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Keywords = size exclusion chromatography

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20 pages, 2635 KB  
Article
Polyethylene Terephthalate Glycolysis: Kinetic Modeling and Validation
by Maja Gabrič, Žan Lavrič, Martin Schwiderski, Laureline Marc, Erik Temmel, Miha Grilc and Blaž Likozar
Polymers 2025, 17(16), 2246; https://doi.org/10.3390/polym17162246 - 20 Aug 2025
Viewed by 337
Abstract
In this study, a comprehensive investigation of PET glycolysis has been performed. The research included the development of analytical techniques, experiments with different reactor systems, and the development of mathematical models to understand the kinetics of the process. Quantitative HPLC analysis was adopted [...] Read more.
In this study, a comprehensive investigation of PET glycolysis has been performed. The research included the development of analytical techniques, experiments with different reactor systems, and the development of mathematical models to understand the kinetics of the process. Quantitative HPLC analysis was adopted and optimized for the detection of BHET, while the size-exclusion chromatography method was developed to determine the molecular weight distribution of solid PET residues. Over 33 experiments were performed with magnetically coupled shaft-stirred Amar reactors, resulting in more than 300 experimentally determined BHET concentration points at various reaction times, temperatures, catalyst concentrations, and ethylene glycol-to-PET ratios. Afterwards, a kinetic model was developed to describe the observed phenomena with a validation step. Full article
(This article belongs to the Section Polymer Physics and Theory)
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20 pages, 2452 KB  
Article
The Importance of Solution Studies for the Structural Characterization of the Enterovirus 5’ Cloverleaf
by Morgan G. Daniels, Meagan E. Werner, Xiaobing Zuo and Steven M. Pascal
Viruses 2025, 17(8), 1127; https://doi.org/10.3390/v17081127 - 16 Aug 2025
Viewed by 373
Abstract
Enteroviruses initiate genomic replication via a highly conserved mechanism that is controlled by an RNA platform, also known as the 5’ cloverleaf (5’CL). Here, we present a biophysical analysis of the 5’CL conformation of three enterovirus serotypes under various ionic conditions, utilizing CD [...] Read more.
Enteroviruses initiate genomic replication via a highly conserved mechanism that is controlled by an RNA platform, also known as the 5’ cloverleaf (5’CL). Here, we present a biophysical analysis of the 5’CL conformation of three enterovirus serotypes under various ionic conditions, utilizing CD spectroscopy, size-exclusion chromatography, and small-angle X-ray scattering. In general, a tendency toward a smaller monomeric hydrodynamic radius in the presence of salts was observed, but the exact structural signature of each 5’CL varied depending upon the serotype. Rhinovirus B14 (RVB14) exhibited at least two monomeric conformations and a low propensity for dimerization, while poliovirus 1 (PV1) showed a high propensity for dimerization, which was enhanced by the presence of salts. Enterovirus D70 was observed to be somewhat intermediate, with primarily a monomeric structure, but possessing some potential for dimerization. The equilibrium between the two monomeric and the dimeric conformations is also discussed. These results indicate that the 5’CL conformation may be more complex than the current literature suggests, thus underscoring the need for a combined crystal and solution approach for the accurate representation of the 5’CL conformation, and the conformation of other RNA structural elements, under native conditions. Full article
(This article belongs to the Special Issue An Update on Enterovirus Research, 2nd Edition)
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23 pages, 2025 KB  
Article
Chemical Exploration of Polysaccharides, Fatty Acids, and Antioxidants as Functional Ingredients from Colombian Macroalgae Acanthophora spicifera, Sargassum ramifolium, and Sargassum fluitans
by Jhonny Colorado-Ríos, Diana C. Restrepo-Espinosa, Yuli Restrepo-Moná, Juan David Monsalve, Diana M. Márquez-Fernández, Leonardo Castellanos and Alejandro Martínez-Martínez
Molecules 2025, 30(16), 3333; https://doi.org/10.3390/molecules30163333 - 10 Aug 2025
Viewed by 452
Abstract
Macroalgae are valuable natural sources for bioprospection and the development of raw materials applicable to the nutrition, health, and agriculture industries. To build a basis for the sustainable use of marine organisms from the Colombian Caribbean, a preliminary study was conducted focusing on [...] Read more.
Macroalgae are valuable natural sources for bioprospection and the development of raw materials applicable to the nutrition, health, and agriculture industries. To build a basis for the sustainable use of marine organisms from the Colombian Caribbean, a preliminary study was conducted focusing on known functional compounds in two genera of macroalgae, including the species Acanthophora spicifera (Rhodophyta), Sargassum ramifolium, and Sargassum fluitans (Ochrophyta). This study included the extraction and identification of polysaccharides using ultrafiltration, nuclear magnetic resonance (1H-NMR), Fourier-transform infrared spectroscopy (FT-IR), and size exclusion chromatography (SEC); fatty acids by gas chromatographic (GC) profiling; and phenolic composition and antioxidant activity by complementary semi-quantitative methods (ABTS, DPPH, FRAP, and ORAC assays). Carrageenan-type polysaccharides were detected in A. spicifera, while alginate and fucoidan types were found in S. ramifolium and S. fluitans; palmitic acid was the predominant fatty acid in A. spicifera and S. ramifolium, but it was not detected in S. fluitans. S. ramifolium showed the highest ABTS, DPPH, and ORAC activities and phenolic compounds, while S. fluitans exhibited the highest FRAP activity. This study contributes to the chemical knowledge on Colombian macroalgae to establish potential applications in various fields, including biomedicine, cosmetics, functional foods, and nutraceutical ingredients. Full article
(This article belongs to the Special Issue Bioactive Compounds from Functional Foods, 2nd Edition)
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15 pages, 1544 KB  
Article
Optimizing Scaled up Production and Purification of Recombinant Hydrophobin HFBI in Pichia pastoris
by Mason A. Kinkeade, Aurora L. Pagan and Bryan W. Berger
Microorganisms 2025, 13(8), 1845; https://doi.org/10.3390/microorganisms13081845 - 7 Aug 2025
Viewed by 393
Abstract
Hydrophobins are small, surface-active protein biosurfactants secreted by filamentous fungi with potential applications in industries such as pharmaceuticals, sanitation, and biomaterials. Additionally, hydrophobins are known to stabilize enzymatic processing of biomass for improved catalytic efficiency. In this study, Pichia pastoris was used to [...] Read more.
Hydrophobins are small, surface-active protein biosurfactants secreted by filamentous fungi with potential applications in industries such as pharmaceuticals, sanitation, and biomaterials. Additionally, hydrophobins are known to stabilize enzymatic processing of biomass for improved catalytic efficiency. In this study, Pichia pastoris was used to recombinantly express hydrophobin HFBI from Trichoderma reesei, a well-characterized fungal system used industrially for bioethanol production. Iterative optimization was performed on both the induction and purification of HFBI, ultimately producing yields of 86.6 mg/L HFBI and elution concentrations of 48 μM HFBI determined pure by SDS-PAGE, over a five-day methanol-fed batch shake flask induction regiment followed by a single unit operation multimodal cation exchange purification. This final purified material represents an improvement over prior approaches to enable a wider range of potential applications for biosurfactants. Full article
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20 pages, 3157 KB  
Article
Enhancement of Foaming Performance of Oat Globulin by Limited Enzymatic Hydrolysis: A Study from the Viewpoint of the Structural and Functional Properties
by Yahui Zhu, Junlong Zhang, Xuedong Gu, Pengjie Wang, Yang Liu, Yingze Jiao, Lin Yang and Han Chen
Gels 2025, 11(8), 615; https://doi.org/10.3390/gels11080615 - 6 Aug 2025
Viewed by 328
Abstract
This study identified the optimal enzymatic treatment for improving the foaming characteristics of oat globulin, and alkaline protease was found to be the most effective enzyme. The impact of alkaline protease on the foaming properties and structural changes in oat globulin was explored. [...] Read more.
This study identified the optimal enzymatic treatment for improving the foaming characteristics of oat globulin, and alkaline protease was found to be the most effective enzyme. The impact of alkaline protease on the foaming properties and structural changes in oat globulin was explored. The results show that the foaming capacity of oat globulin hydrolysates is negatively correlated with surface hydrophobicity and positively correlated with the degree of hydrolysis. The results of circular dichroism (CD) and size-exclusion chromatography (SEC) indicate that hydrolysis generated smaller, disordered peptides. Under equilibrium conditions at a 2% concentration, a reduction of 1.62 mN/m in surface tension and an increase of 3.82 μm in foam film thickness were observed. These peptides reduce surface tension between air and water, forming larger, thicker, and more stable foams. Compared to untreated oat globulin, the foaming capacity of hydrolyzed ones increased by 87.17%. Under comparable conditions, these findings demonstrate that limited hydrolyzed oat globulin exhibits potential as an effective plant-based foaming agent up to a degree of hydrolysis of 15.06%. Full article
(This article belongs to the Special Issue Gels for Plant-Based Food Applications (2nd Edition))
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15 pages, 3565 KB  
Article
Controlled PolyDMAEMA Functionalization of Titanium Surfaces via Graft-To and Graft-From Strategies
by Chiara Frezza, Susanna Romano, Daniele Rocco, Giancarlo Masci, Giovanni Sotgiu, Monica Orsini and Serena De Santis
Micromachines 2025, 16(8), 899; https://doi.org/10.3390/mi16080899 - 31 Jul 2025
Viewed by 298
Abstract
Titanium is widely recognized as an interesting material for electrodes due to its excellent corrosion resistance, mechanical strength, and biocompatibility. However, further functionalization is often necessary to impart advanced interfacial properties, such as selective ion transport or stimuli responsiveness. In this context, the [...] Read more.
Titanium is widely recognized as an interesting material for electrodes due to its excellent corrosion resistance, mechanical strength, and biocompatibility. However, further functionalization is often necessary to impart advanced interfacial properties, such as selective ion transport or stimuli responsiveness. In this context, the integration of smart polymers, such as poly(2-(dimethylamino)ethyl methacrylate) (PDMAEMA)—noted for its dual pH- and thermo-responsive behavior—has emerged as a promising approach to tailor surface properties for next-generation devices. This work compares two covalent immobilization strategies for PDMAEMA on titanium: the “graft-to” method, involving the attachment of pre-synthesized polymer chains, and the “graft-from” method, based on surface-initiated polymerization. The resulting materials were characterized with size exclusion chromatography (SEC) for molecular weight, Fourier-transform infrared spectroscopy (FTIR) for chemical structure, scanning electron microscopy (SEM) for surface morphology, and contact angle measurements for wettability. Electrochemical impedance spectroscopy and polarization studies were used to assess electrochemical performance. Both strategies yielded uniform and stable coatings, with the mode of grafting influencing both surface morphology and functional stability. These findings provide valuable insights into the development of adaptive, stimuli-responsive titanium-based interfaces in advanced electrochemical systems. Full article
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11 pages, 2590 KB  
Article
Identification and Quantification of Pteridines in the Wild Type and the ambar Mutant of Orius laevigatus (Hemiptera: Anthocoridae)
by Yolanda Bel, Amador Rodríguez-Gómez, Pablo Bielza and Juan Ferré
Insects 2025, 16(8), 756; https://doi.org/10.3390/insects16080756 - 23 Jul 2025
Viewed by 531
Abstract
Nymphs of the ambar mutant of Orius laevigatus (Fieber) are orange-colored instead of the yellowish color of the wild-type individuals. Since there were no previous studies of the pigments of this species, we searched for differences in pigments of the pteridine family between [...] Read more.
Nymphs of the ambar mutant of Orius laevigatus (Fieber) are orange-colored instead of the yellowish color of the wild-type individuals. Since there were no previous studies of the pigments of this species, we searched for differences in pigments of the pteridine family between both strains. Fluorescent compounds from nymph extracts were separated by cellulose thin-layer chromatography (TLC) and by size exclusion chromatography, followed by LC/MS/MS. The present study has allowed the identification for the first time in O. laevigatus of erythropterin, leucopterin, 7-methylxanthopterin, xanthopterin, isoxanthopterin, pterin, and biopterin. The quantification was performed by fluorometry after elution of the pteridines previously separated by TLC. The results showed that the orange color in the ambar nymphs was due to the accumulation of the orange pigment erythropterin. Additionally, mutant nymphs exhibited significantly elevated levels of pterin and reduced levels of leucopterin. The possibility that these differences were due to differences in xanthine dehydrogenase (XDH) activity was tested; the results indicated that XDH deficiency is unlikely to be responsible for the mutant phenotype. Considering that the ambar mutation is recessive, the mutant phenotype should, most likely, be due to a disruption in downstream metabolic steps involved in erythropterin processing. Full article
(This article belongs to the Section Other Arthropods and General Topics)
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9 pages, 2281 KB  
Communication
Characterization of Small Extracellular Vesicles Isolated from Aurelia aurita
by Aldona Dobrzycka-Krahel, Aleksandra Steć, Grzegorz S. Czyrski, Andrea Heinz and Szymon Dziomba
Biology 2025, 14(8), 922; https://doi.org/10.3390/biology14080922 - 23 Jul 2025
Viewed by 316
Abstract
A moon jellyfish (Aurelia aurita) is a representative of the phylum Cnidaria, commonly found in the northern seas of the globe. The regenerative abilities of cnidarians have recently been associated with extracellular vesicles (EVs) secreted by these organisms. In this study, [...] Read more.
A moon jellyfish (Aurelia aurita) is a representative of the phylum Cnidaria, commonly found in the northern seas of the globe. The regenerative abilities of cnidarians have recently been associated with extracellular vesicles (EVs) secreted by these organisms. In this study, a method for the isolation of EVs from the oral arms of A. aurita is presented. The methodology includes differential centrifugation, size-exclusion chromatography, and ultrafiltration. The isolates were characterized with tunable resistive pulse sensing, cryogenic transmission electron microscopy, capillary electrophoresis (CE), and electrophoretic light scattering (ELS). Small (<150 nm in diameter) EVs were abundant in the isolates. The EVs were found to carry nucleic acids, indicating their role in signaling. Additionally, the difference in zeta potential values measured with ELS and CE indicates high glycation in the vesicles analyzed. Although the method developed was effective in isolating EVs from small sample volumes (0.5 mL), the EV yield was insufficient for omics analysis. Thus, the scaling up of the isolation process is required for comprehensive biochemical analysis and biological activity assessment in A. aurita-derived EVs. Full article
(This article belongs to the Section Marine Biology)
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21 pages, 4829 KB  
Article
Temporal and Severity-Dependent Alterations in Plasma Extracellular Vesicle Profiles Following Spinal Cord Injury
by Jamie Cooper, Scott Tait Airey, Eric Patino, Theo Andriot, Mousumi Ghosh and Damien D. Pearse
Cells 2025, 14(14), 1065; https://doi.org/10.3390/cells14141065 - 11 Jul 2025
Viewed by 573
Abstract
Spinal cord injury (SCI) triggers both local and systemic pathological responses that evolve over time and differ with injury severity. Small extracellular vesicles (sEVs), known mediators of intercellular communication, may serve as biomarkers reflecting these complex dynamics. In this study, we investigated whether [...] Read more.
Spinal cord injury (SCI) triggers both local and systemic pathological responses that evolve over time and differ with injury severity. Small extracellular vesicles (sEVs), known mediators of intercellular communication, may serve as biomarkers reflecting these complex dynamics. In this study, we investigated whether SCI severity modulates the composition and abundance of circulating plasma-derived sEVs across subacute and chronic phases. Using a graded thoracic contusion model in mice, plasma was collected at defined timepoints post-injury. sEVs were isolated via size-exclusion chromatography and characterized using nanoparticle tracking analysis (NTA), transmission electron microscopy (TEM), and MACSPlex surface marker profiling. We observed an SCI-dependent increase in sEVs during the subacute (7 days) phase, most notably in moderate injuries (50 kdyne), with overall vesicle counts lower chronically (3 months). CD9 emerged as the predominant tetraspanin sEV marker, while CD63 and CD81 were generally present at low levels across all injury severities and timepoints. Surface sEV analysis revealed dynamic regulation of CD41+, CD44+, and CD61+ in the CD9+ sEV subset, suggesting persistent systemic signaling activity. These markers, traditionally associated with platelet function, may also reflect immune or reparative responses following SCI. Our findings highlight the evolving nature of sEV profiles after SCI and support their potential as non-invasive biomarkers for monitoring injury progression. Full article
(This article belongs to the Special Issue Extracellular Vesicles as Biomarkers for Human Disease)
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18 pages, 3303 KB  
Article
Crucian Carp-Derived ACE-Inhibitory Peptides with In Vivo Antihypertensive Activity: Insights into Bioactivity, Mechanism, and Safety
by Runxi Han, Jingshan Tian, Yingge Han, Guoxiang Wang, Guanghong Zhou, Chen Dai and Chong Wang
Molecules 2025, 30(13), 2812; https://doi.org/10.3390/molecules30132812 - 30 Jun 2025
Cited by 1 | Viewed by 468
Abstract
This study explores the identification, characterization, and biological evaluation of angiotensin I-converting enzyme (ACE)-inhibitory peptides derived from enzymatic hydrolysates of crucian carp swim bladders. Following sequential purification by size-exclusion and reversed-phase chromatography, two bioactive peptides—Hyp-Gly-Ala-Arg (Hyp-GAR) and Gly-Ala-Hyp-Gly-Ala-Arg (GA-Hyp-GAR)—were identified using ultra-high-performance liquid [...] Read more.
This study explores the identification, characterization, and biological evaluation of angiotensin I-converting enzyme (ACE)-inhibitory peptides derived from enzymatic hydrolysates of crucian carp swim bladders. Following sequential purification by size-exclusion and reversed-phase chromatography, two bioactive peptides—Hyp-Gly-Ala-Arg (Hyp-GAR) and Gly-Ala-Hyp-Gly-Ala-Arg (GA-Hyp-GAR)—were identified using ultra-high-performance liquid chromatography coupled with linear ion trap–Orbitrap tandem mass spectrometry. The synthetic peptides demonstrated potent ACE-inhibitory activity in vitro, with IC₅₀ values of 12.2 μM (Hyp-GAR) and 4.00 μM (GA-Hyp-GAR). Molecular docking and enzyme kinetics confirmed competitive inhibition through key interactions with ACE active site residues and zinc coordination. In vivo antihypertensive activity was evaluated in spontaneously hypertensive rats, revealing that GA-Hyp-GAR significantly reduced systolic blood pressure in a dose-dependent manner. At a dose of 36 mg/kg, GA-Hyp-GAR reduced systolic blood pressure by 60 mmHg—an effect comparable in magnitude and timing to that of captopril. Mechanistically, GA-Hyp-GAR modulated levels of angiotensin II, bradykinin, endothelial nitric oxide synthase, and nitric oxide. A 90-day subchronic oral toxicity study in mice indicated no significant hematological, biochemical, or histopathological alterations, supporting the peptide’s safety profile. These findings suggest that GA-Hyp-GAR is a promising natural ACE inhibitor with potential application in functional foods or as a nutraceutical for hypertension management. Full article
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13 pages, 2049 KB  
Article
Virus-like Particle Vaccine for Feline Panleukopenia: Immunogenicity and Protective Efficacy in Cats
by Tongyan Wang, Hongchao Wu, Yanwei Wang, Yang Guan, Yujiao Cao, Lulu Wang, Mengyue Wang, Feifei Tan, Wenqiang Pang and Kegong Tian
Vaccines 2025, 13(7), 684; https://doi.org/10.3390/vaccines13070684 - 25 Jun 2025
Viewed by 2964
Abstract
Background/Objectives: Feline panleukopenia, caused by FPV, is a highly contagious disease in cats. Current vaccines face challenges including complex production, high cost, and safety risks. Developing safer, more efficient alternatives is crucial. This study aimed to produce FPV virus-like particles (VLPs) using a [...] Read more.
Background/Objectives: Feline panleukopenia, caused by FPV, is a highly contagious disease in cats. Current vaccines face challenges including complex production, high cost, and safety risks. Developing safer, more efficient alternatives is crucial. This study aimed to produce FPV virus-like particles (VLPs) using a recombinant baculovirus system expressing the VP2 gene and evaluate their immunogenicity and protective efficacy in cats. Methods: Sf9 insect cells were infected with recombinant baculovirus to express VP2 protein. The VP2 protein was purified using ultrafiltration and size-exclusion chromatography (SEC). Dynamic light scattering (DLS) and transmission electron microscopy (TEM) confirmed the assembly of VLPs. Twenty healthy cats were randomly divided into four groups; three groups received different doses (5 μg, 15 μg, and 45 μg) of FPV VLP vaccine, while the fourth group served as the control group immunized with PBS. Blood samples were collected on day 21 to measure hemagglutination inhibition (HI) and virus-neutralizing (VN) antibody responses. Cats in the 15 μg dose group were challenged with virulent FPV strain 708 on day 21, and clinical signs and white blood cell counts were monitored for 10 days. Results: Immunized cats exhibited significantly higher HI and VN antibody titers compared to controls. After challenge, vaccinated cats showed no clinical signs of disease, and their white blood cell counts remained stable. In contrast, control cats developed severe symptoms and experienced significant leukopenia. Conclusions: The FPV VLP vaccine generated in this study are highly immunogenic and provide effective protection against virulent FPV challenge, demonstrating their potential as a safer vaccine candidate for feline panleukopenia. Full article
(This article belongs to the Section Veterinary Vaccines)
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19 pages, 3764 KB  
Article
Isolation and Characterization of Tissue-Derived Extracellular Vesicles from Mouse Lymph Nodes
by Bernadett R. Bodnár, Sayam Ghosal, Brachyahu M. Kestecher, Panna Királyhidi, András Försönits, Nóra Fekete, Edina Bugyik, Zsolt I. Komlósi, Éva Pállinger, György Nagy, Edit I. Buzás and Xabier Osteikoetxea
Int. J. Mol. Sci. 2025, 26(13), 6092; https://doi.org/10.3390/ijms26136092 - 25 Jun 2025
Viewed by 2196
Abstract
Extracellular vesicles (EVs) are lipid membrane-enclosed particles released by all cells and can be isolated from various sources, even from solid tissues. This study focuses on isolating and characterizing EVs from mouse lymph nodes (LNs). Male C57BL/6 mice were injected with complete Freund’s [...] Read more.
Extracellular vesicles (EVs) are lipid membrane-enclosed particles released by all cells and can be isolated from various sources, even from solid tissues. This study focuses on isolating and characterizing EVs from mouse lymph nodes (LNs). Male C57BL/6 mice were injected with complete Freund’s adjuvant, with or without ovalbumin. Inguinal and popliteal LNs were incised 9 days after immunization, and EV isolation was carried out using a combination of differential centrifugation and size-exclusion chromatography. The characteristic morphology of small and large EVs was confirmed by transmission electron microscopy. Particle size distribution and concentration were determined by nanoparticle tracking analysis, while protein and lipid contents were measured by bicinchoninic acid assay, and sulfo-phospho-vanillin assays, respectively, to calculate the protein-to-lipid ratio. Immune and EV markers were analyzed by using flow cytometry and Western blot assay, revealing significant changes between immunized mice compared to controls. This study establishes a novel protocol for isolating and characterizing EVs from LNs and highlights the impact of immunization on EV properties, offering insights into their roles in immune processes. Full article
(This article belongs to the Special Issue Molecular Mechanism of Extracellular Vesicles in Human Diseases)
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16 pages, 3738 KB  
Article
Effect of Mutations in the C-Terminal 22–24 Domains of Filamin C Associated with Cardio- and Myopathies on Its Interaction with Small Heat Shock Protein HspB7
by Lydia K. Muranova, Varvara M. Vostrikova and Nikolai B. Gusev
Int. J. Mol. Sci. 2025, 26(12), 5512; https://doi.org/10.3390/ijms26125512 - 9 Jun 2025
Viewed by 445
Abstract
We investigated the interaction of HspB7 and its α-crystallin domain with the wild-type (WT) C-terminal fragment of human filamin C (FLNC), containing immunoglobulin-like domains 22–24 and its three mutants associated with cardio- and myopathies. The physicochemical properties of the WT FLNC fragment and [...] Read more.
We investigated the interaction of HspB7 and its α-crystallin domain with the wild-type (WT) C-terminal fragment of human filamin C (FLNC), containing immunoglobulin-like domains 22–24 and its three mutants associated with cardio- and myopathies. The physicochemical properties of the WT FLNC fragment and its three mutants, p.Glu2472_Asn2473delinsAsp (EN/D) located in the 22nd domain, p.P2643_L2645del (ΔPGL), and p.W2710X (Wmut) both located in the 24th immunoglobulin-like domain were analyzed. Although all FLNC fragments had similar secondary structures, WT FLNC and its EN/D and ΔPGL mutants formed dimers, whereas Wmut formed either monomers or aggregates. The surface hydrophobicity of EN/D, ΔPGL, and especially Wmut mutants was larger than that of the WT fragment. Size exclusion chromatography, native gel electrophoresis, and chemical crosslinking indicated that the efficiency of interaction with HspB7 or its α-crystallin domain decreased in the order WT~EN/D > ΔPGL. Wmut was unable to interact with either HspB7 or its α-crystallin domain. Modeling via Alphafold 3 indicated that EN/D mutation affected the orientation of two loops connecting β-strands in the 22nd domain, while the ΔPGL and Wmut mutations exposed a hydrophobic groove in the 24th domain thereby reducing their interaction with HspB7. These findings reveal the molecular mechanisms underlying filaminopathies associated with three mutations in the C-terminal region of filamin C. Full article
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12 pages, 1401 KB  
Article
Isolation and Preliminary X-Ray Crystallographic Characterisation of the Periplasmic Ligand-Binding Domain of the Chemoreceptor Tlp3 from Campylobacter hepaticus
by Diana Kovaleva, Yue Xin, Mohammad F. Khan, Yu H. Chin and Anna Roujeinikova
Crystals 2025, 15(6), 542; https://doi.org/10.3390/cryst15060542 - 6 Jun 2025
Viewed by 656
Abstract
The Campylobacter genus includes many pathogenic species, with Campylobacter hepaticus primarily implicated in spotty liver disease in poultry. Chemotaxis is one of the well-established mechanisms of pathogenesis of Campylobacter. The chemoreceptor Tlp3, previously studied in C. jejuni, mediates responses to diverse [...] Read more.
The Campylobacter genus includes many pathogenic species, with Campylobacter hepaticus primarily implicated in spotty liver disease in poultry. Chemotaxis is one of the well-established mechanisms of pathogenesis of Campylobacter. The chemoreceptor Tlp3, previously studied in C. jejuni, mediates responses to diverse ligands. Differences between the ligand-binding pockets of Tlp3s in C. hepaticus and C. jejuni may influence ligand specificity and niche adaptation. Here, we report a method for production of the ligand-binding domain of C. hepaticus Tlp3 (Ch Tlp3-LBD) in Escherichia coli inclusion bodies that yields crystallisable protein. Size-exclusion chromatography analysis showed Ch Tlp3-LBD is a monomer in solution. Ch Tlp3-LBD was crystallised using PEG 6000 and LiCl as the precipitants. The crystal lattice symmetry was P2221, with unit cell geometry of a = 82.0, b = 137.7, c = 56.1 Å, and α = β = γ = 90°. X-ray diffraction data have been acquired to 1.6 Å resolution using synchrotron radiation. Estimation of the Matthews coefficient (VM = 2.8 Å3 Da−1) and the outcome of molecular replacement suggested the asymmetric unit is composed of two protein molecules. This work lays the foundation for studies towards understanding the structural basis of ligand recognition by C. hepaticus Tlp3 and its role in pathogenesis. Full article
(This article belongs to the Section Biomolecular Crystals)
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18 pages, 2973 KB  
Article
A TAT Peptide-Functionalized Liposome Delivery Phage System (TAT-Lip@PHM) for an Enhanced Eradication of Intracellular MRSA
by Kaixin Liu, Xin Lu, Xudong Guo, Yi Yang, Wanying Liu, Hongbin Song and Rongtao Zhao
Pharmaceutics 2025, 17(6), 743; https://doi.org/10.3390/pharmaceutics17060743 - 5 Jun 2025
Viewed by 613
Abstract
Background: Intracellular bacteria frequently result in chronic and recurrent infections. MRSA is one of the most prevalent facultative intracellular bacteria in clinical infections. The drug resistance of MRSA and the difficulty of most antibiotics in entering cells result in a suboptimal clinical efficacy [...] Read more.
Background: Intracellular bacteria frequently result in chronic and recurrent infections. MRSA is one of the most prevalent facultative intracellular bacteria in clinical infections. The drug resistance of MRSA and the difficulty of most antibiotics in entering cells result in a suboptimal clinical efficacy of antibiotics in the treatment of intracellular MRSA. Bacteriophages represent a promising alternative therapy in the context of the current antimicrobial resistance crisis. Nevertheless, the low efficiency of phage entry into cells and their rapid inactivation remain challenges in the treatment of intracellular MRSA using phages. The utilization of functionalized carriers for the delivery of phages into cells and their protection represents a feasible strategy. Methods: In this study, a new MRSA bacteriophage (vB_SauS_PHM) was isolated from hospital sewage, exhibiting the characteristics of short incubation period, large lytic amount, and good environmental tolerance. Subsequently, vB_SauS_PHM was encapsulated by TAT peptide-functionalized liposomes through microfluidic technology and size-exclusion chromatography (SEC), forming a phage delivery system, designated TAT-Lip@PHM. Results: The encapsulation rate of the phage by TAT-Lip@PHM was 20.3%, and the cell entry efficiency was ≥90% after 8 h. The 24 h eradication rate of 300 μg/mL TAT-Lip@PHM against intracellular MRSA was 94.05% (superior to the 21.24% and 44.90% of vB_SauS_PHM and Lip@PHM, respectively), while the mammalian cell activity was >85% after 24 h incubation. Conclusions: The TAT-Lip@PHM effectively delivered the phage into the cell and showed an excellent killing effect on intracellular MRSA with low cytotoxicity. This work provides a technical reference for the application of phages in the treatment of intracellular bacterial infection. Full article
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