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Viruses, Volume 7, Issue 10

2015 October - 31 articles

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Articles (31)

  • Article
  • Open Access
44 Citations
7,393 Views
13 Pages

Exposure to West Nile Virus Increases Bacterial Diversity and Immune Gene Expression in Culex pipiens

  • Steven D. Zink,
  • Greta A. Van Slyke,
  • Michael J. Palumbo,
  • Laura D. Kramer and
  • Alexander T. Ciota

27 October 2015

Complex interactions between microbial residents of mosquitoes and arboviruses are likely to influence many aspects of vectorial capacity and could potentially have profound effects on patterns of arbovirus transmission. Such interactions have not be...

  • Article
  • Open Access
18 Citations
7,000 Views
11 Pages

Identification and Application of Neutralizing Epitopes of Human Adenovirus Type 55 Hexon Protein

  • Xingui Tian,
  • Qiang Ma,
  • Zaixue Jiang,
  • Junfeng Huang,
  • Qian Liu,
  • Xiaomei Lu,
  • Qingming Luo and
  • Rong Zhou

27 October 2015

Human adenovirus type 55 (HAdV55) is a newly identified re-emergent acute respiratory disease (ARD) pathogen with a proposed recombination of hexon gene between HAdV11 and HAdV14 strains. The identification of the neutralizing epitopes is important f...

  • Article
  • Open Access
37 Citations
9,229 Views
18 Pages

Vector-Enabled Metagenomic (VEM) Surveys Using Whiteflies (Aleyrodidae) Reveal Novel Begomovirus Species in the New and OldWorlds

  • Karyna Rosario,
  • Yee Mey Seah,
  • Christian Marr,
  • Arvind Varsani,
  • Simona Kraberger,
  • Daisy Stainton,
  • Enrique Moriones,
  • Jane E. Polston,
  • Siobain Duffy and
  • Mya Breitbart

26 October 2015

Whitefly-transmitted viruses belonging to the genus Begomovirus (family Geminiviridae) represent a substantial threat to agricultural food production. The rapid evolutionary potential of these single-stranded DNA viruses combined with the polyphagous...

  • Article
  • Open Access
4 Citations
6,253 Views
16 Pages

Nucleobase but not Sugar Fidelity is Maintained in the Sabin I RNA-Dependent RNA Polymerase

  • Xinran Liu,
  • Derek M. Musser,
  • Cheri A. Lee,
  • Xiaorong Yang,
  • Jamie J. Arnold,
  • Craig E. Cameron and
  • David D. Boehr

26 October 2015

The Sabin I poliovirus live, attenuated vaccine strain encodes for four amino acid changes (i.e., D53N, Y73H, K250E, and T362I) in the RNA-dependent RNA polymerase (RdRp). We have previously shown that the T362I substitution leads to a lower fidelity...

  • Article
  • Open Access
18 Citations
7,767 Views
16 Pages

Requirements within the Ebola Viral Glycoprotein for Tetherin Antagonism

  • Nathan H. Vande Burgt,
  • Rachel L. Kaletsky and
  • Paul Bates

26 October 2015

Tetherin is an interferon-induced, intrinsic cellular response factor that blocks release of numerous viruses, including Ebola virus, from infected cells. As with many viruses targeted by host factors, Ebola virus employs a tetherin antagonist, the v...

  • Editorial
  • Open Access
26 Citations
9,917 Views
6 Pages

Special Issue: Honey Bee Viruses

  • Sebastian Gisder and
  • Elke Genersch

26 October 2015

Pollination of flowering plants is an important ecosystem service provided by wild insect pollinators and managed honey bees. Hence, losses and declines of pollinating insect species threaten human food security and are of major concern not only for...

  • Addendum
  • Open Access
2 Citations
4,533 Views
1 Page

Addendum: Kong, M.Y.; Whitley, R.J.; Peng, N.; Oster, R.; Schoeb, T.R.; Sullender, W.; Ambalavanan, N.; Clancy, J.P.; Gaggar, A.; Blalock J.E. Matrix Metalloproteinase-9 Mediates RSV Infection in Vitro and in Vivo. Viruses 2015, 30, 7, 4230–4253

  • Michele Y. F. Kong,
  • Richard J. Whitley,
  • Ning Peng,
  • Robert Oster,
  • Trenton R. Schoeb,
  • Wayne Sullender,
  • Namasivayam Ambalavanan,
  • John Paul Clancy,
  • Amit Gaggar and
  • J. Edwin Blalock

26 October 2015

The authors wish to make the following addition to their paper [1]. [...]

  • Article
  • Open Access
4 Citations
7,563 Views
9 Pages

Entry of Oncolytic Herpes Simplex Virus into Human Squamous Cell Carcinoma Cells by Ultrasound

  • Shusuke Okunaga,
  • Ayako Takasu,
  • Noritoshi Meshii,
  • Tomoaki Imai,
  • Masakagu Hamada,
  • Soichi Iwai and
  • Yoshiaki Yura

26 October 2015

Low-intensity ultrasound is a useful method to introduce materials into cells due to the transient formation of micropores, called sonoporations, on the cell membrane. Whether oncolytic herpes simplex virus type 1 (HSV-1) can be introduced into oral...

  • Review
  • Open Access
60 Citations
14,893 Views
19 Pages

23 October 2015

Ebola- and marburgviruses are highly pathogenic filoviruses and causative agents of viral hemorrhagic fever. Filovirus disease is characterized by a dysregulated immune response, severe organ damage, and coagulation abnormalities. This includes modul...

  • Review
  • Open Access
29 Citations
9,164 Views
17 Pages

Identifying Recent HIV Infections: From Serological Assays to Genomics

  • Sikhulile Moyo,
  • Eduan Wilkinson,
  • Vladimir Novitsky,
  • Alain Vandormael,
  • Simani Gaseitsiwe,
  • Max Essex,
  • Susan Engelbrecht and
  • Tulio De Oliveira

23 October 2015

In this paper, we review serological and molecular based methods to identify HIV infection recency. The accurate identification of recent HIV infection continues to be an important research area and has implications for HIV prevention and treatment i...

  • Article
  • Open Access
72 Citations
9,425 Views
14 Pages

Comparative Genomic Analysis of Classical and Variant Virulent Parental/Attenuated Strains of Porcine Epidemic Diarrhea Virus

  • Fangzhou Chen,
  • Yinxing Zhu,
  • Meizhou Wu,
  • Xugang Ku,
  • Shiyi Ye,
  • Zhonghua Li,
  • Xiaozhen Guo and
  • Qigai He

23 October 2015

Since 2010, the variant porcine epidemic diarrhea virus (PEDV) has been the etiological agent responsible for the outbreak of porcine epidemic diarrhea (PED) worldwide. In this study, a variant PEDV strain YN1 was isolated, serially propagated on the...

  • Article
  • Open Access
8 Citations
7,195 Views
14 Pages

Porcine Reproductive and Respiratory Syndrome Virus (PRRSV) Inhibits RNA-Mediated Gene Silencing by Targeting Ago-2

  • Jing Chen,
  • Xibao Shi,
  • Xiaozhuan Zhang,
  • Li Wang,
  • Jun Luo,
  • Guangxu Xing,
  • Ruiguang Deng,
  • Hong Yang,
  • Jinting Li and
  • Gaiping Zhang
  • + 1 author

23 October 2015

Porcine reproductive and respiratory syndrome virus (PRRSV) infection strongly modulates the host’s immune response. The RNA silencing pathway is an intracellular innate response to viral infections. However, it is unknown whether PRRSV interacts wit...

  • Article
  • Open Access
23 Citations
9,517 Views
13 Pages

Complete Genome and Phylogeny of Puumala Hantavirus Isolates Circulating in France

  • Guillaume Castel,
  • Mathilde Couteaudier,
  • Frank Sauvage,
  • Jean-Baptiste Pons,
  • Séverine Murri,
  • Angelina Plyusnina,
  • Dominique Pontier,
  • Jean-François Cosson,
  • Alexander Plyusnin and
  • Noël Tordo
  • + 1 author

22 October 2015

Puumala virus (PUUV) is the agent of nephropathia epidemica (NE), a mild form of hemorrhagic fever with renal syndrome (HFRS) in Europe. NE incidence presents a high spatial variation throughout France, while the geographical distribution of the wild...

  • Article
  • Open Access
27 Citations
8,992 Views
33 Pages

Longitudinal Antigenic Sequences and Sites from Intra-Host Evolution (LASSIE) Identifies Immune-Selected HIV Variants

  • Peter Hraber,
  • Bette Korber,
  • Kshitij Wagh,
  • Elena E. Giorgi,
  • Tanmoy Bhattacharya,
  • S. Gnanakaran,
  • Alan S. Lapedes,
  • Gerald H. Learn,
  • Edward F. Kreider and
  • Barton F. Haynes
  • + 9 authors

21 October 2015

Within-host genetic sequencing from samples collected over time provides a dynamic view of how viruses evade host immunity. Immune-driven mutations might stimulate neutralization breadth by selecting antibodies adapted to cycles of immune escape that...

  • Review
  • Open Access
124 Citations
14,806 Views
15 Pages

Perspective of Use of Antiviral Peptides against Influenza Virus

  • Sylvie Skalickova,
  • Zbynek Heger,
  • Ludmila Krejcova,
  • Vladimir Pekarik,
  • Karel Bastl,
  • Jozef Janda,
  • Frantisek Kostolansky,
  • Eva Vareckova,
  • Ondrej Zitka and
  • Rene Kizek
  • + 1 author

20 October 2015

The threat of a worldwide influenza pandemic has greatly increased over the past decade with the emergence of highly virulent avian influenza strains. The increased frequency of drug-resistant influenza strains against currently available antiviral d...

  • Article
  • Open Access
16 Citations
9,457 Views
22 Pages

19 October 2015

The origin and evolution of viruses is a subject of ongoing debate. In this study, we provide a full account of the evolutionary relationships between proteins of significant sequence and structural similarity found in viruses that belong to differen...

  • Review
  • Open Access
105 Citations
20,119 Views
18 Pages

19 October 2015

Dengue is an arthropod-borne viral disease caused by four antigenically different serotypes of dengue virus. This disease is considered as a major public health concern around the world. Currently, there is no licensed vaccine or antiviral drug avail...

  • Article
  • Open Access
12 Citations
7,515 Views
14 Pages

16 October 2015

Type-I interferon (IFN-I) production is an early response to viral infection and pathogenic viruses have evolved multiple strategies to evade this cellular defense. Some viruses can establish and maintain persistent infections by altering the IFN-I s...

  • Review
  • Open Access
24 Citations
8,021 Views
13 Pages

Emerging Roles of Viroporins Encoded by DNA Viruses: Novel Targets for Antivirals?

  • Jamie Royle,
  • Samuel John Dobson,
  • Marietta Müller and
  • Andrew Macdonald

16 October 2015

Studies have highlighted the essential nature of a group of small, highly hydrophobic, membrane embedded, channel-forming proteins in the life cycles of a growing number of RNA viruses. These viroporins mediate the flow of ions and a range of solutes...

  • Article
  • Open Access
23 Citations
8,029 Views
18 Pages

15 October 2015

Various natural and synthetic polyanionic polymers with different chemical structures are known to exhibit potent antiviral activity in vitro toward a variety of enveloped viruses and may be considered as promising therapeutic agents. A water-soluble...

  • Communication
  • Open Access
40 Citations
8,260 Views
9 Pages

Multi-Modal Imaging with a Toolbox of Influenza AReporter Viruses

  • Vy Tran,
  • Daniel S. Poole,
  • Justin J. Jeffery,
  • Timothy P. Sheahan,
  • Donald Creech,
  • Aleksey Yevtodiyenko,
  • Andrew J. Peat,
  • Kevin P. Francis,
  • Shihyun You and
  • Andrew Mehle

13 October 2015

Reporter viruses are useful probes for studying multiple stages of the viral life cycle. Here we describe an expanded toolbox of fluorescent and bioluminescent influenza A reporter viruses. The enhanced utility of these tools enabled kinetic studies...

  • Review
  • Open Access
34 Citations
10,934 Views
15 Pages

13 October 2015

Sustained virological response (SVR) rates have increased dramatically following the approval of direct acting antiviral (DAA) therapies. While individual DAAs have a low barrier to resistance, most patients can be successfully treated using DAA comb...

  • Review
  • Open Access
41 Citations
11,255 Views
17 Pages

Phosphorylation of Single Stranded RNA Virus Proteins and Potential for Novel Therapeutic Strategies

  • Forrest Keck,
  • Pouya Ataey,
  • Moushimi Amaya,
  • Charles Bailey and
  • Aarthi Narayanan

12 October 2015

Post translational modification of proteins is a critical requirement that regulates function. Among the diverse kinds of protein post translational modifications, phosphorylation plays essential roles in protein folding, protein:protein interactions...

  • Review
  • Open Access
123 Citations
23,603 Views
31 Pages

Modeling Influenza Virus Infection: A Roadmap for Influenza Research

  • Alessandro Boianelli,
  • Van Kinh Nguyen,
  • Thomas Ebensen,
  • Kai Schulze,
  • Esther Wilk,
  • Niharika Sharma,
  • Sabine Stegemann-Koniszewski,
  • Dunja Bruder,
  • Franklin R. Toapanta and
  • Esteban A. Hernandez-Vargas
  • + 2 authors

12 October 2015

Influenza A virus (IAV) infection represents a global threat causing seasonal outbreaks and pandemics. Additionally, secondary bacterial infections, caused mainly by Streptococcus pneumoniae, are one of the main complications and responsible for the...

  • Review
  • Open Access
7 Citations
8,117 Views
14 Pages

12 October 2015

Replication of the poliovirus genome is localized to cytoplasmic replication factories that are fashioned out of a mixture of viral proteins, scavenged cellular components, and new components that are synthesized within the cell due to viral manipula...

  • Article
  • Open Access
22 Citations
8,787 Views
14 Pages

HPV16 E6 Controls the Gap Junction Protein Cx43 in Cervical Tumour Cells

  • Peng Sun,
  • Li Dong,
  • Alasdair I. MacDonald,
  • Shahrzad Akbari,
  • Michael Edward,
  • Malcolm B. Hodgins,
  • Scott R. Johnstone and
  • Sheila V. Graham

5 October 2015

Human papillomavirus type 16 (HPV16) causes a range of cancers including cervical and head and neck cancers. HPV E6 oncoprotein binds the cell polarity regulator hDlg (human homologue of Drosophila Discs Large). Previously we showed in vitro, and now...

  • Article
  • Open Access
66 Citations
11,706 Views
18 Pages

Isolation and Genome Characterization of the Virulent Staphylococcus aureus Bacteriophage SA97

  • Yoonjee Chang,
  • Hakdong Shin,
  • Ju-Hoon Lee,
  • Chul Jong Park,
  • Soon-Young Paik and
  • Sangryeol Ryu

1 October 2015

A novel bacteriophage that infects S. aureus, SA97, was isolated and characterized. The phage SA97 belongs to the Siphoviridae family, and the cell wall teichoic acid (WTA) was found to be a host receptor of the phage SA97. Genome analysis revealed t...

  • Review
  • Open Access
24 Citations
8,466 Views
19 Pages

Filoviruses: One of These Things is (not) Like the Other

  • Scott M. Anthony and
  • Steven B. Bradfute

29 September 2015

The family Filoviridae contains several of the most deadly pathogens known to date and the current Ebola virus disease (EVD) outbreak in Western Africa, due to Ebola virus (EBOV) infection, highlights the need for active and broad research into filov...

  • Article
  • Open Access
15 Citations
10,864 Views
15 Pages

Differentially-Expressed Pseudogenes in HIV-1 Infection

  • Aditi Gupta,
  • C. Titus Brown,
  • Yong-Hui Zheng and
  • Christoph Adami

29 September 2015

Not all pseudogenes are transcriptionally silent as previously thought. Pseudogene transcripts, although not translated, contribute to the non-coding RNA pool of the cell that regulates the expression of other genes. Pseudogene transcripts can also d...

  • Review
  • Open Access
105 Citations
14,587 Views
19 Pages

Inhibitors of the Hepatitis C Virus Polymerase; Mode of Action and Resistance

  • Auda A. Eltahla,
  • Fabio Luciani,
  • Peter A. White,
  • Andrew R. Lloyd and
  • Rowena A. Bull

29 September 2015

The hepatitis C virus (HCV) is a pandemic human pathogen posing a substantial health and economic burden in both developing and developed countries. Controlling the spread of HCV through behavioural prevention strategies has met with limited success...

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Viruses - ISSN 1999-4915