Advances in Nanopore Biosensors

A special issue of Biosensors (ISSN 2079-6374). This special issue belongs to the section "Biosensor Materials".

Deadline for manuscript submissions: 30 September 2025 | Viewed by 789

Special Issue Editors


E-Mail Website
Guest Editor
Disease Target Structure Research Center, Division of Biomedical Research, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea
Interests: nanopore; biosensors; protein-protein interaction

E-Mail Website
Guest Editor
Department of Chemistry, University of Missouri, Columbia, MI 65211, USA
Interests: biosensors; chemosensors; organo-functional materials; CRISPR; optical sensors

E-Mail Website
Guest Editor
Department of Intelligent Systems Engineering, Indiana University, Bloomington, IN 47408, USA
Interests: biosensing devices for infectious and non-infectious disease diagnoses; nanopore sensing technologies; point-of-care testing; real-time sensing technologies for microfluidic organs on chips

Special Issue Information

Dear Colleagues,

Nanopore sensing technologies have gained tremendous popularity in recent years for diagnostic applications due to their label-free single-molecule detection capabilities. The emerging applications include detection of disease biomarkers like RNA, DNA, proteins, and peptides with high sensitivity and specificity; DNA and protein sequencing; detection of environmental pollutants and food contaminants like heavy metals, microplastics, food pathogens, etc. The nanopore detection mechanism is based on resistive pulse sensing in the ionic current established between two salt-solution reservoirs, separated by either a biological or a solid-state nanopore when a molecule passes through it under the influence of an applied electric field. While the biological nanopores are being widely explored for sequencing applications, the innovations in solid-state nanopores are leading the way for rapid and early diagnosis of infectious and non-infectious diseases. The use of various types of nanopore configurations, nanomaterial-based surface modifications, and the use of inorganic, organic, and hybrid materials have contributed to the improvement in the sensing performance of nanopore biosensors. However, variations in nanopore diameters, low signal-to-noise-ratios, and physical properties of these nanopore biosensors greatly impact the molecular transport dynamics. Therefore, there is still a critical need for highly reproducible, stable, and sensitive nanopore systems for expanding their application portfolio as a clinical tool in biomedical fields.

For this Special Issue, we welcome original research papers as well as reviews on the recent advancements in the development of highly sensitive and specific biological and solid-state nanopore biosensing technologies. This includes the design and fabrication of state-of-the-art nanopore biosensors for disease biomarkers, characterization of biomolecules like secretions from single cells, study of nanopore transport mechanisms, and point-of-care implementations. To expand on the contributions to this Special Issue, the original theoretical research on multiparametric modelling of the molecular transport through different nanopores is also encouraged. The design and development of nanopore-based point-of-care diagnostic systems is of special interest. Reviews should provide an in-depth examination of the most recent research in a specific context or discuss the existing and future issues related to nanopore sensing in the biomedical field.

Dr. Ki-baek Jeong
Dr. Sathishkumar Munusamy
Dr. Muhammad Asad Ullah Khalid
Guest Editors

Manuscript Submission Information

Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 100 words) can be sent to the Editorial Office for announcement on this website.

Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Biosensors is an international peer-reviewed open access monthly journal published by MDPI.

Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2200 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.

Keywords

  • nanopore
  • biosensor
  • single-molecule detection
  • biological nanopore
  • solid-state nanopore
  • disease diagnosis
  • DNA detection
  • protein detection
  • point-of-care nanopore
  • nanomaterial
  • functionalized nanopore
  • sequencing

Benefits of Publishing in a Special Issue

  • Ease of navigation: Grouping papers by topic helps scholars navigate broad scope journals more efficiently.
  • Greater discoverability: Special Issues support the reach and impact of scientific research. Articles in Special Issues are more discoverable and cited more frequently.
  • Expansion of research network: Special Issues facilitate connections among authors, fostering scientific collaborations.
  • External promotion: Articles in Special Issues are often promoted through the journal's social media, increasing their visibility.
  • Reprint: MDPI Books provides the opportunity to republish successful Special Issues in book format, both online and in print.

Further information on MDPI's Special Issue policies can be found here.

Published Papers (1 paper)

Order results
Result details
Select all
Export citation of selected articles as:

Review

27 pages, 5309 KiB  
Review
The Potential of Nanopore Technologies in Peptide and Protein Sensing for Biomarker Detection
by Iuliana Șoldănescu, Andrei Lobiuc, Olga Adriana Caliman-Sturdza, Mihai Covasa, Serghei Mangul and Mihai Dimian
Biosensors 2025, 15(8), 540; https://doi.org/10.3390/bios15080540 - 16 Aug 2025
Viewed by 494
Abstract
The increasing demand for high-throughput, real-time, and single-molecule protein analysis in precision medicine has propelled the development of novel sensing technologies. Among these, nanopore-based methods have garnered significant attention for their unique capabilities, including label-free detection, ultra-sensitivity, and the potential for miniaturization and [...] Read more.
The increasing demand for high-throughput, real-time, and single-molecule protein analysis in precision medicine has propelled the development of novel sensing technologies. Among these, nanopore-based methods have garnered significant attention for their unique capabilities, including label-free detection, ultra-sensitivity, and the potential for miniaturization and portability. Originally designed for nucleic acid sequencing, nanopore technology is now being adapted for peptide and protein analysis, offering promising applications in biomarker discovery and disease diagnostics. This review examines the latest advances in biological, solid-state, and hybrid nanopores for protein sensing, focusing on their ability to detect amino acid sequences, structural variants, post-translational modifications, and dynamic protein–protein or protein–drug interactions. We critically compare these systems to conventional proteomic techniques, such as mass spectrometry and immunoassays, discussing advantages and persistent technical challenges, including translocation control and signal deconvolution. Particular emphasis is placed on recent advances in protein sequencing using biological and solid-state nanopores and the integration of machine learning and signal-processing algorithms that enhance the resolution and accuracy of protein identification. Nanopore protein sensing represents a disruptive innovation in biosensing, with the potential to revolutionize clinical diagnostics, therapeutic monitoring, and personalized healthcare. Full article
(This article belongs to the Special Issue Advances in Nanopore Biosensors)
Show Figures

Figure 1

Back to TopTop