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Crop Parameters Quantitative Retrieval and Monitoring with Remote Sensing

A special issue of Remote Sensing (ISSN 2072-4292). This special issue belongs to the section "Remote Sensing in Agriculture and Vegetation".

Deadline for manuscript submissions: closed (20 December 2022) | Viewed by 70332

Special Issue Editors

Special Issue Information

Dear Colleagues,

The distribution of crop areas and crop growth status are of great importance to decision support in crop production management practices for sustainable agriculture development and global food security. Today, remote sensing has been extensively used to monitor agricultural fields for crop field mapping, real-time estimation of crop growth status, determination of crop phenology, and crop yield estimation or forecasting. Various quantitative retrievals with remote sensing approaches can be used to improve crop monitoring and yield forecasting. Advanced algorithms can be developed for improved crop classification (e.g., long-term and high-resolution crop maps for maize and soybean), time series fitting for phenology detection, and crop growth parameter estimation. Applications can be at the global, national, regional, farm or field level, such as county-level yield prediction under conditions such as urbanization, climate change, and agricultural emissions, which can be conducted by quantitative remote sensing in crop growth models.

Prof. Dr. Jianxi Huang
Prof. Dr. Yanbo Huang
Dr. Qingling Wu
Prof. Dr. Wei Su
Guest Editors

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Keywords

  • remote sensing
  • crop production
  • crop phenology
  • crop type mapping
  • time series analysis
  • crop growth models
  • data assimilation
  • climate change
  • crop disaster monitoring
  • crop parameters retrieval

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Published Papers (21 papers)

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23 pages, 4288 KiB  
Article
An Adaptive Feature Fusion Network with Superpixel Optimization for Crop Classification Using Sentinel-2 Imagery
by Xiangyu Tian, Yongqing Bai, Guoqing Li, Xuan Yang, Jianxi Huang and Zhengchao Chen
Remote Sens. 2023, 15(8), 1990; https://doi.org/10.3390/rs15081990 - 10 Apr 2023
Cited by 4 | Viewed by 2363
Abstract
Crop-type mapping is the foundation of grain security and digital agricultural management. Accuracy, efficiency and large-scale scene consistency are required to perform crop classification from remote sensing images. Many current remote-sensing crop extraction methods based on deep learning cannot account for adaptation effects [...] Read more.
Crop-type mapping is the foundation of grain security and digital agricultural management. Accuracy, efficiency and large-scale scene consistency are required to perform crop classification from remote sensing images. Many current remote-sensing crop extraction methods based on deep learning cannot account for adaptation effects in large-scale, complex scenes. Therefore, this study proposes a novel adaptive feature-fusion network for crop classification using single-temporal Sentinel-2 images. The selective patch module implemented in the network can adaptively integrate the features of different patch sizes to assess complex scenes better. TabNet was used simultaneously to extract spectral information from the center pixels of the patches. Multitask learning was used to supervise the extraction process to improve the weight of the spectral characteristics while mitigating the negative impact of a small sample size. In the network, superpixel optimization was applied to post-process the classification results to improve the crop edges. By conducting the crop classification of peanut, rice, and corn based on Sentinel-2 images in 2022 in Henan Province, China, the novel method proposed in this paper was more accurate, indicated by an F1 score of 96.53%, than other mainstream methods. This indicates our model’s potential for application in crop classification in large scenes. Full article
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18 pages, 6878 KiB  
Article
Rapid Assessment of Architectural Traits in Pear Rootstock Breeding Program Using Remote Sensing Techniques
by Mugilan Govindasamy Raman, Afef Marzougui, Soon Li Teh, Zara B. York, Kate M. Evans and Sindhuja Sankaran
Remote Sens. 2023, 15(6), 1483; https://doi.org/10.3390/rs15061483 - 7 Mar 2023
Viewed by 2021
Abstract
Over the decades in the US, the introduction of rootstocks with precocity, stress tolerance, and dwarfing has increased significantly to improve the advancement in modern orchard systems for high production of tree fruits. In pear, it is difficult to establish modern high-density orchard [...] Read more.
Over the decades in the US, the introduction of rootstocks with precocity, stress tolerance, and dwarfing has increased significantly to improve the advancement in modern orchard systems for high production of tree fruits. In pear, it is difficult to establish modern high-density orchard systems due to the lack of appropriate vigor-controlling rootstocks. The measurement of traits using unmanned aerial vehicle (UAV) sensing techniques can help in identifying rootstocks suitable for higher-density plantings. The overall goal of this study is to optimize UAV flight parameters (sensor angles and direction) and preprocessing approaches to identify ideal flying parameters for data extraction and achieving maximum accuracy. In this study, five UAV missions were conducted to acquire high-resolution RGB imagery at different sensor inclination angles (90°, 65°, and 45°) and directions (forward and backward) from the pear rootstock breeding plot located at a research orchard belonging to the Washington State University (WSU) Tree Fruit Research and Extension Center in Wenatchee, WA, USA. The study evaluated the tree height and canopy volume extracted from four different integrated datasets and validated the accuracy with the ground reference data (n = 504). The results indicated that the 3D point cloud precisely measured the traits (0.89 < r < 0.92) compared to 2D datasets (0.51 < r < 0.75), especially with 95th percentile height measure. The integration of data acquired at different angles could be used to estimate the tree height and canopy volume. The integration of sensor angles during UAV flight is therefore critical for improving the accuracy of extracting architecture to account for varying tree characteristics and orchard settings and may be useful to further precision orchard management. Full article
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21 pages, 7789 KiB  
Article
Identifying Corn Lodging in the Mature Period Using Chinese GF-1 PMS Images
by Xianda Huang, Fu Xuan, Yi Dong, Wei Su, Xinsheng Wang, Jianxi Huang, Xuecao Li, Yelu Zeng, Shuangxi Miao and Jiayu Li
Remote Sens. 2023, 15(4), 894; https://doi.org/10.3390/rs15040894 - 6 Feb 2023
Cited by 7 | Viewed by 2109
Abstract
Efficient, fast, and accurate crop lodging monitoring is urgent for farmers, agronomists, insurance loss adjusters, and policymakers. This study aims to explore the potential of Chinese GF-1 PMS high-spatial-resolution images for corn lodging monitoring and to find a robust and efficient way to [...] Read more.
Efficient, fast, and accurate crop lodging monitoring is urgent for farmers, agronomists, insurance loss adjusters, and policymakers. This study aims to explore the potential of Chinese GF-1 PMS high-spatial-resolution images for corn lodging monitoring and to find a robust and efficient way to identify corn lodging accurately and efficiently. Three groups of image features and five machine-learning approaches are used for classifying non-lodged, moderately lodged, and severely lodged areas. Our results reveal that (1) the combination of spectral bands, optimized vegetation indexes, and texture features classify corn lodging with an overall accuracy of 93.81% and a Kappa coefficient of 0.91. (2) The random forest is an efficient, robust, and easy classifier to identify corn lodging with the F1-score of 0.95, 0.92, and 0.95 for non-lodged, moderately lodged, and severely lodged areas, respectively. (3) The GF-1 PMS image has great potential for identifying corn lodging on a regional scale. Full article
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19 pages, 6466 KiB  
Article
A Decision-Tree Approach to Identifying Paddy Rice Lodging with Multiple Pieces of Polarization Information Derived from Sentinel-1
by Xuemei Dai, Shuisen Chen, Kai Jia, Hao Jiang, Yishan Sun, Dan Li, Qiong Zheng and Jianxi Huang
Remote Sens. 2023, 15(1), 240; https://doi.org/10.3390/rs15010240 - 31 Dec 2022
Cited by 11 | Viewed by 2591
Abstract
Lodging is one of the typical abiotic adversities during paddy rice growth. In addition to affecting photosynthesis, it can seriously damage crop growth and development, such as reducing rice quality and hindering automated harvesting. It is, therefore, imperative to accurately and in good [...] Read more.
Lodging is one of the typical abiotic adversities during paddy rice growth. In addition to affecting photosynthesis, it can seriously damage crop growth and development, such as reducing rice quality and hindering automated harvesting. It is, therefore, imperative to accurately and in good time acquire crop-lodging areas for yield prediction, agricultural insurance claims, and disaster-management decisions. However, the accuracy requirements for crop-lodging monitoring remain challenging due to complicated impact factors. Aiming at identifying paddy rice lodging on Shazai Island, Guangdong, China, caused by heavy rainfall and strong wind, a decision-tree model was constructed using multiple-parameter information from Sentinel-1 SAR images and the in situ lodging samples. The model innovatively combined the five backscattering coefficients with five polarization decomposition parameters and quantified the importance of each parameter feature. It was found that the decision-tree method coupled with polarization decomposition can be used to obtain an accurate distribution of paddy rice-lodging areas. The results showed that: (1) Radar parameters can capture the changes in lodged paddy rice. The radar parameters that best distinguish paddy rice lodging are VV, VV+VH, VH/VV, and Span. (2) Span is the parameter with the strongest feature importance, which shows the necessity of adding polarization parameters to the classification model. (3) The dual-polarized Sentinel-1 database classification model can effectively extract the area of lodging paddy rice with an overall accuracy of 84.38%, and a total area precision of 93.18%. These observations can guide the future use of SAR-based information for crop-lodging assessment and post-disaster management. Full article
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21 pages, 5134 KiB  
Article
Developing a Dual-Stream Deep-Learning Neural Network Model for Improving County-Level Winter Wheat Yield Estimates in China
by Hai Huang, Jianxi Huang, Quanlong Feng, Junming Liu, Xuecao Li, Xinlei Wang and Quandi Niu
Remote Sens. 2022, 14(20), 5280; https://doi.org/10.3390/rs14205280 - 21 Oct 2022
Cited by 16 | Viewed by 2842
Abstract
Accurate and timely crop yield prediction over large spatial regions is critical to national food security and sustainable agricultural development. However, designing a robust model for crop yield prediction over a large spatial region remains challenging due to inadequate surveyed samples and an [...] Read more.
Accurate and timely crop yield prediction over large spatial regions is critical to national food security and sustainable agricultural development. However, designing a robust model for crop yield prediction over a large spatial region remains challenging due to inadequate surveyed samples and an under-development of deep-learning frameworks. To tackle this issue, we integrated multi-source (remote sensing, weather, and soil properties) data into a dual-stream deep-learning neural network model for winter wheat in China’s major planting regions. The model consists of two branches for robust feature learning: one for sequential data (remote sensing and weather series data) and the other for statical data (soil properties). The extracted features by both branches were aggregated through an adaptive fusion model to forecast the final wheat yield. We trained and tested the model by using official county-level statistics of historical winter wheat yields. The model achieved an average R2 of 0.79 and a root-mean-square error of 650.21 kg/ha, superior to the compared methods and outperforming traditional machine-learning methods. The dual-stream deep-learning neural network model provided decent in-season yield prediction, with an error of about 13% compared to official statistics about two months before harvest. By effectively extracting and aggregating features from multi-source datasets, the new approach provides a practical approach to predicting winter wheat yields at the county scale over large spatial regions. Full article
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18 pages, 103960 KiB  
Article
Bayesian Posterior-Based Winter Wheat Yield Estimation at the Field Scale through Assimilation of Sentinel-2 Data into WOFOST Model
by Yantong Wu, Wenbo Xu, Hai Huang and Jianxi Huang
Remote Sens. 2022, 14(15), 3727; https://doi.org/10.3390/rs14153727 - 3 Aug 2022
Cited by 9 | Viewed by 3058
Abstract
Accurate and timely regional crop yield information, particularly field-level yield estimation, is essential for commodity traders and producers in planning production, growing, harvesting, and other interconnected marketing activities. In this study, we propose a novel data assimilation framework. Firstly, we construct the likelihood [...] Read more.
Accurate and timely regional crop yield information, particularly field-level yield estimation, is essential for commodity traders and producers in planning production, growing, harvesting, and other interconnected marketing activities. In this study, we propose a novel data assimilation framework. Firstly, we construct the likelihood constraints for a process-based crop growth model based on the previous year’s statistical yield and the current year’s field observations. Then, we infer the posterior sets of model-simulated time-series LAI and the final yield of winter wheat with a Markov chain Monte Carlo (MCMC) method for each meteorological data grid of the European Centre for Medium-Range Weather Forecasts Reanalysis (v5ERA5). Finally, we estimate the winter wheat yield at the spatial resolution of 10 m by combining Sentinel-2 LAI and the WOFOST model in Hengshui, the prefecture-level city of Hebei province of China. The results show that the proposed framework can estimate the winter wheat yield with a coefficient of determination R2 equal to 0.29 and mean absolute percentage error MAPE equal to 7.20% compared to within-field measurements. However, the agricultural stress that crop growth models cannot quantitatively simulate, such as lodging, can greatly reduce the accuracy of yield estimates. Full article
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16 pages, 3851 KiB  
Article
Grassland Aboveground Biomass Estimation through Assimilating Remote Sensing Data into a Grass Simulation Model
by Yuxin Zhang, Jianxi Huang, Hai Huang, Xuecao Li, Yunxiang Jin, Hao Guo, Quanlong Feng and Yuanyuan Zhao
Remote Sens. 2022, 14(13), 3194; https://doi.org/10.3390/rs14133194 - 3 Jul 2022
Cited by 4 | Viewed by 3360
Abstract
Grassland aboveground biomass is crucial for evaluating grassland desertification, degradation, and grassland and livestock balance. Given the lack of understanding of mechanical processes and limited simulation accuracy for grassland aboveground biomass estimation, especially at the regional scale, this study investigates a new method [...] Read more.
Grassland aboveground biomass is crucial for evaluating grassland desertification, degradation, and grassland and livestock balance. Given the lack of understanding of mechanical processes and limited simulation accuracy for grassland aboveground biomass estimation, especially at the regional scale, this study investigates a new method combining remote sensing data assimilation technology and a grassland process-based model to estimate regional grassland biomass, focusing on improving the simulation accuracy by modeling and revealing the mechanism interpretability of grassland growth processes. Xilinhot City of Inner Mongolia was used as the study area. The ModVege model was selected as the grass dynamic simulation model. A likelihood function was constructed composed of the LAI, grassland aboveground biomass, and daily measurements wherein the accumulated temperature reached ST2 (the temperature sum defining the end of reproductive growth). Then, the Markov chain Monte Carlo (MCMC) methodology was adapted to calibrate the ModVege model by maximizing the likelihood function. The time-series LAI from MOD15A3H was assimilated into the ModVege model, and the model parameters ST2 and BMGV0 (initial biomass and green vegetative tissues, respectively) were optimized at a 500 m pixel scale based on the four-dimensional variational method (4DVar) method. Compared with August 15th, the RMSE and MAPE of aboveground biomass were 242 kg/ha and 10%, respectively, after calibration. Data assimilation improved this accuracy, with the RMSE decreasing to 214 kg/ha. Overall, the aboveground grassland biomass of Xilinhot City shows spatial distribution patterns of high value in the northeast and low value in the central and southeast areas. Generally, the method implemented in this study provides an important reference for the aboveground biomass estimation of regional grassland. Full article
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20 pages, 7192 KiB  
Article
Estimation of Canopy Structure of Field Crops Using Sentinel-2 Bands with Vegetation Indices and Machine Learning Algorithms
by Xiaochen Zou, Sunan Zhu and Matti Mõttus
Remote Sens. 2022, 14(12), 2849; https://doi.org/10.3390/rs14122849 - 14 Jun 2022
Cited by 7 | Viewed by 2832
Abstract
Leaf angle distribution (LAD), or the leaf mean tilt angle (MTA) capturing its central value, is used to quantify the direction of the leaf surface in a canopy and is one of the most important canopy structuraltraits. Combined with the other important structure [...] Read more.
Leaf angle distribution (LAD), or the leaf mean tilt angle (MTA) capturing its central value, is used to quantify the direction of the leaf surface in a canopy and is one of the most important canopy structuraltraits. Combined with the other important structure parameter, leaf area index (LAI), LAD determines the light interception of a crop canopy. However, unlike LAI, only few studies have addressed the direct retrieval of LAD or MTA from remote sensing data. Recently, it has been shown that the red edge is a key spectral region where the effect of leaf angle on crop spectral reflectance can be separated from that of other structural variables. The Multispectral imager (MSI) onboard the Sentinel-2 (S2) satellite has two specially designed red-edge channels in this spectral region and thus can potentially be used for large-scale mapping of MTA at high spatial and temporal resolutions. Unfortunately, no field data on leaf angles at the scale of S2 pixel are available. Therefore, we simulated 5000 observations of different crops using the PROSAIL canopy reflectance model. Further, we used the MTA and LAI data of six crop species growing in 162 experimental plots in Finland and simulated their reflectance signal in S2 bands by resampling AISA airborne imaging spectroscopy data. Four common machine learning regression algorithms (random forest, support vector machine, multilayer perceptron network and partial least squares regression) were examined for retrieving canopy structure parameters, including leaf angle, from the simulated reflectances. Further, we analyzed the utility of 12 vegetation indices (VIs) well known to be sensitive to canopy structure for canopy structure estimation. Six of the studied indices used information from the visible part of the spectrum and the near infrared (NIR) while another six were selected to also utilize the red edge bands specific to S2. We found that S2 band 6 in the red edge had a strong correlation with MTA (R2 = 0.79 in model simulation and R2 = 0.87 in field measurements) but a low correlation with LAI (R2 = 0.07 in model simulation and R2= 0.06 in field measurements). Of the six red edge-based VIs, four (NDVIRE, CIRE, WDRVIRE and MSRRE) depended less on MTA than the visible NIR-based VIs and thus could be useful for estimating LAI for any LAD. The other two red edge-based VIs, IRECI and S2REP, had stronger correlations with MTA (R2 = 0.67 and 0.52, respectively) than LAI (R2 = 0.24 and 0.19, respectively). Additionally, MTA was accurately estimated (RMSE = 1.1–2.4° in model simulations and RMSE = 2.2–3.9° in field measurements) using the four 10 m spatial resolution bands with the RF, SVM and MLP algorithms, without information in the red edge. These promising results indicate the capability of S2 in accurately mapping the MTA of field crops on a large scale. Full article
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21 pages, 7852 KiB  
Article
Research on Service Value and Adaptability Zoning of Grassland Ecosystem in Ethiopia
by Xiwang Zhang, Weiwei Zhu, Nana Yan, Panpan Wei, Yifan Zhao, Hao Zhao and Liang Zhu
Remote Sens. 2022, 14(11), 2722; https://doi.org/10.3390/rs14112722 - 6 Jun 2022
Cited by 3 | Viewed by 2159
Abstract
The evaluation of the ecosystem service value (ESV) and its regionalization toward coordinating ecological protection and socioeconomic development is of great significance. In this study, we developed a classification method based on the Random Forest algorithm and a feature optimization method to identify [...] Read more.
The evaluation of the ecosystem service value (ESV) and its regionalization toward coordinating ecological protection and socioeconomic development is of great significance. In this study, we developed a classification method based on the Random Forest algorithm and a feature optimization method to identify grassland types. Then, we proposed an approach to quantitatively evaluate the ESV of the grassland ecosystem in Ethiopia, in which net primary production derived from remote sensing was used to evaluate organic matter production value (ESV1), promoting nutrient circulation value (ESV2), and gas regulation value (ESV3), the RUSLE model was used to evaluate soil conservation value (ESV4), and cumulative rainfall was used to calculate water conservation value (ESV5). By integrating the mean ESV under various influencing factors, the zoning map of grassland ecosystem service value was obtained. Our study found that more fine grassland types can be well classified with the overall accuracy of 86.52%. And the classification results are the basis of the ESV analysis. The total ESV of grassland ecosystems was found to be USD 105,221.72 million, of which ESV4 was the highest, accounting for 44.09% of the total ESV. The spatial analysis of ESV showed that the differences were due to the impacts of grassland types, elevation, slope, and rainfall. It was found that the grassland is suitable to grow in the elevation zone between approximately 1000 and 2000 m, and the larger the slope and rainfall are, the greater the mean ESV is. The zoning map was used to conclude that the areas from approximately the fourth to sixth level (only 34.78% of the total grassland area, but 65.94% of the total ESV) have better growth status and development potential. The results provide references and bases to support the local coordination and planning of various grassland resources and form reasonable resource utilization and protection measures. Full article
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21 pages, 4773 KiB  
Article
Integrating the Textural and Spectral Information of UAV Hyperspectral Images for the Improved Estimation of Rice Aboveground Biomass
by Tianyue Xu, Fumin Wang, Lili Xie, Xiaoping Yao, Jueyi Zheng, Jiale Li and Siting Chen
Remote Sens. 2022, 14(11), 2534; https://doi.org/10.3390/rs14112534 - 25 May 2022
Cited by 33 | Viewed by 3087
Abstract
The accurate and rapid estimation of the aboveground biomass (AGB) of rice is crucial to food security. Unmanned aerial vehicles (UAVs) mounted with hyperspectral sensors can obtain images of high spectral and spatial resolution in a quick and effective manner. Integrating UAV-based spatial [...] Read more.
The accurate and rapid estimation of the aboveground biomass (AGB) of rice is crucial to food security. Unmanned aerial vehicles (UAVs) mounted with hyperspectral sensors can obtain images of high spectral and spatial resolution in a quick and effective manner. Integrating UAV-based spatial and spectral information has substantial potential for improving crop AGB estimation. Hyperspectral remote-sensing data with more continuous reflectance information on ground objects provide more possibilities for band selection. The use of band selection for the spectral vegetation index (VI) has been discussed in many studies, but few studies have paid attention to the band selection of texture features in rice AGB estimation. In this study, UAV-based hyperspectral images of four rice varieties in five nitrogen treatments (N0, N1, N2, N3, and N4) were obtained. First, multiple spectral bands were used to identify the optimal bands of the spectral vegetation indices, as well as the texture features; next, the vegetation index model (VI model), the vegetation index combined with the corresponding-band textures model (VI+CBT model), and the vegetation index combined with the full-band textures model (VI+FBT model) were established to compare their respective rice AGB estimation abilities. The results showed that the optimal bands of the spectral and textural information for AGB monitoring were inconsistent. The red-edge and near-infrared bands demonstrated a strong correlation with the rice AGB in the spectral dimension, while the green and red bands exhibited a high correlation with the rice AGB in the spatial dimension. The ranking of the monitoring accuracies of the three models, from highest to lowest, was: the VI+FBT model, then the VI+CBT model, and then the VI model. Compared with the VI model, the R2 of the VI+FBT model and the VI+CBT model increased by 1.319% and 9.763%, respectively. The RMSE decreased by 2.070% and 16.718%, respectively, while the rRMSE decreased by 2.166% and 16.606%, respectively. The results indicated that the integration of vegetation indices and textures can significantly improve the accuracy of rice AGB estimation. The full-band textures contained richer information that was highly related to rice AGB. The VI model at the tillering stage presented the greatest sensitivity to the integration of textures, and the models in the N3 treatment (1.5 times the normal nitrogen level) gave the best AGB estimation compared with the other nitrogen treatments. This research proposes a reliable modeling framework for monitoring rice AGB and provides scientific support for rice-field management. Full article
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15 pages, 4363 KiB  
Article
Soybean EOS Spatiotemporal Characteristics and Their Climate Drivers in Global Major Regions
by Zihang Lou, Dailiang Peng, Xiaoyang Zhang, Le Yu, Fumin Wang, Yuhao Pan, Shijun Zheng, Jinkang Hu, Songlin Yang, Yue Chen and Shengwei Liu
Remote Sens. 2022, 14(8), 1867; https://doi.org/10.3390/rs14081867 - 13 Apr 2022
Cited by 1 | Viewed by 2212
Abstract
Currently, analyses related the status of soybeans, a major oil crop, as well as the related climate drivers, are based on on-site data and are generally focused on a particular country or region. This study used remote sensing, meteorological, and statistical data products [...] Read more.
Currently, analyses related the status of soybeans, a major oil crop, as well as the related climate drivers, are based on on-site data and are generally focused on a particular country or region. This study used remote sensing, meteorological, and statistical data products to analyze spatiotemporal variations at the end of the growing season (EOS) for soybeans in the world’s major soybean-growing areas. The ridge regression estimation model calculates the average annual temperature, precipitation, and total radiation contributions to phenological changes. A systematic analysis of the spatiotemporal changes in the EOS and the associated climate drivers since the beginning of the 21st century shows the following: (1) in India, soybean EOS is later than in China and the United States. The main soybean-growing areas in the southern hemisphere are concentrated in South America, where two crops are planted yearly. (2) In most of the world’s soybean-growing regions, the rate change of the EOS is ±2 days/year. In the Mississippi River Valley, India, and South America (the first quarter), the soybean EOS is generally occurring earlier, whereas, in northeast China, it is generally occurring later. (3) The relative contributions of different meteorological factors to the soybean EOS vary between soybean-growing areas; there are also differences within the individual areas. This study provides a solid foundation for understanding the spatiotemporal changes in soybean crops in the world’s major soybean-growing areas and spatiotemporal variations in the effects of climate change on soybean EOS. Full article
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19 pages, 9652 KiB  
Article
Developing High-Resolution Crop Maps for Major Crops in the European Union Based on Transductive Transfer Learning and Limited Ground Data
by Yuchuan Luo, Zhao Zhang, Liangliang Zhang, Jichong Han, Juan Cao and Jing Zhang
Remote Sens. 2022, 14(8), 1809; https://doi.org/10.3390/rs14081809 - 8 Apr 2022
Cited by 18 | Viewed by 3814
Abstract
Precise and timely information on crop spatial distribution over large areas is paramount to agricultural monitoring, food security, and policy development. Currently, automatically classifying crop types at a large scale is challenging due to the scarcity of ground data. Although previous studies have [...] Read more.
Precise and timely information on crop spatial distribution over large areas is paramount to agricultural monitoring, food security, and policy development. Currently, automatically classifying crop types at a large scale is challenging due to the scarcity of ground data. Although previous studies have indicated that transductive transfer learning (TTL) is a promising method to address this problem, it performs poorly within regions where crop compositions and phenology differ largely. Here we transferred random forest classifiers trained in limited regions with diversified growing conditions and land covers to the rest of the study area where ground data are scarce, with more than 130,000 Sentinel-2 images processed using the Google Earth Engine (GEE) platform. We established the 10 m crop maps for four major crops (i.e., maize, rapeseed, winter, and spring Triticeae crops) across 10 European Union (EU) countries from 2018 to 2019. The final crop maps had a high accuracy with overall accuracy generally greater than 0.89, with user’s accuracy and producer’s accuracy ranging from 0.72 to 0.98. Moreover, the resulting maps were consistent with the NUTS-2 level official statistics, with R2 consistently greater than 0.9. We further analyzed the crop rotation patterns and found that the rotation intervals across these EU countries were generally at least one year. Maize was dominantly rotated with winter Triticeae crops or converted to other land covers in the following year. Rapeseed was generally grown in rotation with winter Triticeae crops, whereas the rotation patterns of winter and spring Triticeae crops were more diversified. Red Edge Position (REP) and Normalized Difference Yellow Index (NDYI) played significant roles in crop classification across the EU. This study highlights the potential of the developed TTL method for crop classification over large spatial extents where labeled data are limited and the differences in crop compositions and phenology are relatively large. Full article
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22 pages, 6462 KiB  
Article
Spatial Transferability of Random Forest Models for Crop Type Classification Using Sentinel-1 and Sentinel-2
by Aiym Orynbaikyzy, Ursula Gessner and Christopher Conrad
Remote Sens. 2022, 14(6), 1493; https://doi.org/10.3390/rs14061493 - 20 Mar 2022
Cited by 29 | Viewed by 3965
Abstract
Large-scale crop type mapping often requires prediction beyond the environmental settings of the training sites. Shifts in crop phenology, field characteristics, or ecological site conditions in the previously unseen area, may reduce the classification performance of machine learning classifiers that often overfit to [...] Read more.
Large-scale crop type mapping often requires prediction beyond the environmental settings of the training sites. Shifts in crop phenology, field characteristics, or ecological site conditions in the previously unseen area, may reduce the classification performance of machine learning classifiers that often overfit to the training sites. This study aims to assess the spatial transferability of Random Forest models for crop type classification across Germany. The effects of different input datasets, i.e., only optical, only Synthetic Aperture Radar (SAR), and optical-SAR data combination, and the impact of spatial feature selection were systematically tested to identify the optimal approach that shows the highest accuracy in the transfer region. The spatial feature selection, a feature selection approach combined with spatial cross-validation, should remove features that carry site-specific information in the training data, which in turn can reduce the accuracy of the classification model in previously unseen areas. Seven study sites distributed over Germany were analyzed using reference data for the major 11 crops grown in the year 2018. Sentinel-1 and Sentinel-2 data from October 2017 to October 2018 were used as input. The accuracy estimation was performed using the spatially independent sample sets. The results of the optical-SAR combination outperformed those of single sensors in the training sites (maximum F1-score–0.85), and likewise in the areas not covered by training data (maximum F1-score–0.79). Random forest models based on only SAR features showed the lowest accuracy losses when transferred to unseen regions (average F1loss–0.04). In contrast to using the entire feature set, spatial feature selection substantially reduces the number of input features while preserving good predictive performance on unseen sites. Altogether, applying spatial feature selection to a combination of optical-SAR features or using SAR-only features is beneficial for large-scale crop type classification where training data is not evenly distributed over the complete study region. Full article
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26 pages, 4986 KiB  
Article
Combining Crop Modeling with Remote Sensing Data Using a Particle Filtering Technique to Produce Real-Time Forecasts of Winter Wheat Yields under Uncertain Boundary Conditions
by Hossein Zare, Tobias K. D. Weber, Joachim Ingwersen, Wolfgang Nowak, Sebastian Gayler and Thilo Streck
Remote Sens. 2022, 14(6), 1360; https://doi.org/10.3390/rs14061360 - 11 Mar 2022
Cited by 11 | Viewed by 3923
Abstract
Within-season crop yield forecasting at national and regional levels is crucial to ensure food security. Yet, forecasting is a challenge because of incomplete knowledge about the heterogeneity of factors determining crop growth, above all management and cultivars. This motivates us to propose a [...] Read more.
Within-season crop yield forecasting at national and regional levels is crucial to ensure food security. Yet, forecasting is a challenge because of incomplete knowledge about the heterogeneity of factors determining crop growth, above all management and cultivars. This motivates us to propose a method for early forecasting of winter wheat yields in low-information systems regarding crop management and cultivars, and uncertain weather condition. The study was performed in two contrasting regions in southwest Germany, Kraichgau and Swabian Jura. We used in-season green leaf area index (LAI) as a proxy for end-of-season grain yield. We applied PILOTE, a simple and computationally inexpensive semi-empirical radiative transfer model to produce yield forecasts and assimilated LAI data measured in-situ and sensed by satellites (Landsat and Sentinel-2). To assimilate the LAI data into the PILOTE model, we used the particle filtering method. Both weather and sowing data were treated as random variables, acknowledging principal sources of uncertainties to yield forecasting. As such, we used the stochastic weather generator MarkSim® GCM to produce an ensemble of uncertain meteorological boundary conditions until the end of the season. Sowing dates were assumed normally distributed. To evaluate the performance of the data assimilation scheme, we set up the PILOTE model without data assimilation, treating weather data and sowing dates as random variables (baseline Monte Carlo simulation). Data assimilation increased the accuracy and precision of LAI simulation. Increasing the number of assimilation times decreased the mean absolute error (MAE) of LAI prediction from satellite data by ~1 to 0.2 m2/m2. Yield prediction was improved by data assimilation as compared to the baseline Monte Carlo simulation in both regions. Yield prediction by assimilating satellite-derived LAI showed similar statistics as assimilating the LAI data measured in-situ. The error in yield prediction by assimilating satellite-derived LAI was 7% in Kraichgau and 4% in Swabian Jura, whereas the yield prediction error by Monte Carlo simulation was 10 percent in both regions. Overall, we conclude that assimilating even noisy LAI data before anthesis substantially improves forecasting of winter wheat grain yield by reducing prediction errors caused by uncertainties in weather data, incomplete knowledge about management, and model calibration uncertainty. Full article
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21 pages, 3947 KiB  
Article
Land Surface Phenology Retrieval through Spectral and Angular Harmonization of Landsat-8, Sentinel-2 and Gaofen-1 Data
by Jun Lu, Tao He, Dan-Xia Song and Cai-Qun Wang
Remote Sens. 2022, 14(5), 1296; https://doi.org/10.3390/rs14051296 - 7 Mar 2022
Cited by 10 | Viewed by 3539
Abstract
Land Surface Phenology is an important characteristic of vegetation, which can be informative of its response to climate change. However, satellite-based identification of vegetation transition dates is hindered by inconsistencies in different observation platforms, including band settings, viewing angles, and scale effects. Therefore, [...] Read more.
Land Surface Phenology is an important characteristic of vegetation, which can be informative of its response to climate change. However, satellite-based identification of vegetation transition dates is hindered by inconsistencies in different observation platforms, including band settings, viewing angles, and scale effects. Therefore, time-series data with high consistency are necessary for monitoring vegetation phenology. This study proposes a data harmonization approach that involves band conversion and bidirectional reflectance distribution function (BRDF) correction to create normalized reflectance from Landsat-8, Sentinel-2A, and Gaofen-1 (GF-1) satellite data, characterized by the same spectral and illumination-viewing angles as the Moderate-Resolution Imaging Spectroradiometer (MODIS) and Nadir BRDF Adjusted Reflectance (NBAR). The harmonized data are then subjected to the spatial and temporal adaptive reflectance fusion model (STARFM) to produce time-series data with high spatio–temporal resolution. Finally, the transition date of typical vegetation was estimated using regular 30 m spatial resolution data. The results show that the data harmonization method proposed in this study assists in improving the consistency of different observations under different viewing angles. The fusion result of STARFM was improved after eliminating differences in the input data, and the accuracy of the remote-sensing-based vegetation transition date was improved by the fused time-series curve with the input of harmonized data. The root mean square error (RMSE) estimation of the vegetation transition date decreased by 9.58 days. We concluded that data harmonization eliminates the viewing-angle effect and is essential for time-series vegetation monitoring through improved data fusion. Full article
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20 pages, 10468 KiB  
Article
Retrieval of Crop Variables from Proximal Multispectral UAV Image Data Using PROSAIL in Maize Canopy
by Erekle Chakhvashvili, Bastian Siegmann, Onno Muller, Jochem Verrelst, Juliane Bendig, Thorsten Kraska and Uwe Rascher
Remote Sens. 2022, 14(5), 1247; https://doi.org/10.3390/rs14051247 - 3 Mar 2022
Cited by 22 | Viewed by 4624
Abstract
Mapping crop variables at different growth stages is crucial to inform farmers and plant breeders about the crop status. For mapping purposes, inversion of canopy radiative transfer models (RTMs) is a viable alternative to parametric and non-parametric regression models, which often lack transferability [...] Read more.
Mapping crop variables at different growth stages is crucial to inform farmers and plant breeders about the crop status. For mapping purposes, inversion of canopy radiative transfer models (RTMs) is a viable alternative to parametric and non-parametric regression models, which often lack transferability in time and space. Due to the physical nature of RTMs, inversion outputs can be delivered in sound physical units that reflect the underlying processes in the canopy. In this study, we explored the capabilities of the coupled leaf–canopy RTM PROSAIL applied to high-spatial-resolution (0.015 m) multispectral unmanned aerial vehicle (UAV) data to retrieve the leaf chlorophyll content (LCC), leaf area index (LAI) and canopy chlorophyll content (CCC) of sweet and silage maize throughout one growing season. Two different retrieval methods were tested: (i) applying the RTM inversion scheme to mean reflectance data derived from single breeding plots (mean reflectance approach) and (ii) applying the same inversion scheme to an orthomosaic to separately retrieve the target variables for each pixel of the breeding plots (pixel-based approach). For LCC retrieval, soil and shaded pixels were removed by applying simple vegetation index thresholding. Retrieval of LCC from UAV data yielded promising results compared to ground measurements (sweet maize RMSE = 4.92 µg/m2, silage maize RMSE = 3.74 µg/m2) when using the mean reflectance approach. LAI retrieval was more challenging due to the blending of sunlit and shaded pixels present in the UAV data, but worked well at the early developmental stages (sweet maize RMSE = 0.70 m2/m2, silage RMSE = 0.61 m2/m2 across all dates). CCC retrieval significantly benefited from the pixel-based approach compared to the mean reflectance approach (RMSEs decreased from 45.6 to 33.1 µg/m2). We argue that high-resolution UAV imagery is well suited for LCC retrieval, as shadows and background soil can be precisely removed, leaving only green plant pixels for the analysis. As for retrieving LAI, it proved to be challenging for two distinct varieties of maize that were characterized by contrasting canopy geometry. Full article
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28 pages, 17530 KiB  
Article
Cotton Classification Method at the County Scale Based on Multi-Features and Random Forest Feature Selection Algorithm and Classifier
by Hao Fei, Zehua Fan, Chengkun Wang, Nannan Zhang, Tao Wang, Rengu Chen and Tiecheng Bai
Remote Sens. 2022, 14(4), 829; https://doi.org/10.3390/rs14040829 - 10 Feb 2022
Cited by 54 | Viewed by 5775
Abstract
Accurate cotton maps are crucial for monitoring cotton growth and precision management. The paper proposed a county-scale cotton mapping method by using random forest (RF) feature selection algorithm and classifier based on selecting multi-features, including spectral, vegetation indices, and texture features. The contribution [...] Read more.
Accurate cotton maps are crucial for monitoring cotton growth and precision management. The paper proposed a county-scale cotton mapping method by using random forest (RF) feature selection algorithm and classifier based on selecting multi-features, including spectral, vegetation indices, and texture features. The contribution of texture features to cotton classification accuracy was also explored in addition to spectral features and vegetation index. In addition, the optimal classification time, feature importance, and the best classifier on the cotton extraction accuracy were evaluated. The results showed that the texture feature named the gray level co-occurrence matrix (GLCM) is effective for improving classification accuracy, ranking second in contribution among all studied spectral, VI, and texture features. Among the three classifiers, the RF showed higher accuracy and better stability than support vector machines (SVM) and artificial neural networks (ANN). The average overall accuracy (OA) of the classification combining multiple features was 93.36%, 7.33% higher than the average OA of the single-time spectrum, and 2.05% higher than the average OA of the multi-time spectrum. The classification accuracy after feature selection by RF can still reach 92.12%, showing high accuracy and efficiency. Combining multiple features and random forest methods may be a promising county-scale cotton classification method. Full article
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16 pages, 8923 KiB  
Article
Remote Sensing Monitoring of Grasslands Based on Adaptive Feature Fusion with Multi-Source Data
by Weitao Wang, Qin Ma, Jianxi Huang, Quanlong Feng, Yuanyuan Zhao, Hao Guo, Boan Chen, Chenxi Li and Yuxin Zhang
Remote Sens. 2022, 14(3), 750; https://doi.org/10.3390/rs14030750 - 6 Feb 2022
Cited by 3 | Viewed by 2696
Abstract
Grasslands, as an important part of terrestrial ecosystems, are facing serious threats of land degradation. Therefore, the remote monitoring of grasslands is an important tool to control degradation and protect grasslands. However, the existing methods are often disturbed by clouds and fog, which [...] Read more.
Grasslands, as an important part of terrestrial ecosystems, are facing serious threats of land degradation. Therefore, the remote monitoring of grasslands is an important tool to control degradation and protect grasslands. However, the existing methods are often disturbed by clouds and fog, which makes it difficult to achieve all-weather and all-time grassland remote sensing monitoring. Synthetic aperture radar (SAR) data can penetrate clouds, which is helpful for solving this problem. In this study, we verified the advantages of the fusion of multi-spectral (MS) and SAR data for improving classification accuracy, especially for cloud-covered areas. We also proposed an adaptive feature fusion method (the SK-like method) based on an attention mechanism, and tested two types of patch construction strategies, single-size and multi-size patches. Experiments have shown that the proposed SK-like method with single-size patches obtains the best results, with 93.12% accuracy and a 0.91 average f1-score, which is a 1.02% accuracy improvement and a 0.01 average f1-score improvement compared with the commonly used feature concatenation method. Our results show that the all-weather, all-time remote sensing monitoring of grassland is possible through the fusion of MS and SAR data with suitable feature fusion methods, which will effectively enhance the regulatory capability of grassland resources. Full article
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19 pages, 5051 KiB  
Article
Integration of a Crop Growth Model and Deep Learning Methods to Improve Satellite-Based Yield Estimation of Winter Wheat in Henan Province, China
by Yi Xie and Jianxi Huang
Remote Sens. 2021, 13(21), 4372; https://doi.org/10.3390/rs13214372 - 30 Oct 2021
Cited by 28 | Viewed by 4065
Abstract
Timely and accurate regional crop-yield estimates are crucial for guiding agronomic practices and policies to improve food security. In this study, a crop-growth model was integrated with time series of remotely sensed data through deep learning (DL) methods to improve the accuracy of [...] Read more.
Timely and accurate regional crop-yield estimates are crucial for guiding agronomic practices and policies to improve food security. In this study, a crop-growth model was integrated with time series of remotely sensed data through deep learning (DL) methods to improve the accuracy of regional wheat-yield estimations in Henan Province, China. Firstly, the time series of moderate-resolution imaging spectroradiometer (MODIS) normalized difference vegetation index (NDVI) were input into the long short-term memory network (LSTM) model to identify the wheat-growing region, which was further used to estimate wheat areas at the municipal and county levels. Then, the leaf area index (LAI) and grain-yield time series simulated by the Crop Environment REsource Synthesis for Wheat (CERES-Wheat) model were used to train and evaluate the LSTM, one-dimensional convolutional neural network (1-D CNN) and random forest (RF) models, respectively. Finally, an exponential model of the relationship between the field-measured LAI and MODIS NDVI was applied to obtain the regional LAI, which was input into the trained LSTM, 1-D CNN and RF models to estimate wheat yields within the wheat-growing region. The results showed that the linear correlations between the estimated wheat areas and the statistical areas were significant at both the municipal and county levels. The LSTM model provided more accurate estimates of wheat yields, with higher R2 values and lower root mean square error (RMSE) and mean relative error (MRE) values than the 1-D CNN and RF models. The LSTM model has an inherent advantage in capturing phenological information contained in the time series of the MODIS-derived LAI, which is important for satellite-based crop-yield estimates. Full article
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17 pages, 3901 KiB  
Article
Estimating Fractional Vegetation Cover of Row Crops from High Spatial Resolution Image
by Xu Ma, Lei Lu, Jianli Ding, Fei Zhang and Baozhong He
Remote Sens. 2021, 13(19), 3874; https://doi.org/10.3390/rs13193874 - 28 Sep 2021
Cited by 11 | Viewed by 2715
Abstract
With high spatial resolution remote sensing images being increasingly used in precision agriculture, more details of the row structure of row crops are captured in the corresponding images. This phenomenon is a challenge for the estimation of the fractional vegetation cover (FVC) of [...] Read more.
With high spatial resolution remote sensing images being increasingly used in precision agriculture, more details of the row structure of row crops are captured in the corresponding images. This phenomenon is a challenge for the estimation of the fractional vegetation cover (FVC) of row crops. Previous studies have found that there is an overestimation of FVC for the early growth stage of vegetation in the current algorithms. When the row crops are a form in the early stage of vegetation, their FVC may also have overestimation. Therefore, developing an algorithm to address this problem is necessary. This study used World-View 3 images as data sources and attempted to use the canopy reflectance model of row crops, coupling backward propagation neural networks (BPNNs) to estimate the FVC of row crops. Compared to the prevailing algorithms, i.e., empirical method, spectral mixture analysis, and continuous crop model coupling BPNNs, the results showed that the calculated accuracy of the canopy reflectance model of row crops coupling with BPNNs is the highest performing (RMSE = 0.0305). Moreover, when the structure is obvious, we found that the FVC of row crops was about 0.5–0.6, and the relationship between estimated FVC of row crops and NDVI presented a strong exponential relationship. The results reinforced the conclusion that the canopy reflectance model of row crops coupled with BPNNs is more suitable for estimating the FVC of row crops in high-resolution images. Full article
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Review

Jump to: Research

39 pages, 1897 KiB  
Review
A Review of Hybrid Approaches for Quantitative Assessment of Crop Traits Using Optical Remote Sensing: Research Trends and Future Directions
by Asmaa Abdelbaki and Thomas Udelhoven
Remote Sens. 2022, 14(15), 3515; https://doi.org/10.3390/rs14153515 - 22 Jul 2022
Cited by 13 | Viewed by 3404
Abstract
Remote sensing technology allows to provide information about biochemical and biophysical crop traits and monitor their spatiotemporal dynamics of agriculture ecosystems. Among multiple retrieval techniques, hybrid approaches have been found to provide outstanding accuracy, for instance, for the inference of leaf area index [...] Read more.
Remote sensing technology allows to provide information about biochemical and biophysical crop traits and monitor their spatiotemporal dynamics of agriculture ecosystems. Among multiple retrieval techniques, hybrid approaches have been found to provide outstanding accuracy, for instance, for the inference of leaf area index (LAI), fractional vegetation cover (fCover), and leaf and canopy chlorophyll content (LCC and CCC). The combination of radiative transfer models (RTMs) and data-driven models creates an advantage in the use of hybrid methods. Through this review paper, we aim to provide state-of-the-art hybrid retrieval schemes and theoretical frameworks. To achieve this, we reviewed and systematically analyzed publications over the past 22 years. We identified two hybrid-based parametric and hybrid-based nonparametric regression models and evaluated their performance for each variable of interest. From the results of our extensive literature survey, most research directions are now moving towards combining RTM and machine learning (ML) methods in a symbiotic manner. In particular, the development of ML will open up new ways to integrate innovative approaches such as integrating shallow or deep neural networks with RTM using remote sensing data to reduce errors in crop trait estimations and improve control of crop growth conditions in very large areas serving precision agriculture applications. Full article
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