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International Journal of Molecular Sciences, Volume 10, Issue 5

2009 May - 28 articles

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Articles (28)

  • Article
  • Open Access
21 Citations
12,130 Views
29 Pages

22 May 2009

In this work, attention is mainly focused on those properties of water which are essentially changed in the physiological temperature range of warm-blooded organisms. Studying in detail the half-width of the diffusion peak in the quasi-elastic incohe...

  • Article
  • Open Access
11 Citations
14,872 Views
19 Pages

Relative Stabilities of Conserved and Non-Conserved Structures in the OB-Fold Superfamily

  • Kaitlyn M. Guardino,
  • Sarah R. Sheftic,
  • Robert E. Slattery and
  • Andrei T. Alexandrescu

22 May 2009

The OB-fold is a diverse structure superfamily based on a β-barrel motif that is often supplemented with additional non-conserved secondary structures. Previous deletion mutagenesis and NMR hydrogen exchange studies of three OB-fold proteins showed t...

  • Article
  • Open Access
9 Citations
11,279 Views
9 Pages

Analysis of Intestinal Injuries Induced by Ricin in Vitro Using SPR Technology and MS Identification

  • Linna Liu,
  • Hongwei Gao,
  • Jiping Li,
  • Ying Dong,
  • Ning Liu,
  • Jiayu Wan,
  • Wensen Liu,
  • Yucheng Sun and
  • Ming Xu

22 May 2009

The present study found that ricin toxicity did not only manifest itself as inhibition of protein synthesis, but also induced apoptosis of immune cells and played an extremely significant role in intestinal injury. In this report, we describe a novel...

  • Article
  • Open Access
19 Citations
13,631 Views
19 Pages

Microscopic Investigation of Reversible Nanoscale Surface Size Dependent Protein Conjugation

  • Kazushige Yokoyama,
  • Hyunah Cho,
  • Sean P. Cullen,
  • Matthew Kowalik,
  • Nicole M. Briglio,
  • Harold J. Hoops,
  • Zhouying Zhao and
  • Michael A. Carpenter

20 May 2009

1-40 coated 20 nm gold colloidal nanoparticles exhibit a reversible color change as pH is externally altered between pH 4 and 10. This reversible process may contain important information on the initial reversible step reported for the fibrillogene...

  • Article
  • Open Access
152 Citations
20,365 Views
16 Pages

Hypoglycaemic and Hypolipidaemic Effects of Withania somnifera Root and Leaf Extracts on Alloxan-Induced Diabetic Rats

  • Rajangam Udayakumar,
  • Sampath Kasthurirengan,
  • Thankaraj Salammal Mariashibu,
  • Manoharan Rajesh,
  • Vasudevan Ramesh Anbazhagan,
  • Sei Chang Kim,
  • Andy Ganapathi and
  • Chang Won Choi

20 May 2009

Withania somnifera is an important medicinal plant, which is used in traditional medicine to cure many diseases.Flavonoids were determined in the extracts of W. somnifera root (WSREt) and leaf (WSLEt). The amounts of total flavonoids found in WSREt a...

  • Review
  • Open Access
72 Citations
23,073 Views
52 Pages

Mitochondria and Energetic Depression in Cell Pathophysiology

  • Enn Seppet,
  • Marju Gruno,
  • Ants Peetsalu,
  • Zemfira Gizatullina,
  • Huu Phuc Nguyen,
  • Stefan Vielhaber,
  • Manfred H.P. Wussling,
  • Sonata Trumbeckaite,
  • Odeta Arandarcikaite and
  • Frank N. Gellerich
  • + 5 authors

19 May 2009

Mitochondrial dysfunction is a hallmark of almost all diseases. Acquired or inherited mutations of the mitochondrial genome DNA may give rise to mitochondrial diseases. Another class of disorders, in which mitochondrial impairments are initiated by e...

  • Review
  • Open Access
95 Citations
17,693 Views
32 Pages

19 May 2009

The formation of complex organic molecules in a reactor filled with gaseous mixtures possibly reproducing the primitive terrestrial atmosphere and ocean demonstrated more than 50 years ago that inorganic synthesis of prebiotic molecules is possible,...

  • Article
  • Open Access
13 Citations
11,685 Views
12 Pages

A Novel Method for the Preparation of Retinoic Acid-Loaded Nanoparticles

  • Cesare Errico,
  • Matteo Gazzarri and
  • Federica Chiellini

19 May 2009

The goal of present work was to investigate the use of bioerodible polymeric nanoparticles as carriers of retinoic acid (RA), which is known to induce differentiation of several cell lines into neurons. A novel method, named “Colloidal-Coating”, has...

  • Review
  • Open Access
4 Citations
14,162 Views
49 Pages

18 May 2009

This review is variously a presentation, reflection, synthesis and report with reference to more recent developments of an article – in a journal which has ceased publication – entitled “Some Electrode Theorems with Experimental Corroboration, Inclus...

  • Article
  • Open Access
4 Citations
10,854 Views
21 Pages

15 May 2009

We demonstrate that the temperature-dependent phase behaviors of parallel and perpendicular cylinder-forming block copolymers are governed by domain-domain segregation forces inherently present in block copolymer material itself. With increasing temp...

  • Article
  • Open Access
1 Citations
10,878 Views
13 Pages

15 May 2009

Identification of protein-protein interface residues is crucial for structural biology. This paper proposes a covering algorithm for predicting protein-protein interface residues with features including protein sequence profile and residue accessible...

  • Article
  • Open Access
13 Citations
12,663 Views
15 Pages

14 May 2009

The Particle Swarm Optimization (PSO) and Support Vector Machines (SVMs) approaches are used for predicting the thermodynamic parameters for the 1:1 inclusion complexation of chiral guests with β-cyclodextrin. A PSO is adopted for descriptor selectio...

  • Article
  • Open Access
67 Citations
13,120 Views
14 Pages

14 May 2009

Quantum dots (QDs) are useful novel luminescent markers, but their embryonic toxicity is yet to be fully established, particularly in oocyte maturation and sperm fertilization. Earlier experiments by our group show that CdSe-core QDs have cytotoxic e...

  • Article
  • Open Access
33 Citations
12,967 Views
10 Pages

14 May 2009

Nanofiber scaffolds formed by self-assembling peptide RADA16-I have been used for the study of cell proliferation to mimic an extracellular matrix. In this study, we investigated the effect of RADA16-I on the growth of human leukemia cells in vitro a...

  • Article
  • Open Access
8 Citations
11,369 Views
12 Pages

Stereodynamics Study of the Reaction of O(3P) with CH4 (v = 0 ,j = 0)

  • Yufang Liu,
  • Yali Gao,
  • Hongsheng Zhai,
  • Deheng Shi and
  • Jinfeng Sun

14 May 2009

A newLondon-Eyring-Polanyi-Sato (LEPS) potential energy surface (PES) is used in the O + CH4 → OH + CH3 reaction via the quasiclassical trajectory method (QCT). Comparing with the experiments and the former ab initio calculations, the new LEPS PES de...

  • Communication
  • Open Access
21 Citations
15,687 Views
11 Pages

14 May 2009

Recently, artificial microRNA (amiRNA) has become a promising RNA interference (RNAi) technology. Here, we describe a flexible and reliable method for constructing both single- and multi-amiRNA expression vectors. Two universal primers, together with...

  • Article
  • Open Access
17 Citations
13,614 Views
23 Pages

A Possible Mechanism for Evading Temperature Quantum Decoherence in Living Matter by Feshbach Resonance

  • Nicola Poccia,
  • Alessandro Ricci,
  • Davide Innocenti and
  • Antonio Bianconi

13 May 2009

A new possible scenario for the origin of the molecular collective behaviour associated with the emergence of living matter is presented. We propose that the transition from a non-living to a living cell could be mapped to a quantum transition to a c...

  • Review
  • Open Access
26 Citations
16,604 Views
18 Pages

12 May 2009

The folding of protein molecules in the GroEL inner cavity under the co-chaperonin GroES lid is widely accepted as a crucial event of GroEL-assisted protein folding. This review is focused on the data showing that GroEL-assisted protein folding may p...

  • Article
  • Open Access
3 Citations
9,861 Views
12 Pages

Rolly Protein (ROLP)-Epb4.1/3: A Potential Protein-Protein Interaction Relevant for the Maintenance of Cell Adhesion

  • Manuele Castelnuovo,
  • Massimiliano Monticone,
  • Sara Massone,
  • Irene Vassallo,
  • Federico Tortelli,
  • Ranieri Cancedda and
  • Aldo Pagano

12 May 2009

We recently described Rolly Protein (ROLP), a small protein synthesized by substrate-adherent cells in a broad range of tissues. In a first set of experiments performed taking advantage of bone forming tibial cartilage as an experimental model we sho...

  • Article
  • Open Access
17 Citations
10,573 Views
12 Pages

6 May 2009

This paper shows that the steadystate of a system of conjugated reactions, which are characterized by disproportionation of entropy and proceed in the domain of linear interactions, is an attractor of ordering. Such systems are primed to produce orde...

  • Article
  • Open Access
23 Citations
13,621 Views
10 Pages

Effects of Hydroxylpropyl-β-Cyclodextrin on in Vitro Insulin Stability

  • Liefeng Zhang,
  • Wenjie Zhu,
  • Lingling Song,
  • Yifan Wang,
  • Hui Jiang,
  • Suyun Xian and
  • Yong Ren

6 May 2009

The objective of this study was to elucidate the effects of hydroxylpropyl-β-cyclodextrin (HP-β-CD) on the in vitro stability of insulin. It was found that HP-β-CD had positive effects on the stability of insulin in acid and base and under high tempe...

  • Article
  • Open Access
18 Citations
10,613 Views
13 Pages

6 May 2009

Most of our knowledge regarding the process of protein import into mitochondria has come from research employing Saccharomyces cerevisiae as a model system. Recently, several mammalian homologues of the mitochondrial motor proteins were identified. O...

  • Article
  • Open Access
4 Citations
13,100 Views
9 Pages

4 May 2009

The tumor necrosis factor-alpha (TNF-α) cytokine receptor system modulates apoptosis in many cell types, so we have investigated the role of sTNFR1 in bacterial lipopolysaccharide (LPS)-induced cell death in cultured human decidual stromal cells, hyp...

  • Review
  • Open Access
206 Citations
18,809 Views
21 Pages

29 April 2009

This paper gives an overview of the mathematical methods currently used in quantitative structure-activity/property relationship (QASR/QSPR) studies. Recently, the mathematical methods applied to the regression of QASR/QSPR models are developing very...

  • Article
  • Open Access
22 Citations
11,507 Views
11 Pages

Localization of D-β-Aspartyl Residue-Containing Proteins in Various Tissues

  • Ryota Motoie,
  • Noriko Fujii,
  • Shigeru Tsunoda,
  • Kenji Nagata,
  • Tadashi Shimo-oka,
  • Tadatoshi Kinouchi,
  • Norihiko Fujii,
  • Takeshi Saito and
  • Koji Ono

29 April 2009

Prior to the emergence of life, it is believed that only L-amino acids were selected for formation of protein and that D-amino acids were eliminated on the primitive Earth. Whilst homochirality is essential for life, the occurrence of proteins contai...

  • Article
  • Open Access
14 Citations
11,281 Views
11 Pages

28 April 2009

Jcl:WistarTGN(ARGHGEN)1Nts rat (Mini rat) is a growth hormone (GH)-deficient transgenic rat. The hair cycle in the dorsal skin of male Mini rats enters a long-lasting telogen phase after eights weeks of age, but depilation can induce a transient hair...

  • Article
  • Open Access
8 Citations
9,159 Views
8 Pages

Glycosylation of Fluorophenols by Plant Cell Cultures

  • Kei Shimoda,
  • Naoji Kubota,
  • Yoko Kondo,
  • Daisuke Sato and
  • Hiroki Hamada

27 April 2009

Fluoroaromatic compounds are used as agrochemicals and released into environment as pollutants. Glycosylation of 2-, 3-, and 4-fluorophenols using plant cell cultures of Nicotiana tabacum was investigated to elucidate their potential to metabolize th...

  • Review
  • Open Access
19 Citations
14,794 Views
17 Pages

Self-Assembly of Optical Molecules with Supramolecular Concepts

  • Ken Okamoto,
  • Parayalil Chithra,
  • Gary J. Richards,
  • Jonathan P. Hill and
  • Katsuhiko Ariga

27 April 2009

Fabrication of nano-sized objects is one of the most important issues in nanoscience and nanotechnology. Soft nanomaterials with flexible properties have been given much attention and can be obtained through bottom-up processing from functional molec...

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Int. J. Mol. Sci. - ISSN 1422-0067