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Metabolites, Volume 9, Issue 1

2019 January - 18 articles

Cover Story: Breast cancer patients undergoing combination chemotherapy with palbociclib and fulvestrant have increased progression-free survival versus treatment with palbociclib alone, however the exact mechanisms for this increase in survival are not known. In this paper, we applied an innovative multi-omics approach to decipher metabolic pathways affected by single (versus combination) dosing of palbociclib and fulvestrant in estrogen receptor-positive breast cancer cells. Key metabolites and genes were correlated within metabolic pathways and shown to be involved in the drugs’ synergism. Notably, fulvestrant was shown to independently attenuate the pentose phosphate pathway and coenzyme production. This is the first study to merge omic datasets to investigate combined therapy on breast cancer cell metabolism. View this paper.
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Articles (18)

  • Article
  • Open Access
32 Citations
7,498 Views
13 Pages

A Metabolomic Study of the Variability of the Chemical Composition of Commonly Consumed Coffee Brews

  • Joseph A. Rothwell,
  • Erikka Loftfield,
  • Roland Wedekind,
  • Neal Freedman,
  • Callie Kambanis,
  • Augustin Scalbert and
  • Rashmi Sinha

18 January 2019

Coffee drinking has been associated with a lower risk of certain chronic diseases and overall mortality. Its effects on disease risk may vary according to the type of coffee brew consumed and its chemical composition. We characterized variations in t...

  • Article
  • Open Access
21 Citations
5,411 Views
11 Pages

GC-MS Metabolomics Reveals Distinct Profiles of Low- and High-Grade Bladder Cancer Cultured Cells

  • Daniela Rodrigues,
  • Joana Pinto,
  • Ana Margarida Araújo,
  • Carmen Jerónimo,
  • Rui Henrique,
  • Maria de Lourdes Bastos,
  • Paula Guedes de Pinho and
  • Márcia Carvalho

18 January 2019

Previous studies have shown that metabolomics can be a useful tool to better understand the mechanisms of carcinogenesis; however, alterations in biochemical pathways that lead to bladder cancer (BC) development have hitherto not been fully investiga...

  • Brief Report
  • Open Access
7 Citations
3,955 Views
11 Pages

1D “Spikelet” Projections from Heteronuclear 2D NMR Data—Permitting 1D Chemometrics While Preserving 2D Dispersion

  • Maryam Tabatabaei Anaraki,
  • Wolfgang Bermel,
  • Rudraksha Dutta Majumdar,
  • Ronald Soong,
  • Myrna Simpson,
  • Martine Monnette and
  • André J. Simpson

16 January 2019

Nuclear magnetic resonance (NMR) spectroscopy is a powerful tool for the non-targeted metabolomics of intact biofluids and even living organisms. However, spectral overlap can limit the information that can be obtained from 1D 1H NMR. For example, ma...

  • Article
  • Open Access
10 Citations
3,873 Views
7 Pages

Univariate Statistical Analysis as a Guide to 1H-NMR Spectra Signal Assignment by Visual Inspection

  • Chenglin Zhu,
  • Beatrice Vitali,
  • Gilbert Donders,
  • Carola Parolin,
  • Yan Li and
  • Luca Laghi

15 January 2019

In Proton Nuclear Magnetic Resonance (1H-NMR) spectroscopy, the signals assignment procedure is normally conducted by visual inspection of the spectra, by taking advantage of the innate predisposition of human eye for pattern recognition. In the case...

  • Article
  • Open Access
40 Citations
4,994 Views
10 Pages

Serum Amino Acids in Association with Prevalent and Incident Type 2 Diabetes in A Chinese Population

  • Yonghai Lu,
  • Yeli Wang,
  • Xu Liang,
  • Li Zou,
  • Choon Nam Ong,
  • Jian-Min Yuan,
  • Woon-Puay Koh and
  • An Pan

14 January 2019

We aimed to simultaneously examine the associations of both essential and non-essential amino acids with both prevalent and incident type 2 diabetes in a Chinese population. A case-control study was nested within the Singapore Chinese Health Study. P...

  • Article
  • Open Access
67 Citations
7,080 Views
16 Pages

Direct Infusion Based Metabolomics Identifies Metabolic Disease in Patients’ Dried Blood Spots and Plasma

  • Hanneke A. Haijes,
  • Marcel Willemsen,
  • Maria Van der Ham,
  • Johan Gerrits,
  • Mia L. Pras-Raves,
  • Hubertus C. M. T. Prinsen,
  • Peter M. Van Hasselt,
  • Monique G. M. De Sain-van der Velden,
  • Nanda M. Verhoeven-Duif and
  • Judith J. M. Jans

11 January 2019

In metabolic diagnostics, there is an emerging need for a comprehensive test to acquire a complete view of metabolite status. Here, we describe a non-quantitative direct-infusion high-resolution mass spectrometry (DI-HRMS) based metabolomics method a...

  • Article
  • Open Access
11 Citations
4,931 Views
15 Pages

Rapid Cerebral Metabolic Shift during Neonatal Sepsis Is Attenuated by Enteral Colostrum Supplementation in Preterm Pigs

  • Masoumeh Alinaghi,
  • Ping-Ping Jiang,
  • Anders Brunse,
  • Per Torp Sangild and
  • Hanne Christine Bertram

11 January 2019

Sepsis, the clinical manifestation of serious infection, may disturb normal brain development, especially in preterm infants with an immature brain. We hypothesized that neonatal sepsis induces systemic metabolic alterations that rapidly affect metab...

  • Article
  • Open Access
15 Citations
5,425 Views
13 Pages

Assessment of l-Asparaginase Pharmacodynamics in Mouse Models of Cancer

  • Thomas D. Horvath,
  • Wai Kin Chan,
  • Michael A. Pontikos,
  • Leona A. Martin,
  • Di Du,
  • Lin Tan,
  • Marina Konopleva,
  • John N. Weinstein and
  • Philip L. Lorenzi

9 January 2019

l-asparaginase (ASNase) is a metabolism-targeted anti-neoplastic agent used to treat acute lymphoblastic leukemia (ALL). ASNase’s anticancer activity results from the enzymatic depletion of asparagine (Asn) and glutamine (Gln), which are conver...

  • Article
  • Open Access
11 Citations
8,105 Views
15 Pages

Palbociclib and Fulvestrant Act in Synergy to Modulate Central Carbon Metabolism in Breast Cancer Cells

  • Benedikt Warth,
  • Amelia Palermo,
  • Nicholas J.W. Rattray,
  • Nathan V. Lee,
  • Zhou Zhu,
  • Linh T. Hoang,
  • Yuping Cai,
  • Anthony Mazurek,
  • Stephen Dann and
  • Caroline H. Johnson
  • + 4 authors

The aims of this study were to determine whether combination chemotherapeutics exhibit a synergistic effect on breast cancer cell metabolism. Palbociclib, is a selective inhibitor of cyclin-dependent kinases 4 and 6, and when patients are treated in...

  • Article
  • Open Access
54 Citations
6,688 Views
23 Pages

Untargeted Metabolomics Reveal Defensome-Related Metabolic Reprogramming in Sorghum bicolor against Infection by Burkholderia andropogonis

  • Charity R. Mareya,
  • Fidele Tugizimana,
  • Lizelle A. Piater,
  • Ntakadzeni E. Madala,
  • Paul A. Steenkamp and
  • Ian A. Dubery

Burkholderia andropogonis is the causal agent of bacterial leaf stripe, one of the three major bacterial diseases affecting Sorghum bicolor. However, the biochemical aspects of the pathophysiological host responses are not well understood. An untarge...

  • Article
  • Open Access
13 Citations
4,973 Views
11 Pages

Pyrexia is considered as a part of host’s defense response to the invasion of microorganisms or inanimate matter recognized as pathogenic or alien, which frequently occurs in children. Jinxin oral liquid (JXOL) is a traditional Chinese medicine...

  • Article
  • Open Access
12 Citations
5,738 Views
15 Pages

31 December 2018

Obesity is a complex disease, shaped by both genetic and environmental factors such as diet. In this study, we use untargeted metabolomics and Drosophila melanogaster to model how diet and genotype shape the metabolome of obese phenotypes. We used 16...

  • Review
  • Open Access
55 Citations
10,780 Views
36 Pages

Metabolomics and Age-Related Macular Degeneration

  • Connor N. Brown,
  • Brian D. Green,
  • Richard B. Thompson,
  • Anneke I. Den Hollander,
  • Imre Lengyel and
  • On behalf of the EYE-RISK consortium

27 December 2018

Age-related macular degeneration (AMD) leads to irreversible visual loss, therefore, early intervention is desirable, but due to its multifactorial nature, diagnosis of early disease might be challenging. Identification of early markers for disease d...

  • Article
  • Open Access
32 Citations
8,698 Views
15 Pages

Annotating Nontargeted LC-HRMS/MS Data with Two Complementary Tandem Mass Spectral Libraries

  • Herbert Oberacher,
  • Vera Reinstadler,
  • Marco Kreidl,
  • Michael A. Stravs,
  • Juliane Hollender and
  • Emma L. Schymanski

23 December 2018

Tandem mass spectral databases are indispensable for fast and reliable compound identification in nontargeted analysis with liquid chromatography–high resolution tandem mass spectrometry (LC-HRMS/MS), which is applied to a wide range of scienti...

  • Article
  • Open Access
42 Citations
6,419 Views
11 Pages

21 December 2018

To evaluate the taste of ordinary muscle from white-fleshed fish, we used GC-MS metabolomic analysis to characterise the compounds therein, and correlated the obtained data with taste measurements from an electronic tongue. Prediction models using or...

  • Article
  • Open Access
88 Citations
6,939 Views
18 Pages

21 December 2018

Distilled liquors are important products, both culturally and economically. Chemically, as a complex mixture, distilled liquor comprises various chemical compounds in addition to ethanol. However, the chemical components of distilled liquors are stil...

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Metabolites - ISSN 2218-1989