enhancement on Highland Barley Production on the Tibetan Plateau Under Different Climate Conditions
by Jiandong Liu, Fei Wang, De Li Liu, Jun Du, Rihan Wu, Han Ding, Fengbin Sun and Qiang Yu
Climate 2025, 13(5), 83; https://doi.org/10.3390/cli13050083 - 26 Apr 2025
Viewed by 613
Abstract
While highland barley on the Tibetan Plateau is adversely affected by water stress during its growth period, precipitation enhancement could potentially mitigate this issue. Accurate assessment of the benefits obtained through precipitation enhancement is crucial for local governments to develop policies for sustainable [...] Read more.
While highland barley on the Tibetan Plateau is adversely affected by water stress during its growth period, precipitation enhancement could potentially mitigate this issue. Accurate assessment of the benefits obtained through precipitation enhancement is crucial for local governments to develop policies for sustainable agriculture. To quantify these benefits, the WOFOST model was employed to evaluate the effects under four different precipitation enhancement scenarios. The model demonstrated strong performance, with a Nash–Sutcliffe Efficiency (NSE) of 0.93 and a root mean square error (RMSE) of 3.66. Using the calibrated WOFOST model, yield increases were simulated under three meteorological drought conditions classified by the Standardized Precipitation Evapotranspiration Index (SPEI). The results showed that yield increases were minimal during years with less rainfall, primarily due to a lower leaf area index under extreme meteorological drought conditions. Additionally, the impact of precipitation enhancement on yield increases was nonlinear. An enhancement of 5% had negligible effects, while enhancements greater than 10% led to significant increases. Specifically, precipitation enhancement during the reproductive stage resulted in regional yield increases of 170.7, 325.5, 465.9, and 580.5 kg/ha for enhancements of 5%, 10%, 15%, and 20%, respectively, surpassing yield increases from enhancements during the vegetative stage. This greater yield increase is attributed to highland barley’s sensitivity to water stress at critical growth stages and the unique climate conditions of the Tibetan Plateau. For Longzi—the largest base for highland barley production, with a planting area of 3440 ha in 2024—a 10% enhancement at the reproductive stage could yield an economic benefit of CNY 9.8 million. Under climate change scenarios, the decreasing trends in highland barley yields could be effectively offset by precipitation enhancement, highlighting the applicability of precipitation enhancement as an effective tool for mitigating climate change in Tibet. Future studies should integrate crop models with weather numerical models to better address uncertainties. Full article
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11 pages, 773 KB  
Article
The New Italian Guidelines for Assisted Reproduction Technologies (ART): Ethical and Medico-Legal Issues
by Costanza Raimondi, Claudia Casella, Emanuele Capasso, Laura L. Campanozzi, Giulia Mercuri, Antonio Oliva, Antonio G. Spagnolo and Pietro Refolo
Healthcare 2025, 13(2), 195; https://doi.org/10.3390/healthcare13020195 - 19 Jan 2025
Viewed by 1754
Abstract
Background: On 20 March 2024, the Italian Minister of Health, in collaboration with the Italian National Institute of Health (Istituto Superiore di Sanità) and the National Health Council (Consiglio Superiore di Sanità), issued updated guidelines for assisted reproduction technologies (ART). They introduced two [...] Read more.
Background: On 20 March 2024, the Italian Minister of Health, in collaboration with the Italian National Institute of Health (Istituto Superiore di Sanità) and the National Health Council (Consiglio Superiore di Sanità), issued updated guidelines for assisted reproduction technologies (ART). They introduced two key changes: (1) permitting post-mortem embryo transfers, allowing a woman to proceed with the procedure after her male partner’s death, and (2) permitting embryo transfer even if the male partner is alive but the relationship has ended. Objectives: This study explores the ethical and medico-legal challenges posed by the updated Italian ART Guidelines, with a specific focus on the complexities of informed consent and the ethical dilemmas introduced by these provisions. Methods: This study employs a comprehensive review of legislation, case law, and a comparative analysis of national and international norms. Primary and secondary sources include laws, regulations, court decisions, and key ethical and medico-legal perspectives. Results were organized into two thematic areas: the medico-legal dimension, focusing on informed consent, and the ethical dimension, addressing post-mortem and ex-partner embryo transfers. Results: The new guidelines exacerbate the already intricate ART landscape in Italy. Post-mortem and post-relationship embryo transfers raise significant ethical concerns and amplify legal uncertainties. Conclusions: These updates highlight the pressing need for legislative reform to address unresolved ethical and legal issues in ART. Full article
(This article belongs to the Special Issue Ethics of Well-Done Work and Proposals for a Better Healthcare System)
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16 pages, 886 KB  
Review
Female Oncofertility and Immune Checkpoint Blockade in Melanoma: Where Are We Today?
by Cha Len Lee, Erika Martinez, Diego Malon Gimenez, Thiago Pimentel Muniz, Marcus Otho Butler and Samuel David Saibil
Cancers 2025, 17(2), 238; https://doi.org/10.3390/cancers17020238 - 13 Jan 2025
Viewed by 1728
Abstract
The incidence of melanoma among young adults has risen, yet mortality has declined annually since the introduction of immune checkpoint inhibitors (ICI). The utilization of peri-operative ICI has significantly altered the treatment landscape in melanoma, with PD-1 inhibitors showing promising efficacy in improving [...] Read more.
The incidence of melanoma among young adults has risen, yet mortality has declined annually since the introduction of immune checkpoint inhibitors (ICI). The utilization of peri-operative ICI has significantly altered the treatment landscape in melanoma, with PD-1 inhibitors showing promising efficacy in improving relapse-free survival rates in high-risk stage II-III disease. With the increasing use of ICI, secondary concerns have emerged regarding the impact of cancer drugs on fertility and reproductive health among women of childbearing potential, especially in early-stage cancer settings. The exclusion of pregnant women from trials contributes to limited human data and clinical uncertainties, such as maternal and fetal toxicities related to ICI exposure during pregnancy, as well as the value of fertility preservation before ICI therapy. Uncertainty persists regarding pregnancy post-adjuvant immunotherapy, given the potential detrimental effects of hormonal and immunological changes during pregnancy on melanoma relapse. There is additional uncertainty about whether pregnancy-associated melanoma (PAM) represents a distinct disease entity that warrants tailored management compared to non-pregnant cases. Our review aims to give an overview of oncofertility practices among female melanoma patients after immunotherapy. We also focus on the literature gap in the published evidence and synthesize summaries regarding ICI toxicities on reproductive health and fetal development, pregnancy planning, and recurrence risks after melanoma treatment. Full article
(This article belongs to the Special Issue Adjuvant Therapy and Neoadjuvant Therapy for Melanoma)
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28 pages, 3510 KB  
Review
Harnessing Ascidians as Model Organisms for Environmental Risk Assessment
by Amalia Rosner and Baruch Rinkevich
Environments 2024, 11(11), 232; https://doi.org/10.3390/environments11110232 - 23 Oct 2024
Cited by 4 | Viewed by 2989
Abstract
Environmental Risk Assessment (ERA) often relies on a restricted set of species as bio-indicators, introducing uncertainty when modeling complex environmental variables. This may lead to oversimplified or erroneous risk assessments. Ascidians, marine filter-feeding sessile chordates, are valuable models for scientific research in various [...] Read more.
Environmental Risk Assessment (ERA) often relies on a restricted set of species as bio-indicators, introducing uncertainty when modeling complex environmental variables. This may lead to oversimplified or erroneous risk assessments. Ascidians, marine filter-feeding sessile chordates, are valuable models for scientific research in various biological fields such as stem cell biology, embryogenesis, regeneration, innate immunity, and developmental biology. Their global distribution, sensitivity to pollutants, high abundance, mass sexual reproduction, and habitation in coastal areas impacted by anthropogenic pollution make them excellent indicators for monitoring marine pollution and global environmental changes, including biological invasions and species diversity diminution cases. Despite their potential as environmental bioindicators, ascidians remain underutilized in ERAs (≤0.13% of ERA studies), particularly in the field of chemical pollution impact assessment, primarily due to a lack of standardization. This underrepresentation poses a challenge for accurate modeling, especially in models relying on a broad range of species (e.g., Species Sensitivity Distributions). Given these constraints, expanding the use of ascidians in ERAs could improve the comprehension and precision of environmental changes and their assessments. This underscores the necessity for future research to establish standardized testing protocols and choose the most suitable ascidian species for inclusion in ERAs. Full article
(This article belongs to the Special Issue Environmental Risk Assessment of Aquatic Ecosystem)
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45 pages, 1174 KB  
Review
Proton Radiation Therapy: A Systematic Review of Treatment-Related Side Effects and Toxicities
by Peter P. Salem, Perla Chami, Remy Daou, Joseph Hajj, Haibo Lin, Arpit M. Chhabra, Charles B. Simone, Nancy Y. Lee and Carla Hajj
Int. J. Mol. Sci. 2024, 25(20), 10969; https://doi.org/10.3390/ijms252010969 - 11 Oct 2024
Cited by 11 | Viewed by 7581
Abstract
Cancer is the second leading cause of death worldwide. Around half of all cancer patients undergo some type of radiation therapy throughout the course of their treatment. Photon radiation remains (RT) the most widely utilized modality of radiotherapy despite recent advancements in proton [...] Read more.
Cancer is the second leading cause of death worldwide. Around half of all cancer patients undergo some type of radiation therapy throughout the course of their treatment. Photon radiation remains (RT) the most widely utilized modality of radiotherapy despite recent advancements in proton radiation therapy (PBT). PBT makes use of the particle’s biological property known as the Bragg peak to better spare healthy tissue from radiation damage, with data to support that this treatment modality is less toxic than photon RT. Hence, proton radiation dosimetry looks better compared to photon dosimetry; however, due to proton-specific uncertainties, unexpected acute, subacute, and long-term toxicities can be encountered. Reported neurotoxicity resulting from proton radiation treatments include radiation necrosis, moyamoya syndrome, neurosensory toxicities, brain edema, neuromuscular toxicities, and neurocognitive toxicities. Pulmonary toxicities include pneumonitis and fibrosis, pleural effusions, and bronchial toxicities. Pericarditis, pericardial effusions, and atrial fibrillations are among the cardiac toxicities related to proton therapy. Gastrointestinal and hematological toxicities are also found in the literature. Genitourinary toxicities include urinary and reproductive-related toxicities. Osteological, oral, endocrine, and skin toxicities have also been reported. The side effects will be comparable to the ones following photon RT, nonetheless at an expected lower incidence. The toxicities collected mainly from case reports and clinical trials are described based on the organs affected and functions altered. Full article
(This article belongs to the Special Issue New Insights into Radiation Oncology)
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14 pages, 1629 KB  
Article
Per- and Polyfluoroalkyl Substances (PFAS) Accumulation, Reproductive Impairment, and Associations with Nestling Body Condition in Great (Parus major)- and Blue Tits (Cyanistes caeruleus) Living near a Hotspot in Belgium
by Thimo Groffen, Jodie Buytaert, Els Prinsen, Lieven Bervoets and Marcel Eens
Toxics 2024, 12(9), 636; https://doi.org/10.3390/toxics12090636 - 29 Aug 2024
Cited by 3 | Viewed by 2137
Abstract
Due to the limited number of field studies investigating associations between environmentally relevant per- and polyfluoroalkyl substances (PFAS) mixtures and reproductive impairment, there is uncertainty as to whether birds are affected by PFAS pollution, whether species differ in sensitivity to PFAS, and whether [...] Read more.
Due to the limited number of field studies investigating associations between environmentally relevant per- and polyfluoroalkyl substances (PFAS) mixtures and reproductive impairment, there is uncertainty as to whether birds are affected by PFAS pollution, whether species differ in sensitivity to PFAS, and whether the observed reproductive impairment is caused by PFAS or rather due to other potential confounding variables. Therefore, we investigated PFAS concentrations in eggs and blood plasma of great tit (Parus major) and blue tit (Cyanistes caeruleus) nestlings near a PFAS hotspot in Belgium, reproductive impairment, and associations between the accumulated levels and nestling body condition. In total, 29 eggs and 22 blood plasma samples of great tit clutches, and 10 egg and 10 blood plasma samples of blue tit clutches, were collected. Despite more types of PFAS being detected in eggs compared to plasma, only minor differences in profiles were observed between species. On the other hand, tissue-specific differences were more pronounced and likely reflect a combination of maternal transfer and dietary exposure post-hatching. Despite the high concentrations detected in both species, limited reproductive impairment was observed. Our results support previous findings that great tits and blue tits may not be very susceptible to PFAS pollution and provide evidence that other factors, including ecological stoichiometry, may be more important in explaining inter-species variation in PFAS accumulation and reproductive impairment. Full article
(This article belongs to the Section Ecotoxicology)
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15 pages, 549 KB  
Article
Dynamics of Activation and Regulation of the Immune Response to Attack by Viral Pathogens Using Mathematical Modeling
by Ledyz Cuesta-Herrera, Luis Pastenes, Ariel D. Arencibia, Fernando Córdova-Lepe and Cristhian Montoya
Mathematics 2024, 12(17), 2681; https://doi.org/10.3390/math12172681 - 28 Aug 2024
Cited by 2 | Viewed by 1873
Abstract
In this paper, a mathematical model is developed to simulate the activation of regulatory T lymphocytes dynamics. The model considers the adaptive immune response and consists of epithelial cells, infected cells, free virus particles, helper and cytotoxic T lymphocytes, B lymphocytes, and regulatory [...] Read more.
In this paper, a mathematical model is developed to simulate the activation of regulatory T lymphocytes dynamics. The model considers the adaptive immune response and consists of epithelial cells, infected cells, free virus particles, helper and cytotoxic T lymphocytes, B lymphocytes, and regulatory T lymphocytes. A mathematical analysis was carried out to discuss the conditions of existence and stability of equilibrium solutions in terms of the basic reproductive number. In addition, the definitions and properties necessary to preserve the positivity and stability of the model are shown. The precision of these mathematical models can be affected by numerous sources of uncertainty, partly due to the balance between the complexity of the model and its predictive capacity to depict the biological process accurately. Nevertheless, these models can provide remarkably perspectives on the dynamics of infection and assist in identification specific immunological traits that improve our comprehension of immune mechanisms. The theoretical results are validated by numerical simulations using data reported in the literature. The construction, analysis, and simulation of the developed models demonstrate that the increased induced regulatory T lymphocytes effectively suppress the inflammatory response in contrast to similar cells at lower contents, playing a key role in maintaining self-tolerance and immune homeostasis. Full article
(This article belongs to the Special Issue Applied Mathematical Modelling and Dynamical Systems, 2nd Edition)
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15 pages, 1747 KB  
Article
Classifying Cockroaches According to Forewings: Pitfalls and Implications for Fossil Systematics
by Xin-Ran Li
Taxonomy 2024, 4(3), 618-632; https://doi.org/10.3390/taxonomy4030031 - 15 Aug 2024
Cited by 3 | Viewed by 2900
Abstract
A reliable character system is crucial to taxonomy and systematics, and it promises valid downstream inferences, e.g., estimates of diversity and disparity, reconstruction of evolutionary history, and even stratigraphic correlations. Modern taxonomy and systematics of extant cockroaches requires an integrative study involving multiple [...] Read more.
A reliable character system is crucial to taxonomy and systematics, and it promises valid downstream inferences, e.g., estimates of diversity and disparity, reconstruction of evolutionary history, and even stratigraphic correlations. Modern taxonomy and systematics of extant cockroaches requires an integrative study involving multiple lines of evidence with emphasis on genital and reproductive characteristics and molecular data. In contrast, many fossil cockroach taxa published recently are based solely on forewings. Many studies have shown that forewing-based taxa are questionable. In order to find out how much of the phylogenetic signal we could ascertain from venational similarity, and how confident we could be, this study used forewing characters to reconstruct phylogenies of the genera of well-recognized family-group taxa. The intuitively reconstructed phylogeny of 75 extant genera failed to recover those taxa or their relationships. Parsimony analyses of various datasets all yielded strong polyphyly and chaotic relationships. In conclusion, the forewing of cockroaches is not a universally competent character system. The underlying causes are the complicated nature of veins and the limitations of current analytical techniques. The uncertainty in forewing-based taxonomy and systematics has been underestimated in the literature. Forewing-based fossil taxa warrant re-evaluation; some of them are herein deemed nomina dubia in their current state. Full article
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14 pages, 1627 KB  
Article
Species Richness Net Primary Productivity and the Water Balance Problem
by Allen G. Hunt, Muhammad Sahimi and Erica A. Newman
Entropy 2024, 26(8), 641; https://doi.org/10.3390/e26080641 - 28 Jul 2024
Cited by 3 | Viewed by 2513
Abstract
Species energy theory suggests that, because of limitations on reproduction efficiency, a minimum density of plant individuals per viable species exists and that this minimum correlates the total number of plant individuals N with the number of species S. The simplest assumption [...] Read more.
Species energy theory suggests that, because of limitations on reproduction efficiency, a minimum density of plant individuals per viable species exists and that this minimum correlates the total number of plant individuals N with the number of species S. The simplest assumption is that the mean energy input per individual plant is independent of the number of individuals, making N, and thus S as well, proportional to the total energy input into the system. The primary energy input to a plant-dominated ecosystem is estimated as its Net Primary Productivity (NPP). Thus, species energy theory draws a direct correspondence from NPP to S. Although investigations have verified a strong connection between S and NPP, strong influences of other factors, such as topography, ecological processes such as competition, and historical contingencies, are also at play. The lack of a simple model of NPP expressed in terms of the principal climate variables, precipitation P, and potential evapotranspiration, PET, introduces unnecessary uncertainty to the understanding of species richness across scales. Recent research combines percolation theory with the principle of ecological optimality to derive an expression for NPP(P, PET). Consistent with assuming S is proportional to NPP, we show here that the new expression for NPP(P, PET) predicts the number of plant species S in an ecosystem as a function of P and PET. As already demonstrated elsewhere, the results are consistent with some additional variation due to non-climatic inputs. We suggest that it may be easier to infer specific deviations from species energy predictions with increased accuracy and generality of the prediction of NPP(P, PET). Full article
(This article belongs to the Special Issue 180th Anniversary of Ludwig Boltzmann)
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