Exploring Genetics by Environment Interactions in Some Rice Genotypes across Varied Environmental Conditions
Abstract
:1. Introduction
2. Results
2.1. GY Combined AMMI Analysis of Variance and Genotypic Variability
2.2. GEI-Structure-Based Additive Main Effect and Multiplicative Interaction Model
Source | Df | Sum Sq | Mean Sq | F Value | Pr (>F) | Proportion | Accumulated |
---|---|---|---|---|---|---|---|
ENV | 7 | 32,277,639 | 4,611,091 | 5554.827 | 0 | ||
REP(ENV) | 16 | 13,281.69 | 830.1054 | 1.703935 | 0.042241 | ||
GEN | 33 | 6,685,134 | 202,579.8 | 415.83 | 0 | ||
GEN:ENV | 231 | 6,311,279 | 27,321.56 | 56.08221 | 8.8 × 10−275 | ||
PC1 | 39 | 5,612,970 | 143,922.3 | 295.43 | 0 | 88.9 | 88.9 |
PC2 | 37 | 499,545.4 | 13,501.23 | 27.71 | 0 | 7.9 | 96.9 |
PC3 | 35 | 141,380.5 | 4039.443 | 8.29 | 0 | 2.2 | 99.1 |
PC4 | 33 | 28,625.39 | 867.4361 | 1.78 | 0.0054 | 0.5 | 99.5 |
PC5 | 31 | 15,441.88 | 498.1253 | 1.02 | 0.439 | 0.2 | 99.8 |
PC6 | 29 | 10,612.79 | 365.9583 | 0.75 | 0.8262 | 0.2 | 100 |
PC7 | 27 | 2703 | 100.1111 | 0.21 | 1 | 0 | 100 |
Residuals | 528 | 257,225.6 | 487.1697 | ||||
Total | 1046 | 51,855,839 | 49,575.37 |
2.3. Detection of Stable and High-Yielding Genotypes via AMMIs Model Biplot
2.4. Which–Won–Where Approach Based on GGE Biplot for Detecting the Best-Performing Genotypes
2.5. Grain Yield Versus Weighted Average of Absolute Score Stability Index Biplot
2.6. GGE Biplot—Means Versus Stability Model and Ranking of Rice Genotypes’ Performance
2.7. Cluster-Analysis-Based Stability Indices
2.8. Correlation Coefficient Analysis
3. Discussion
4. Materials and Methods
4.1. Plant Materials
4.2. Experimental Locations and Climatic Conditions
4.3. Experimental Design and Data Recording
4.4. Statistical Analysis
5. Conclusions
Supplementary Materials
Author Contributions
Funding
Data Availability Statement
Acknowledgments
Conflicts of Interest
References
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No. | Genotype | Origin | Type |
---|---|---|---|
1 | Giza 177 | Egypt | Japonica |
2 | Giza 178 | Egypt | Indica/Japonica |
3 | Giza 179 | Egypt | Indica/Japonica |
4 | Sakha 101 | Egypt | Japonica |
5 | Sakha 102 | Egypt | Japonica |
6 | Sakha 104 | Egypt | Japonica |
7 | Sakha 105 | Egypt | Japonica |
8 | Sakha 106 | Egypt | Japonica |
9 | Sakha 107 | Egypt | Japonica |
10 | Sakha 108 | Egypt | Japonica |
11 | Sakha Super 300 | Egypt | Japonica |
12 | IRAT 170 | Ivory Cost | Tropical japonica |
13 | A22 | Srilanka | Indica |
14 | Nerica 9 | Ivory cost | Indica |
15 | IET 1444 | Inbdia | Indica |
16 | Nerica 7 | Ivory Cost | Indica |
17 | Moroberekan | Guinea | Japonica |
18 | GZ 1368-S-5-4 | Egypt | Indica |
19 | Azucena | Philippine | Japonica |
20 | IRAT 112 | Ivory Cost | Indica |
21 | N22 | India | Aus |
22 | IR65600-77 | Philippines | Indica |
23 | IR69116 | Philippines | Indica |
24 | IR12G3213 | Philippines | Indica |
25 | IR69432 | Philippines | Indica |
26 | IR6500-127 | Philippines | Indica |
27 | IR11L236 | Philippines | Indica |
28 | IR12G3222 | Philippines | Indica |
29 | Sakha 109 | Egypt | Japonica |
30 | Vandana | India | Indica |
31 | Dular | India | Indica |
32 | Sakha 103 | Egypt | Japonica |
33 | Giza 181 | Egypt | Indica |
34 | Giza 182 | Egypt | Indica |
No. | Location (Governorate) | Altitude–Latitude |
---|---|---|
1 | Sakha (Kafr El-Sheikh) | 31.09° N and 30.9° E |
2 | Gemmiza (ElGharbya) | 30.88° N and 31.05° E |
3 | Sobahya (Alexandria) | 31.2° N and 29.9° E |
4 | Kharga oasis (New Valley) | 25.4° N and 30.5° E |
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Ghazy, M.I.; Abdelrahman, M.; El-Agoury, R.Y.; El-hefnawy, T.M.; EL-Naem, S.A.; Daher, E.M.; Rehan, M. Exploring Genetics by Environment Interactions in Some Rice Genotypes across Varied Environmental Conditions. Plants 2024, 13, 74. https://doi.org/10.3390/plants13010074
Ghazy MI, Abdelrahman M, El-Agoury RY, El-hefnawy TM, EL-Naem SA, Daher EM, Rehan M. Exploring Genetics by Environment Interactions in Some Rice Genotypes across Varied Environmental Conditions. Plants. 2024; 13(1):74. https://doi.org/10.3390/plants13010074
Chicago/Turabian StyleGhazy, Mohamed I., Mohamed Abdelrahman, Roshdy Y. El-Agoury, Tamer M. El-hefnawy, Sabry A. EL-Naem, Elhousini M. Daher, and Medhat Rehan. 2024. "Exploring Genetics by Environment Interactions in Some Rice Genotypes across Varied Environmental Conditions" Plants 13, no. 1: 74. https://doi.org/10.3390/plants13010074