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The Roles of VIP and PACAP: From Molecular and Genetic Studies

A special issue of International Journal of Molecular Sciences (ISSN 1422-0067). This special issue belongs to the section "Molecular Genetics and Genomics".

Deadline for manuscript submissions: closed (15 January 2023) | Viewed by 18289

Special Issue Editor


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Guest Editor
Department of Functional Morphology, Shonan University of Medical Sciences, 16-48 Kamishinano, Totsuka-ku, Yokohama 244-0806, Japan
Interests: VIP; PACAP; neuroprotection; neurogenesis
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear colleagues,

Recent studies have shown that neuropeptides, VIP and PACAP, are closely related to stroke, dementias, cancers, dry syndromes, etc. not only in the central and peripheral nervous system but also in the digestive, sensory, immune, endocrine, reproductive and other systems. Additionally, the mechanism of the crisis of the disease is also being clarified by multiple basic research. In addition, drug discovery development becomes possible on the basis of basic research on prevention and therapy of these diseases. Moreover, clinical research has also begun on the derivatives of VIP being used as preventive and therapeutic agents for Alzheimer's disease. Recently, it has been suggested that PACAP also plays a major role in the degradation of the tau protein at the neuronal ends and is associated with Alzheimer’s disease. We have also found that VIP and PACAP also act on neural stem cells, particularly in the hippocampus, for nerve regeneration and neurogenesis, which may also be applied to treat nerve regeneration in the near future. Therefore, in this Special Issue, we wish to focus on both peptides and review the current and future basic research and clinical applications based on them to better understand their roles from molecular and genetic studies. We ask experts in the field to contribute their latest research, perspectives, or reviews on this fascinating and rapidly progressing topic.

Prof. Dr. Seiji Shioda
Guest Editor

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Keywords

  • VIP
  • PACAP
  • stroke
  • alzheimer’s disease
  • cancer
  • dry syndrome

Published Papers (8 papers)

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Research

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27 pages, 4119 KiB  
Article
Diagnostic and Prognostic Value of PACAP in Multiple Myeloma
by Tünde Tóth, Hussain Alizadeh, Beáta Polgár, Renáta Csalódi, Dóra Reglődi and Andrea Tamás
Int. J. Mol. Sci. 2023, 24(13), 10801; https://doi.org/10.3390/ijms241310801 - 28 Jun 2023
Cited by 1 | Viewed by 1243
Abstract
Pituitary adenylate cyclase-activating polypeptide (PACAP) is a multifunctional neuropeptide with well-known anti-inflammatory, antioxidant, antitumor, and immunomodulatory effects. PACAP regulates the production of various proinflammatory factors and may influence the complex cytokine network of the bone marrow microenvironment altered by plasma cells, affecting the [...] Read more.
Pituitary adenylate cyclase-activating polypeptide (PACAP) is a multifunctional neuropeptide with well-known anti-inflammatory, antioxidant, antitumor, and immunomodulatory effects. PACAP regulates the production of various proinflammatory factors and may influence the complex cytokine network of the bone marrow microenvironment altered by plasma cells, affecting the progression of multiple myeloma (MM) and the development of end-organ damage. The aim of our study was to investigate the changes in PACAP-38 levels in patients with MM to explore its value as a potential biomarker in this disease. We compared the plasma PACAP-38 levels of MM patients with healthy individuals by ELISA method and examined its relationship with various MM-related clinical and laboratory parameters. Lower PACAP-38 levels were measured in MM patients compared with the healthy controls, however, this difference vanished if the patient achieved any response better than partial response. In addition, lower peptide levels were found in elderly patients. Significantly higher PACAP-38 levels were seen in patients with lower stage, lower plasma cell infiltration in bone marrow, lower markers of tumor burden in serum, lower total urinary and Bence-Jones protein levels, and in patients after lenalidomide therapy. Higher PACAP-38 levels in newly diagnosed MM patients predicted longer survival and a higher probability of complete response to treatment. Our findings confirm the hypothesis that PACAP plays an important role in the pathomechanism of MM. Furthermore, our results suggest that PACAP might be used as a valuable, non-invasive, complementary biomarker in diagnosis, and may be utilized for prognosis prediction and response monitoring. Full article
(This article belongs to the Special Issue The Roles of VIP and PACAP: From Molecular and Genetic Studies)
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16 pages, 3145 KiB  
Article
Identification of Key Genes and Regulatory Pathways in Multiple Sclerosis Brain Samples: A Meta-Analysis of Micro-Array Datasets
by Margo I. Jansen and Alessandro Castorina
Int. J. Mol. Sci. 2023, 24(11), 9361; https://doi.org/10.3390/ijms24119361 - 27 May 2023
Viewed by 1601
Abstract
Multiple sclerosis (MS) is an autoimmune disorder of the central nervous system (CNS) whose aetiology is only partly understood. Investigating the intricate transcriptional changes occurring in MS brains is critical to unravel novel pathogenic mechanisms and therapeutic targets. Unfortunately, this process is often [...] Read more.
Multiple sclerosis (MS) is an autoimmune disorder of the central nervous system (CNS) whose aetiology is only partly understood. Investigating the intricate transcriptional changes occurring in MS brains is critical to unravel novel pathogenic mechanisms and therapeutic targets. Unfortunately, this process is often hindered by the difficulty in retrieving an adequate number of samples. However, by merging data from publicly available datasets, it is possible to identify alterations in gene expression profiles and regulatory pathways that were previously overlooked. Here, we merged microarray gene expression profiles obtained from CNS white matter samples taken from MS donors to identify novel differentially expressed genes (DEGs) linked with MS. Data from three independent datasets (GSE38010, GSE32915, and GSE108000) were combined and used to detect novel DEGs using the Stouffer’s Z-score method. Corresponding regulatory pathways were analysed using the Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway databases. Finally, top up- and down-regulated transcripts were validated by real-time quantitative PCR (qPCR) using an independent set of white matter tissue samples obtained from MS donors with different disease subtypes. There were a total of 1446 DEGs, of which 742 were up-regulated and 704 genes were down-regulated. DEGs were associated with several myelin-related pathways and protein metabolism pathways. Validation studies of selected top up- or down-regulated genes highlighted MS subtype-specific differences in the expression of some of the identified genes, underlining a more complex scenario of white matter pathology amongst people afflicted by this devastating disease. Full article
(This article belongs to the Special Issue The Roles of VIP and PACAP: From Molecular and Genetic Studies)
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12 pages, 3711 KiB  
Article
Regulation of UV-B-Induced Inflammatory Mediators by Activity-Dependent Neuroprotective Protein (ADNP)-Derived Peptide (NAP) in Corneal Epithelium
by Grazia Maugeri, Agata Grazia D’Amico, Benedetta Magrì, Salvatore Giunta, Giuseppe Musumeci, Salvatore Saccone, Concetta Federico, Davide Scollo, Antonio Longo, Teresio Avitabile and Velia D’Agata
Int. J. Mol. Sci. 2023, 24(8), 6895; https://doi.org/10.3390/ijms24086895 - 7 Apr 2023
Cited by 1 | Viewed by 1314
Abstract
The corneal epithelium, representing the outermost layer of the cornea, acts as a barrier to protect the eye against external insults such as ultraviolet B (UV-B) radiations. The inflammatory response induced by these adverse events can alter the corneal structure, leading to visual [...] Read more.
The corneal epithelium, representing the outermost layer of the cornea, acts as a barrier to protect the eye against external insults such as ultraviolet B (UV-B) radiations. The inflammatory response induced by these adverse events can alter the corneal structure, leading to visual impairment. In a previous study, we demonstrated the positive effects of NAP, the active fragment of activity-dependent protein (ADNP), against oxidative stress induced by UV-B radiations. Here, we investigated its role to counteract the inflammatory event triggered by this insult contributing to the disruption of the corneal epithelial barrier. The results indicated that NAP treatment prevents UV-B-induced inflammatory processes by affecting IL-1β cytokine expression and NF-κB activation, as well as maintaining corneal epithelial barrier integrity. These findings may be useful for the future development of an NAP-based therapy for corneal disease. Full article
(This article belongs to the Special Issue The Roles of VIP and PACAP: From Molecular and Genetic Studies)
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17 pages, 3596 KiB  
Article
OMICS Analyses Unraveling Related Gene and Protein-Driven Molecular Mechanisms Underlying PACAP 38-Induced Neurite Outgrowth in PC12 Cells
by Junko Shibato, Fumiko Takenoya, Michio Yamashita, Ravi Gupta, Cheol Woo Min, Sun Tae Kim, Ai Kimura, Ichiro Takasaki, Motohide Hori, Seiji Shioda and Randeep Rakwal
Int. J. Mol. Sci. 2023, 24(4), 4169; https://doi.org/10.3390/ijms24044169 - 20 Feb 2023
Cited by 2 | Viewed by 2878
Abstract
The study aimed to understand mechanism/s of neuronal outgrowth in the rat adrenal-derived pheochromocytoma cell line (PC12) under pituitary adenylate cyclase-activating polypeptide (PACAP) treatment. Neurite projection elongation was suggested to be mediated via Pac1 receptor-mediated dephosphorylation of CRMP2, where GSK-3β, CDK5, and Rho/ROCK [...] Read more.
The study aimed to understand mechanism/s of neuronal outgrowth in the rat adrenal-derived pheochromocytoma cell line (PC12) under pituitary adenylate cyclase-activating polypeptide (PACAP) treatment. Neurite projection elongation was suggested to be mediated via Pac1 receptor-mediated dephosphorylation of CRMP2, where GSK-3β, CDK5, and Rho/ROCK dephosphorylated CRMP2 within 3 h after addition of PACAP, but the dephosphorylation of CRMP2 by PACAP remained unclear. Thus, we attempted to identify the early factors in PACAP-induced neurite projection elongation via omics-based transcriptomic (whole genome DNA microarray) and proteomic (TMT-labeled liquid chromatography-tandem mass spectrometry) analyses of gene and protein expression profiles from 5–120 min after PACAP addition. The results revealed a number of key regulators involved in neurite outgrowth, including known ones, called ‘Initial Early Factors’, e.g., genes Inhba, Fst, Nr4a1,2,3, FAT4, Axin2, and proteins Mis12, Cdk13, Bcl91, CDC42, including categories of ‘serotonergic synapse, neuropeptide and neurogenesis, and axon guidance’. cAMP signaling and PI3K-Akt signaling pathways and a calcium signaling pathway might be involved in CRMP2 dephosphorylation. Cross-referencing previous research, we tried to map these molecular components onto potential pathways, and we may provide important new information on molecular mechanisms of neuronal differentiation induced by PACAP. Gene and protein expression data are publicly available at NCBI GSE223333 and ProteomeXchange, identifier PXD039992. Full article
(This article belongs to the Special Issue The Roles of VIP and PACAP: From Molecular and Genetic Studies)
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19 pages, 5450 KiB  
Article
Effect of PACAP on Heat Exposure
by Keisuke Suzuki, Hiroki Yamaga, Hirokazu Ohtaki, Satoshi Hirako, Kazuyuki Miyamoto, Motoyasu Nakamura, Kaoru Yanagisawa, Takuya Shimada, Tomohiko Hosono, Hitoshi Hashimoto, Kazuho Honda and Kenji Dohi
Int. J. Mol. Sci. 2023, 24(4), 3992; https://doi.org/10.3390/ijms24043992 - 16 Feb 2023
Viewed by 1612
Abstract
Heat stroke is a life-threatening illness caused by exposure to high ambient temperatures and relative humidity. The incidence of heat stroke is expected to increase due to climate change. Although pituitary adenylate cyclase-activating polypeptide (PACAP) has been implicated in thermoregulation, the role of [...] Read more.
Heat stroke is a life-threatening illness caused by exposure to high ambient temperatures and relative humidity. The incidence of heat stroke is expected to increase due to climate change. Although pituitary adenylate cyclase-activating polypeptide (PACAP) has been implicated in thermoregulation, the role of PACAP on heat stress remains unclear. PACAP knockout (KO) and wild-type ICR mice were subjected to heat exposure at an ambient temperature of 36 °C and relative humidity of 99% for 30–150 min. After heat exposure, the PACAP KO mice had a greater survival rate and maintained a lower body temperature than the wild-type mice. Moreover, the gene expression and immunoreaction of c-Fos in the ventromedially preoptic area of the hypothalamus, which is known to harbor temperature-sensitive neurons, were significantly lower in PACAP KO mice than those in wild-type mice. In addition, differences were observed in the brown adipose tissue, the primary site of heat production, between PACAP KO and wild-type mice. These results suggest that PACAP KO mice are resistant to heat exposure. The heat production mechanism differs between PACAP KO and wild-type mice. Full article
(This article belongs to the Special Issue The Roles of VIP and PACAP: From Molecular and Genetic Studies)
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17 pages, 1756 KiB  
Article
VIP/VPAC Axis Expression in Immune-Mediated Inflammatory Disorders: Associated miRNA Signatures
by Amalia Lamana, David Castro-Vázquez, Hortensia de la Fuente, Ana Triguero-Martínez, Rebeca Martínez-Hernández, Marcelino Revenga, Raúl Villanueva-Romero, Mar Llamas-Velasco, Pablo Chicharro, Yasmina Juarranz, Mónica Marazuela, Marco Sales-Sanz, Rosario García-Vicuña, Eva Tomero, Isidoro González-Álvaro, Carmen Martínez and Rosa P. Gomariz
Int. J. Mol. Sci. 2022, 23(15), 8578; https://doi.org/10.3390/ijms23158578 - 2 Aug 2022
Cited by 3 | Viewed by 1723
Abstract
Few studies have considered immune-mediated inflammatory disorders (IMID) together, which is necessary to adequately understand them given they share common mechanisms. Our goal was to investigate the expression of vasoactive intestinal peptide (VIP) and its receptors VPAC1 and VPAC2 in selected IMID, analyze [...] Read more.
Few studies have considered immune-mediated inflammatory disorders (IMID) together, which is necessary to adequately understand them given they share common mechanisms. Our goal was to investigate the expression of vasoactive intestinal peptide (VIP) and its receptors VPAC1 and VPAC2 in selected IMID, analyze the effect of biological therapies on them, and identify miRNA signatures associated with their expression. Serum VIP levels and mRNA of VPAC and miRNA expression in peripheral blood mononuclear cells were analyzed from 52 patients with psoriasis, rheumatoid arthritis, Graves’ disease, or spondyloarthritis and from 38 healthy subjects. IMID patients showed higher levels of VIP and increased expression of VPAC2 compared to controls (p < 0.0001 and p < 0.0192, respectively). Receiver operating characteristic curve analysis showed that the levels of VIP or VPAC2 expression were adequate discriminators capable of identifying IMID. Treatment of IMID patients with anti-TNFα and anti-IL12/23 significantly affected serum VIP levels. We identified miRNA signatures associated with levels of serum VIP and VPAC2 expression, which correlated with IMID diagnosis of the patients. The results indicate that the expression of VIP/VPAC2 is able of identify IMIDs and open up a line of research based on the association between the VIP/VPAC axis and miRNA signatures in immune-mediated diseases. Full article
(This article belongs to the Special Issue The Roles of VIP and PACAP: From Molecular and Genetic Studies)
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Review

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10 pages, 1480 KiB  
Review
Activity-Dependent Neuroprotective Protein (ADNP): An Overview of Its Role in the Eye
by Grazia Maugeri, Agata Grazia D’Amico, Benedetta Magrì, Giuseppe Musumeci and Velia D’Agata
Int. J. Mol. Sci. 2022, 23(21), 13654; https://doi.org/10.3390/ijms232113654 - 7 Nov 2022
Cited by 4 | Viewed by 2147
Abstract
Vision is one of the dominant senses in humans and eye health is essential to ensure a good quality of life. Therefore, there is an urgent necessity to identify effective therapeutic candidates to reverse the progression of different ocular pathologies. Activity-dependent neuroprotective protein [...] Read more.
Vision is one of the dominant senses in humans and eye health is essential to ensure a good quality of life. Therefore, there is an urgent necessity to identify effective therapeutic candidates to reverse the progression of different ocular pathologies. Activity-dependent neuroprotective protein (ADNP) is a protein involved in the physio-pathological processes of the eye. Noteworthy, is the small peptide derived from ADNP, known as NAP, which shows protective, antioxidant, and anti-apoptotic properties. Herein, we review the current state of knowledge concerning the role of ADNP in ocular pathologies, while providing an overview of eye anatomy. Full article
(This article belongs to the Special Issue The Roles of VIP and PACAP: From Molecular and Genetic Studies)
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38 pages, 3362 KiB  
Review
Targeting VIP and PACAP Receptor Signaling: New Insights into Designing Drugs for the PACAP Subfamily of Receptors
by Jessica Lu, Sarah J. Piper, Peishen Zhao, Laurence J. Miller, Denise Wootten and Patrick M. Sexton
Int. J. Mol. Sci. 2022, 23(15), 8069; https://doi.org/10.3390/ijms23158069 - 22 Jul 2022
Cited by 11 | Viewed by 4931
Abstract
Pituitary Adenylate Cyclase-Activating Peptide (PACAP) and Vasoactive Intestinal Peptide (VIP) are neuropeptides involved in a diverse array of physiological and pathological processes through activating the PACAP subfamily of class B1 G protein-coupled receptors (GPCRs): VIP receptor 1 (VPAC1R), VIP receptor 2 (VPAC2R), and [...] Read more.
Pituitary Adenylate Cyclase-Activating Peptide (PACAP) and Vasoactive Intestinal Peptide (VIP) are neuropeptides involved in a diverse array of physiological and pathological processes through activating the PACAP subfamily of class B1 G protein-coupled receptors (GPCRs): VIP receptor 1 (VPAC1R), VIP receptor 2 (VPAC2R), and PACAP type I receptor (PAC1R). VIP and PACAP share nearly 70% amino acid sequence identity, while their receptors PAC1R, VPAC1R, and VPAC2R share 60% homology in the transmembrane regions of the receptor. PACAP binds with high affinity to all three receptors, while VIP binds with high affinity to VPAC1R and VPAC2R, and has a thousand-fold lower affinity for PAC1R compared to PACAP. Due to the wide distribution of VIP and PACAP receptors in the body, potential therapeutic applications of drugs targeting these receptors, as well as expected undesired side effects, are numerous. Designing selective therapeutics targeting these receptors remains challenging due to their structural similarities. This review discusses recent discoveries on the molecular mechanisms involved in the selectivity and signaling of the PACAP subfamily of receptors, and future considerations for therapeutic targeting. Full article
(This article belongs to the Special Issue The Roles of VIP and PACAP: From Molecular and Genetic Studies)
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