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Keywords = somatization

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19 pages, 9983 KB  
Article
Analysis of Lactation Performance and Mastitis Incidence in High- and Low-Yielding Dairy Cows Using DHI Data
by Qijun Zhou, Zijian Geng, Shuai Lian, Jianfa Wang and Rui Wu
Animals 2025, 15(17), 2495; https://doi.org/10.3390/ani15172495 (registering DOI) - 25 Aug 2025
Abstract
The DHI data is crucial for monitoring the udder health of dairy cows during the breeding process. This study aimed to investigate the factors influencing milk production in dairy cows throughout this period. We analyzed DHI data from Holstein dairy cows in the [...] Read more.
The DHI data is crucial for monitoring the udder health of dairy cows during the breeding process. This study aimed to investigate the factors influencing milk production in dairy cows throughout this period. We analyzed DHI data from Holstein dairy cows in the Heilongjiang region, alongside the incidence of mastitis. The findings revealed that high-yielding cows demonstrated significantly higher peak milk yield days, peak milk yield, urea nitrogen levels, 305-day milk yield, and persistency (p < 0.0001) compared to their low-yielding counterparts. Conversely, high-yielding cows exhibited lower protein rates, fat-to-protein ratios, and milk fat rates (p < 0.0001). Additionally, the somatic cell count (SCC) in high-yielding cows was significantly lower than that in low-yielding cows (p < 0.0001). The multivariate linear regression analysis of the DHI data indicated that parity was the primary determinant affecting both milk yield and SCC. Statistical analysis of cows with clinical mastitis revealed that those experiencing a single episode of clinical mastitis during the lactation period were predominantly in their first and second parities, while recurrent cases were primarily observed in the second and third parities. These results suggest that as the number of lactations increases, the SCC also rises, reflecting the cumulative impact of parity on the udder health of dairy cows. Full article
(This article belongs to the Section Cattle)
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12 pages, 4321 KB  
Article
Bilateral Salpingo-Oophorectomy Is Superior to Salpingectomy Alone in Preventing Non-Tubal Tumor Development in a Mouse Model of High-Grade Serous Carcinoma
by Yali Zhai, Eric R. Fearon and Kathleen R. Cho
Cancers 2025, 17(17), 2759; https://doi.org/10.3390/cancers17172759 - 24 Aug 2025
Abstract
Background/Objectives: High-grade serous carcinoma (HGSC) is the leading cause of ovarian cancer-related mortality. It usually arises from fallopian tube epithelium, with a smaller subset arising in non-tubal sites including the ovary or peritoneum. The origin of HGSCs without evidence of tubal involvement remains [...] Read more.
Background/Objectives: High-grade serous carcinoma (HGSC) is the leading cause of ovarian cancer-related mortality. It usually arises from fallopian tube epithelium, with a smaller subset arising in non-tubal sites including the ovary or peritoneum. The origin of HGSCs without evidence of tubal involvement remains unclear. Moreover, in women with genetic predisposition to developing HGSC, the additional protection afforded by prophylactic removal of the ovaries in addition to the fallopian tubes has not yet been established. Methods: We used a well-characterized genetically engineered mouse model (GEMM) of oviductal HGSC based on conditional, somatic inactivation of the Brca1, Trp53, Rb1, and Nf1 tumor suppressor genes (BPRN mice) to compare preventive effects for HGSC via bilateral salpingectomy versus bilateral salpingo-oophorectomy. We also explored the origins of non-tubal HGSCs in ectopic tubal-type epithelium (endosalpingiosis) present in the mouse ovaries and peritoneum. Results: While bilateral salpingectomy significantly reduced the incidence of HGSCs in the GEMM model, bilateral salpingo-oophorectomy completely prevented tumor development. We identified an example of HGSC with apparent origin in endosalpingiosis, implicating endosalpingiosis as a likely precursor for non-tubal HGSC. Conclusions: Our findings confirm the superiority of bilateral salpingo-oophorectomy over salpingectomy alone in reducing HGSC risk and affirm the rationale for surgical strategies to reduce HGSC risk in women carrying pathogenic variants of BRCA1/2 and other genes associated with homologous recombination deficiency. Our findings also illustrate how work with GEMMs can advance new insights into HGSC pathogenesis. Full article
(This article belongs to the Special Issue Gynecologic Cancer: Risk Factors, Interception and Prevention)
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22 pages, 1444 KB  
Article
Quarter-Level Milk Yield Recovery Following Clinical Mastitis: Associations with Milk Loss, Somatic Cell Count, Clinical Severity, and Pathogens
by Yifan Song, Lore D’Anvers, Martin Julius Gote, Ines Adriaens and Ben Aernouts
Agriculture 2025, 15(17), 1805; https://doi.org/10.3390/agriculture15171805 - 24 Aug 2025
Abstract
Understanding milk yield recovery following clinical mastitis (CM) and its influencing factors is essential for controlling the effect of mastitis on milk yield. This study investigated the associations between quarter-level milk yield recovery and milk loss, somatic cell count (SCC), clinical severity, and [...] Read more.
Understanding milk yield recovery following clinical mastitis (CM) and its influencing factors is essential for controlling the effect of mastitis on milk yield. This study investigated the associations between quarter-level milk yield recovery and milk loss, somatic cell count (SCC), clinical severity, and causative pathogens. Recovery was measured as percentage recovery for inflamed and uninflamed quarters separately. We analyzed 117 CM cases, identifying 117 quarter-level milk yield perturbations (qMYPs) in inflamed quarters and 299 in uninflamed quarters. The recovery of qMYPs was compared across quickly, slowly, and non-recovered groups for inflamed and uninflamed quarters, based on the average and slope of percentage recovery over time, using the Mann–Whitney test. Correlation and regression analyses were conducted to assess associations with milk loss, SCC, clinical severity, and pathogens. Inflamed quarters showed similar recovery to uninflamed quarters in recovered groups but significantly worse recovery in the non-recovered group (p < 0.05). In inflamed quarters, greater milk loss, higher SCC, more severe clinical signs, and major pathogens were associated with worse recovery (correlation < 0). In uninflamed quarters, these factors were linked to worse early recovery (correlation < 0), whileled to improved recovery over time (correlation > 0). Additionally, short-term and long-term recovery were influenced differently in inflamed and uninflamed quarters. These findings improve understanding of CM recovery and may support selective treatment, reduce disease impact, and enhance animal welfare in dairy production. Full article
(This article belongs to the Section Farm Animal Production)
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15 pages, 3707 KB  
Article
Conserved miR156 Mediates Phase-Specific Coordination Between Cotyledon Morphogenesis and Embryo Dormancy During Somatic Embryogenesis in Larix kaempferi
by Xin Li, Yuqin Huang, Wenhua Yang, Liwang Qi, Lifeng Zhang and Chenghao Li
Int. J. Mol. Sci. 2025, 26(17), 8206; https://doi.org/10.3390/ijms26178206 - 23 Aug 2025
Viewed by 52
Abstract
The miR156 family, crucial for phase transition and stress responses in plants, remains functionally uncharacterized in the ecologically and commercially important gymnosperm Larix kaempferi. This study systematically investigated L. kaempferi miR156 through phylogenetic analysis, structural prediction, expression profiling during somatic embryogenesis, and [...] Read more.
The miR156 family, crucial for phase transition and stress responses in plants, remains functionally uncharacterized in the ecologically and commercially important gymnosperm Larix kaempferi. This study systematically investigated L. kaempferi miR156 through phylogenetic analysis, structural prediction, expression profiling during somatic embryogenesis, and heterologous functional validation in Arabidopsis. Four MIR156 family members (LkMIR156s) were identified in Larix kaempferi, each with a characteristic stem-loop structure and highly conserved mature sequences. Computational predictions indicated that these LkMIR156s target four LkSPL family genes (LkSPL1, LkSPL2, LkSPL3, and LkSPL9). qRT-PCR analysis showed that mature LkmiR156s expression remained relatively low during early embryonic development but was significantly upregulated at the cotyledonary stage (21–42 days). Precursor transcript levels peaked earlier (around 28 days) than those of the mature LkmiR156, which remained highly expressed throughout cotyledonary embryo development. This sustained high expression coincided with cotyledon morphogenesis and embryonic dormancy. Functional validation via heterologous overexpression of LkMIR156b1 in Arabidopsis resulted in increased rosette leaf numbers (42.86% ± 6.19%) and individual leaf area (54.90% ± 6.86%), phenotypically consistent with the established role of miR156 in growth regulation. This study reveals the temporal expression dynamics of LkmiR156s during L. kaempferi somatic embryogenesis and its coordinated expression patterns with cotyledon development and embryonic dormancy. The functional conservation of the miR156-SPL module was confirmed in a model plant, providing key molecular insights into the developmental regulatory network of conifers. These findings offer potential strategies for optimizing somatic embryogenesis techniques in conifer species. Full article
(This article belongs to the Special Issue Plant Breeding and Genetics: New Findings and Perspectives)
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42 pages, 1210 KB  
Review
Comprehensive Prevention and Control of Mastitis in Dairy Cows: From Etiology to Prevention
by Wenjing Yu, Zixuan Zhang, Zhonghua Wang, Xueyan Lin, Xusheng Dong and Qiuling Hou
Vet. Sci. 2025, 12(9), 800; https://doi.org/10.3390/vetsci12090800 - 23 Aug 2025
Viewed by 212
Abstract
Mastitis, an inflammatory disease caused by the invasion of various pathogenic microorganisms into mammary gland tissue, is a core health issue plaguing the global dairy industry. The consequences of this disease are manifold. In addition to directly compromising the health and welfare of [...] Read more.
Mastitis, an inflammatory disease caused by the invasion of various pathogenic microorganisms into mammary gland tissue, is a core health issue plaguing the global dairy industry. The consequences of this disease are manifold. In addition to directly compromising the health and welfare of dairy cows, it also precipitates a substantial decline in lactation function, a precipitous drop in raw milk production, and alterations in milk composition (e.g., increased somatic cell counts and imbalanced ratios of milk protein to fat). These changes result in a marked degradation of milk quality and safety, and in turn, engender significant economic losses for the livestock industry. Therefore, the establishment and implementation of a comprehensive prevention and control system is a key strategy to effectively curb the occurrence of mastitis, reduce its incidence rate, and minimise economic losses. This review systematically explores the complex etiological factors and pathogenic mechanisms of mastitis in dairy cows, and summarises various diagnostic methods, including milk apparent indicators monitoring, pathogen detection, physiological parameter monitoring, omics technologies, and emerging technologies. Furthermore, it undertakes an analysis of treatment protocols for mastitis in dairy cows, with a particular emphasis on the significance of rational antibiotic use and alternative therapies. Moreover, it delineates preventive measures encompassing both environmental and hygiene management, and dairy cow health management. The objective of this paper is to provide a comprehensive and scientific theoretical basis and practical guidance for dairy farming practices. This will help to improve the health of dairy cows, ensure a stable supply of high-quality dairy products, and promote the sustainable and healthy development of the dairy farming industry. Full article
(This article belongs to the Special Issue Mammary Development and Health: Challenges and Advances)
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17 pages, 924 KB  
Systematic Review
Risk, Precipitating, and Perpetuating Factors in Functional Neurological Disorder: A Systematic Review Across Clinical Subtypes
by Ioannis Mavroudis, Katerina Franekova, Foivos Petridis, Alin Ciobîca, Gabriel Dăscălescu, Emil Anton, Ciprian Ilea, Sotirios Papagiannopoulos and Dimitrios Kazis
Brain Sci. 2025, 15(9), 907; https://doi.org/10.3390/brainsci15090907 - 23 Aug 2025
Viewed by 56
Abstract
Background: Functional Neurological Disorder (FND) encompasses conditions with neurological symptoms inconsistent with structural pathology, arising instead from complex interactions between psychological, biological, and social factors. Despite growing research, the etiological and risk factor landscape remains only partially understood, complicating diagnosis and treatment. Objective: [...] Read more.
Background: Functional Neurological Disorder (FND) encompasses conditions with neurological symptoms inconsistent with structural pathology, arising instead from complex interactions between psychological, biological, and social factors. Despite growing research, the etiological and risk factor landscape remains only partially understood, complicating diagnosis and treatment. Objective: This systematic review maps risk factors for major FND subtypes such as functional seizures (psychogenic non-epileptic seizures or PNES), functional cognitive disorder (FCD), functional movement disorders (FMD), functional weakness and sensory disturbances, functional visual symptoms, and functional gait abnormalities by categorizing predisposing, precipitating, and perpetuating influences. Methods: A systematic search of PubMed, PsycINFO, Scopus, and Web of Science initially identified 245 records. After removal of 64 duplicates, 181 studies were screened by title and abstract. Of these, 96 full texts were examined in detail, and finally 23 studies met the predefined inclusion criteria. Data were extracted and analyzed thematically within a biopsychosocial framework, with results summarized in subtype-specific profiles. Results: Childhood adversity, especially emotional, physical, or sexual abuse, emerged as a robust and consistent predisposing factor across PNES cohorts. Psychiatric history (notably anxiety, depression, and PTSD), neurodevelopmental traits (more frequent in FCD), and personality patterns such as alexithymia and somatization also contributed to vulnerability. Precipitating influences included acute psychological stress, intrapersonal conflict, or concurrent medical illness. Perpetuating factors comprise maladaptive illness beliefs, avoidance behaviors, insufficient explanation or validation by healthcare providers, and secondary gains related to disability. While several risk factors were shared across subtypes, others appeared subtype-specific (trauma was especially associated with PNES, whereas neurodevelopmental traits were more characteristic of FCD). Conclusions: FND arises from a dynamic interplay of predisposing, precipitating, and perpetuating factors, with both shared and subtype-specific influences. Recognizing this heterogeneity can enhance diagnostic precision, guide tailored intervention, and inform future research into the neurobiological and psychosocial mechanisms underlying FND. Full article
(This article belongs to the Section Neuropsychology)
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23 pages, 5200 KB  
Article
Genomic Insights into Tumorigenesis in Newly Diagnosed Multiple Myeloma
by Marina Kyriakou and Costas Papaloukas
Diagnostics 2025, 15(17), 2130; https://doi.org/10.3390/diagnostics15172130 - 23 Aug 2025
Viewed by 143
Abstract
Background: Multiple Myeloma (MM) is a malignant plasma cell dyscrasia that progresses through the consecutive asymptomatic, often undiagnosed, precancerous stages of Monoclonal Gammopathy of Undetermined Significance (MGUS) and Asymptomatic Multiple Myeloma (SMM). MM is characterized by low survival rates, severe complications and [...] Read more.
Background: Multiple Myeloma (MM) is a malignant plasma cell dyscrasia that progresses through the consecutive asymptomatic, often undiagnosed, precancerous stages of Monoclonal Gammopathy of Undetermined Significance (MGUS) and Asymptomatic Multiple Myeloma (SMM). MM is characterized by low survival rates, severe complications and drug resistance; therefore, understanding the molecular mechanisms of progression is crucial. This study aims to detect genetic mutations, both germline and somatic, that contribute to disease progression and drive tumorigenesis at the final stage of MM, using samples from patients presenting MGUS or SMM, and newly diagnosed MM patients. Methods: Mutations were identified through a fully computational pipeline, implemented in a Linux and RStudio environment, applied to each patient sequence, obtained through single-cell RNA-sequencing (scRNA-seq), separately. Structural and functional mutation types were identified by stage, along with the affected genes. The analysis included quality control, removal of the Unique Molecular Identifiers (UMIs), trimming, genome mapping and result visualization. Results: The findings revealed frequent germline and somatic mutations, with distinct structural and functional patterns across disease stages. Mutations in key genes were identified, pointing to molecules that may play a central role in carcinogenesis and disease progression. Notable examples include the HLA-A, HLA-B and HLA-C genes, as well as the KIF, EP400 and KDM gene families, with the first four already confirmed. Comparative analysis between the stages highlighted molecular transition events from one stage to another. Emphasis was given to novel genes discovered in newly diagnosed MM patients, that might contribute to the tumorigenesis that takes place. Conclusions: This study contributes to the understanding of the genetic basis of plasma cell dyscrasias and the transition events between the stages, offering insights that could aid in early detection and diagnosis, guide the development of personalized therapeutic strategies, and improve the understanding of mechanisms responsible for resistance to existing therapies. Full article
(This article belongs to the Section Pathology and Molecular Diagnostics)
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16 pages, 2019 KB  
Article
Molecular and Clinicopathological Profiling of Clear Cell Renal Cell Carcinoma with Rhabdoid Features: An Integrative Pathway-Based Stratification Approach
by Zhichun Lu, Qing Zhao, Huihong Xu, Mark H. Katz, David S. Wang, Christopher D. Andry and Shi Yang
Cancers 2025, 17(17), 2744; https://doi.org/10.3390/cancers17172744 - 23 Aug 2025
Viewed by 57
Abstract
Background: Clear cell renal cell carcinoma with rhabdoid features (ccRCC-R) is a highly aggressive variant of renal cell carcinoma that carries a poor prognosis and limited treatment options. Methods: To better define the clinicopathologic and molecular landscape of ccRCC-R, we conducted [...] Read more.
Background: Clear cell renal cell carcinoma with rhabdoid features (ccRCC-R) is a highly aggressive variant of renal cell carcinoma that carries a poor prognosis and limited treatment options. Methods: To better define the clinicopathologic and molecular landscape of ccRCC-R, we conducted an integrated clinicopathologic and molecular study of 17 tumors of ccRCC-R, utilizing comprehensive histomorphologic evaluation, immunohistochemistry, and targeted next-generation sequencing (NGS). Results: Histologically, all tumors demonstrated classic clear cell renal cell carcinoma morphology with focal to extensive rhabdoid differentiation, characterized by eccentrically located nuclei, prominent nucleoli, abundant eosinophilic cytoplasm, and paranuclear intracytoplasmic inclusion. Architectural alterations, including solid/sheet-like, alveolar/trabecular, and pseudopapillary growth patterns, were frequently observed. Immunohistochemically, tumors commonly exhibited loss of PAX8 and Claudin4 expression, preserved cytokeratin AE1/AE3 staining, and diffuse membranous CAIX expression. Frequent loss of SMARCA2 with retained SMARCA4 supported aberrations in chromatin remodeling. Unsupervised hierarchical clustering based on pathway-specific somatic mutations identified four distinct molecular subgroups defined by recurrent alterations in (1) DNA damage repair (DDR) genes, (2) chromatin remodeling genes, (3) PI3K/AKT/mTOR signaling components, and (4) MAPK pathway genes. Clinicopathologic correlation revealed that each subgroup was associated with unique biological characteristics and suggested distinct therapeutic vulnerabilities. Conclusions: Our findings underscore the molecular heterogeneity of ccRCC-R and support the utility of pathway-based stratification for guiding precision oncology approaches and biomarker-informed clinical trial design. Full article
(This article belongs to the Special Issue Recent Advances in Management of Renal Cell Carcinoma)
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10 pages, 307 KB  
Brief Report
Association Between Optical Coherence Tomography Angiography (OCTA)-Based Retinal Vascular Densities and Empathy in Young Adults
by Bess Yin-Hung Lam, Carole Leung, Ka-Shun Lei, Kaiyip Choi and Henry H. L. Chan
Bioengineering 2025, 12(9), 902; https://doi.org/10.3390/bioengineering12090902 - 22 Aug 2025
Viewed by 142
Abstract
With the use of Optical Coherence Tomography Angiography (OCTA), the present study is the first study to examine if retinal vascular densities (vessel densities and perfusion densities) could be associated with empathetic levels in young and non-clinical adults. Methods: Fifty-one university students aged [...] Read more.
With the use of Optical Coherence Tomography Angiography (OCTA), the present study is the first study to examine if retinal vascular densities (vessel densities and perfusion densities) could be associated with empathetic levels in young and non-clinical adults. Methods: Fifty-one university students aged from 18 to 25 years (26 males and 24 females) were recruited from a university in Hong Kong. OCTA was conducted to assess their retinal vessel density (VD) and perfusion density (PD) in different scan patterns over the macula (1 mm center subfield, 3 × 3 mm scan, 6 × 6 mm scan). Empathy (cognitive, affective, and somatic) was measured by using the Cognitive, Affective, and Somatic Empathy Scales (CASES). Results: After controlling for age, the multiple linear regression results showed that both the VD and PD in the 1 mm center subfield were significantly and negatively associated with the empathy total score, the affective empathy subscore, and the somatic empathy subscore, respectively (ps < 0.05). Conclusion: The present findings indicate that a lower level of empathy is associated with increased retinal vascular densities in the 1 mm center subfield, specifically involving variations in vascular density (VD) and perfusion density (PD). This suggests the dilation of retinal venules might lead to lower empathy. These results establish a foundation for future studies investigating the underlying mechanism of retinal imaging and empathy in healthy individuals. Full article
(This article belongs to the Special Issue Retinal Circuit Engineering)
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63 pages, 2516 KB  
Review
Advancing the Potential of Polyscias fruticosa as a Source of Bioactive Compounds: Biotechnological and Pharmacological Perspectives
by Anita A. Śliwińska and Karolina Tomiczak
Molecules 2025, 30(17), 3460; https://doi.org/10.3390/molecules30173460 - 22 Aug 2025
Viewed by 258
Abstract
Polyscias fruticosa (L.) Harms, a Southeast Asian medicinal plant of the Araliaceae family, has gained increasing attention due to its rich phytochemical profile and potential pharmacological applications. This review provides an up-to-date synthesis of biotechnological strategies and chemical investigations related to this species. [...] Read more.
Polyscias fruticosa (L.) Harms, a Southeast Asian medicinal plant of the Araliaceae family, has gained increasing attention due to its rich phytochemical profile and potential pharmacological applications. This review provides an up-to-date synthesis of biotechnological strategies and chemical investigations related to this species. In vitro propagation methods, including somatic embryogenesis, adventitious root, and cell suspension cultures, are discussed with emphasis on elicitation and bioreactor systems to enhance the production of secondary metabolites. Phytochemical analyses using gas chromatography–mass spectrometry (GC-MS), high-performance liquid chromatography (HPLC), and nuclear magnetic resonance (NMR) have identified over 120 metabolites, including triterpenoid saponins, polyphenols, sterols, volatile terpenoids, polyacetylenes, and fatty acids. Several compounds, such as tocopherols, conjugated linoleic acids, and alismol, were identified for the first time in the genus. These constituents exhibit antioxidant, anti-inflammatory, antimicrobial, antidiabetic, anticancer, and neuroprotective activities, with selected saponins (e.g., chikusetsusaponin IVa, Polyscias fruticosa saponin [PFS], zingibroside R1) showing confirmed molecular mechanisms of action. The combination of biotechnological tools with phytochemical and pharmacological evaluation supports P. fruticosa as a promising candidate for further functional, therapeutic, and nutraceutical development. This review also identifies knowledge gaps related to compound characterization and mechanistic studies, suggesting future directions for interdisciplinary research. Full article
(This article belongs to the Special Issue Natural Products with Pharmaceutical Activities)
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14 pages, 248 KB  
Article
The Therapeutic Benefits of Outdoor Experiences in India
by Soumya J. Mitra, Vinathe Sharma-Brymer, Denise Mitten and Janet Ady
Behav. Sci. 2025, 15(9), 1144; https://doi.org/10.3390/bs15091144 - 22 Aug 2025
Viewed by 64
Abstract
Drawing on in-depth interviews and thematic analysis, this study explores the therapeutic benefits of outdoor experiences through the lived experiences of 24 outdoor practitioners, including educators, environmentalists, therapists, and program leaders. Three core themes emerged: (a) nature as an emotional regulator and reflective [...] Read more.
Drawing on in-depth interviews and thematic analysis, this study explores the therapeutic benefits of outdoor experiences through the lived experiences of 24 outdoor practitioners, including educators, environmentalists, therapists, and program leaders. Three core themes emerged: (a) nature as an emotional regulator and reflective space; (b) therapeutic benefits of human–nature relationships; and (c) decolonial, bioregional, and cultural healing. Although practitioners facilitated physical challenges and skill-building for their participants, they primarily described outdoor experiences as relational, somatic, and culturally rooted practices that foster emotional regulation, grief processing, identity integration, and social inclusion. Healing emerged through solitude, silence, ancestral connections, sacred landscapes, inclusive dynamics, and the restoration of cultural knowledge. This study’s results challenge Western-centric outdoor education models by foregrounding Indigenous and postcolonial perspectives embedded in Indian ecological traditions. The results contribute to global discussions on decolonizing outdoor fields and offer implications for culturally responsive, emotionally safe, and ecologically grounded practices. Full article
15 pages, 1854 KB  
Article
Identification of SUMO Proteins and Their Expression Profile During Induction of Somatic Embryogenesis in Medicago truncatula Gaertn.
by Anna Kujawska and Paulina Król
Int. J. Mol. Sci. 2025, 26(17), 8133; https://doi.org/10.3390/ijms26178133 - 22 Aug 2025
Viewed by 92
Abstract
Somatic embryogenesis (SE) is a key plant regeneration technique involving the reprogramming of somatic cells into embryogenic structures. This developmental transition is regulated by complex genetic and epigenetic mechanisms, including post-translational modifications such as SUMOylation—the covalent attachment of small ubiquitin-like modifier (SUMO) proteins [...] Read more.
Somatic embryogenesis (SE) is a key plant regeneration technique involving the reprogramming of somatic cells into embryogenic structures. This developmental transition is regulated by complex genetic and epigenetic mechanisms, including post-translational modifications such as SUMOylation—the covalent attachment of small ubiquitin-like modifier (SUMO) proteins to target proteins, influencing their function, stability, and interactions. While SUMOylation is known to regulate plant development and stress responses, its role in SE has remained unknown. In this study, we investigated the involvement of the SUMOylation pathway in SE induction in Medicago truncatula. Using BLASTp analysis with known SUMO pathway proteins from Arabidopsis thaliana and Glycine max, we identified 10 homologous genes in M. truncatula. Phylogenetic relationships, gene structure, and conserved motif analyses confirmed their evolutionary conservation and characteristic domains. Expression profiling revealed significant upregulation of SUMO pathway genes—including Mt SUMO2, Mt SAE1-2, Mt SCE1a-b, Mt MMS21, and Mt PIAL2—in embryogenic cell lines during early SE induction. Additionally, in silico prediction of SUMOylation sites and SUMO-interacting motifs (SIMs) in 12 key SE regulatory proteins indicated a broad potential for SUMO-mediated regulation. These findings suggest that SUMOylation may contribute to the acquisition of embryogenic competence during somatic cell reprogramming in plants. Full article
(This article belongs to the Special Issue Molecular Approach to Fern Development)
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24 pages, 726 KB  
Review
Transcriptomic Comparisons of Somatic and Cancer Stem Cells
by Austin Drysch, Arun Ahuja, Dillan Prasad, Rishi Jain, Sharbel Romanos, Amr Alwakeal and Christopher Ahuja
Biomedicines 2025, 13(8), 2039; https://doi.org/10.3390/biomedicines13082039 - 21 Aug 2025
Viewed by 324
Abstract
Stem cells are essential for tissue maintenance, repair, and regeneration, yet their dysregulation gives rise to cancer stem cells (CSCs), which drive tumor progression, metastasis, and therapy resistance. Despite extensive research on stemness and oncogenesis, a critical gap remains in our understanding of [...] Read more.
Stem cells are essential for tissue maintenance, repair, and regeneration, yet their dysregulation gives rise to cancer stem cells (CSCs), which drive tumor progression, metastasis, and therapy resistance. Despite extensive research on stemness and oncogenesis, a critical gap remains in our understanding of how the transcriptomic landscapes of normal somatic stem cells (SSCs) diverge from those of CSCs to enable malignancy. This review synthesizes current knowledge of the key signaling pathways (Wnt, Notch, Hedgehog, TGF-β), transcription factors (Oct4, Sox2, Nanog, c-Myc, YAP/TAZ), and epigenetic mechanisms (chromatin remodeling, DNA methylation, microRNA regulation) that govern stemness in SSCs and are hijacked or dysregulated in CSCs. We highlight how context-specific modulation of these pathways distinguishes physiological regeneration from tumorigenesis. Importantly, we discuss the role of epithelial–mesenchymal transition (EMT), cellular plasticity, and microenvironmental cues in reprogramming and maintaining CSC phenotypes. By integrating transcriptomic and epigenetic insights across cancer biology and regenerative medicine, this review provides a framework for identifying vulnerabilities specific to CSCs while still preserving normal stem cell function. Understanding these distinctions is essential for the development of targeted therapies that minimize damage to healthy tissues and advance precision oncology. Full article
(This article belongs to the Special Issue Advances in Precision Cancer Therapy)
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15 pages, 11641 KB  
Article
Cell-Free DNA Based Next-Generation Sequencing Does Not Differentiate Between Oligoprogression and Systemic Progression in Non-Small Cell Lung Cancer Patients Treated with Immune Checkpoint Inhibitors—An Explorative Study
by Pim Rozendal, Hanneke Kievit, Paul van der Leest, Idris Bahce, Michiel Pegtel, Harry J. M. Groen, Léon C. van Kempen, T. Jeroen N. Hiltermann and Ed Schuuring
Int. J. Mol. Sci. 2025, 26(16), 8087; https://doi.org/10.3390/ijms26168087 - 21 Aug 2025
Viewed by 174
Abstract
Immune checkpoint inhibitors (ICIs) are a key treatment for advanced non-small cell lung cancer (NSCLC), but most patients will ultimately experience disease progression due to acquired resistance to ICI. Clinically, it is relevant to differentiate between systemic progression (SP) and oligoprogression (OP). Following [...] Read more.
Immune checkpoint inhibitors (ICIs) are a key treatment for advanced non-small cell lung cancer (NSCLC), but most patients will ultimately experience disease progression due to acquired resistance to ICI. Clinically, it is relevant to differentiate between systemic progression (SP) and oligoprogression (OP). Following SP, ICI treatment is usually discontinued, while in OP, patients are preferably treated with local ablative treatment with continuation of the ICI treatment. However, with progressive disease, it remains difficult to differentiate between true OP or SP. Circulating tumor DNA (ctDNA) analysis provides an accurate real-time reflection of the tumor burden. It remains elusive if ctDNA abundance and/or dynamics can discriminate between OP and SP. Therefore, the aim of this exploratory cohort study is to evaluate whether the sequential molecular tumor profiling of ctDNA is suitable for discriminating between true OP and SP in advanced NSCLC. Patients with stage III/IV NSCLC showing progression after ≥3 months of ICI were included. OP was defined retrospectively by RECIST response ≥ 6 months after local treatment and continued ICIs. Serial plasma samples were analyzed using the AVENIO ctDNA Expanded NGS assay targeting 77 cancer-related genes. Twenty patients (6 OP, 14 SP) were included. Somatic alterations were detected in 16 patients (median 4 mutations). No significant differences in baseline ctDNA levels, changes at progression, or mutation patterns were observed between OP and SP. Although ctDNA levels generally decreased early after the start of ICI treatment, and were increased at disease progression, mutational profiles of the 77 genes using the AVENIO Expanded ctDNA panel did not distinguish OP from SP. Full article
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18 pages, 494 KB  
Article
Competitive Anxiety, Sports Injury, and Playing Category in Youth Soccer Players
by Rafael Sánchez-Ruiz, Laura Gil-Caselles, Alejo García-Naveira, Félix Arbinaga, Roberto Ruiz-Barquín and Aurelio Olmedilla-Zafra
Children 2025, 12(8), 1094; https://doi.org/10.3390/children12081094 - 20 Aug 2025
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Abstract
Background: Adolescence is a critical period of physical, psychological, and social development, during which athletes are particularly vulnerable to stress and injuries. Competitive anxiety has been identified as a psychological factor that may increase injury risk; however, its role among young soccer players [...] Read more.
Background: Adolescence is a critical period of physical, psychological, and social development, during which athletes are particularly vulnerable to stress and injuries. Competitive anxiety has been identified as a psychological factor that may increase injury risk; however, its role among young soccer players remains underexplored. Objectives: This study aimed to analyse the association between competitive anxiety and injury vulnerability in young male soccer players aged 10 to 15 years. Methods: A total of 322 male soccer players from youth categories (Alevin, Infantil, and Cadete) participated. Competitive anxiety was assessed using the Sport Anxiety Scale-2 (SAS-2), and injury data were collected via a self-reported questionnaire covering the 2024–2025 season. Descriptive, comparative, and correlational analyses were conducted using non-parametric tests. Results: A high incidence of injuries was observed, increasing progressively with age category. In the overall sample, injuries were associated with higher levels of Somatic Anxiety, as well as with age and sporting experience, variables also linked to increased Worry and reduced Distraction. When analysed by category, no significant associations between anxiety and injury were found in Alevin players. In the Infantil group, injury incidence showed a slight increase with age and experience, but no association with anxiety was detected. Among Cadete players, injuries were positively related to Somatic Anxiety and Distraction, highlighting the influence of psychological factors at this developmental stage. Conclusions: These findings underscore the relevance of competitive anxiety, particularly Worry and Distraction, as risk factors for injury in youth soccer. The implementation of preventive psychological interventions and ongoing monitoring is recommended to reduce anxiety levels and injury vulnerability, thereby promoting safer and healthier athletic development among young soccer players. Full article
(This article belongs to the Section Pediatric Orthopedics & Sports Medicine)
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