Mining Favorable Alleles for Crop Yield, Biotic and Abiotic Stress Tolerance

A special issue of Biology (ISSN 2079-7737). This special issue belongs to the section "Plant Science".

Deadline for manuscript submissions: 1 October 2024 | Viewed by 1710

Special Issue Editors


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Guest Editor
Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
Interests: QTL mapping; favorable allele mining; designed QTL pyramiding (DQP); molecular rice breeding; disease resistance; salt tolerance; drought tolerance

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Guest Editor
Tasmanian Institute of Agriculture, University of Tasmania, Hobart, TAS, Australia
Interests: cereal breeding; plant molecular biology; plant physiology
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Special Issue Information

Dear Colleagues,

With the global population increase, we are facing great challenges in the provision of sufficient grains to feed the world due to a decrease in arable land, inadequate water resources, and frequent natural disasters. Climatic changes lead to rising temperatures, more frequent floods, more diseases and pest outbreaks, and frequent abiotic stresses such as drought, saline, and alkaline stresses. Crop production under biotic and abiotic stresses is becoming increasingly vulnerable and unsustainable. In addressing these challenges within a global warming environment and ensuring food security, crop breeding has assumed paramount significance. In recent years, significant advances have been made in identifying favorable alleles for yield and its components, as well as tolerance to biotic and abiotic stresses. This has been accomplished through advanced genetic methodologies, encompassing reverse genetics, forward genetics (including genetic linkage mapping and genome-wide association mapping), and high-throughput phenotyping platforms. These achievements provide a robust foundation for transferring or pyramiding a series of favorable allelic variations that are usually dispersed in different genetic resources via genomic selection and other state-of-the-art breeding technologies such as precise genome editing and gene transformation.

Hence, the main aim of the proposed Special Issue is to gather research methods, innovations, and knowledge in the areas of mining and utilization of favorable alleles for yield and its components, and biotic and abiotic stress tolerance in crops.

We invite researchers to contribute their original research papers and reviews on the following themes. Potential topics include, but are not limited to, the following:

  • Candidate gene and favorable allele identification for yield, biotic and abiotic stress tolerance;
  • Favorable haplotype-based molecular breeding;
  • Genome editing for yield and stress tolerance improvement;
  • Introgressing and pyramiding favorable genes via genomic selection.

Dr. Jianlong Xu
Prof. Dr. Meixue Zhou
Guest Editors

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Keywords

  • high yield
  • biotic and abiotic stress tolerance
  • favorable gene editing
  • favorable gene transformation
  • genomic selection
  • favorable allele or haplotype identification
  • pyramiding breeding by molecular technology

Published Papers (2 papers)

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Research

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15 pages, 4187 KiB  
Article
Genetic Analysis and Fine Mapping of QTL for the Erect Leaf in Mutant mths29 Induced through Fast Neutron in Wheat
by Zhixin Yang, Jiayu Gu, Minghui Zhao, Xiaofeng Fan, Huijun Guo, Yongdun Xie, Jinfeng Zhang, Hongchun Xiong, Linshu Zhao, Shirong Zhao, Yuping Ding, Fuquan Kong, Li Sui, Le Xu and Luxiang Liu
Biology 2024, 13(6), 430; https://doi.org/10.3390/biology13060430 - 11 Jun 2024
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Abstract
The erect leaf plays a crucial role in determining plant architecture, with its growth and development regulated by genetic factors. However, there has been a lack of comprehensive studies on the regulatory mechanisms governing wheat lamina joint development, thus failing to meet current [...] Read more.
The erect leaf plays a crucial role in determining plant architecture, with its growth and development regulated by genetic factors. However, there has been a lack of comprehensive studies on the regulatory mechanisms governing wheat lamina joint development, thus failing to meet current breeding demands. In this study, a wheat erect leaf mutant, mths29, induced via fast neutron mutagenesis, was utilized for QTL fine mapping and investigation of lamina joint development. Genetic analysis of segregating populations derived from mths29 and Jimai22 revealed that the erect leaf trait was controlled by a dominant single gene. Using BSR sequencing and map-based cloning techniques, the QTL responsible for the erect leaf trait was mapped to a 1.03 Mb physical region on chromosome 5A. Transcriptome analysis highlighted differential expression of genes associated with cell division and proliferation, as well as several crucial transcription factors and kinases implicated in lamina joint development, particularly in the boundary cells of the preligule zone in mths29. These findings establish a solid foundation for understanding lamina joint development and hold promise for potential improvements in wheat plant architecture. Full article
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Review

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22 pages, 2617 KiB  
Review
Molecular Basis of Plant–Pathogen Interactions in the Agricultural Context
by Usman Ijaz, Chenchen Zhao, Sergey Shabala and Meixue Zhou
Biology 2024, 13(6), 421; https://doi.org/10.3390/biology13060421 - 6 Jun 2024
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Abstract
Biotic stressors pose significant threats to crop yield, jeopardizing food security and resulting in losses of over USD 220 billion per year by the agriculture industry. Plants activate innate defense mechanisms upon pathogen perception and invasion. The plant immune response comprises numerous concerted [...] Read more.
Biotic stressors pose significant threats to crop yield, jeopardizing food security and resulting in losses of over USD 220 billion per year by the agriculture industry. Plants activate innate defense mechanisms upon pathogen perception and invasion. The plant immune response comprises numerous concerted steps, including the recognition of invading pathogens, signal transduction, and activation of defensive pathways. However, pathogens have evolved various structures to evade plant immunity. Given these facts, genetic improvements to plants are required for sustainable disease management to ensure global food security. Advanced genetic technologies have offered new opportunities to revolutionize and boost plant disease resistance against devastating pathogens. Furthermore, targeting susceptibility (S) genes, such as OsERF922 and BnWRKY70, through CRISPR methodologies offers novel avenues for disrupting the molecular compatibility of pathogens and for introducing durable resistance against them in plants. Here, we provide a critical overview of advances in understanding disease resistance mechanisms. The review also critically examines management strategies under challenging environmental conditions and R-gene-based plant genome-engineering systems intending to enhance plant responses against emerging pathogens. This work underscores the transformative potential of modern genetic engineering practices in revolutionizing plant health and crop disease management while emphasizing the importance of responsible application to ensure sustainable and resilient agricultural systems. Full article
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