Wheat Germplasm Improvement and Resistance Breeding

A special issue of Plants (ISSN 2223-7747). This special issue belongs to the section "Crop Physiology and Crop Production".

Deadline for manuscript submissions: closed (20 August 2024) | Viewed by 2030

Special Issue Editor


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Guest Editor
Agriculture and Agri-Food Canada, Lethbridge Research and Development Centre, Lethbridge, AB T1J 4B1, Canada
Interests: QTL/gene mapping; host–pathogen interaction; plant-associated-microbiome-mediated resistance; innate immunity; resistance breeding

Special Issue Information

Dear Colleagues,

Wheat can grow in a wide range of climates and soil conditions and remains an important cereal crop around the globe. Extensive breeding efforts have gone into wheat improvement over the years, during the late twentieth and early twenty-first centuries, leading to the development of a large number of high-yielding cultivars with improved grain quality. It has also been subjected to enormous cytogenetic studies during the last century and extensive genetic and molecular studies over the past few decades. Thanks to recent genomic and technological advances, the complex wheat genome has now been sequenced along with the genomes and transcriptomes of many wheat cultivars. Moreover, intense analyses of different genes/gene families have also greatly improved our knowledge about their molecular functions and phenotypic effects in wheat. However, despite these strides, challenges persist, with diseases, pests, and abiotic stresses continuing to impact wheat production, amounting to billions of dollars per year in losses. Further increase in yield and better quality of wheat can be achieved through the improvement of resistance to different biotic and abiotic stresses. Improving our understanding of the resistance mechanisms, genetic variation, and resources available for breeding wheat can facilitate the development of superior wheat cultivars and management strategies for different stresses.

Topics of interest for this Special Issue of Plants encompass:

Biotic stress resistance:

  1. Etiology and virulence dynamics
  2. Epistasis, suppressors, and susceptibility factors
  3. Major gene resistance
  4. Quantitative resistance
  5. Durable resistance
  6. Recessive genes and temperature-sensitive or high-temperature resistance
  7. All-stage and stage-specific resistance
  8. Innate immunity
  9. The mapping and cloning of resistance genes
  10. The role of metabolism, signaling, and proteomics in plant disease resistance
  11. Transcription factors in plant disease resistance
  12. Small RNAs, transposable elements, and epigenetics in resistance
  13. Systems biology for plant disease resistance
  14. RNAi and dsRNA applications for developing resistance
  15. Genome editing for developing resistance
  16. Plant–microbe interactions
  17. Plant-associated microbiome-mediated resistance

Abiotic stress resistance:

  1. Seed dormancy and resistance to pre-harvest sprouting
  2. Heat tolerance
  3. Cold tolerance/winter hardiness
  4. Drought tolerance/water-use efficiency
  5. Salinity resistance
  6. Waterlogging tolerance
  7. The effects of elevated carbon dioxide (CO2), ozone (O3), and UV radiation
  8. Nutrient use efficiency and the effects of excess and low nitrogen and other macro- and micro-nutrients

Common topics:

  1. Resistance genes and molecular markers
  2. Pre-breeding and alien introgression
  3. Classical and modern resistance breeding methods
  4. Marker-assisted breeding and genomic selection
  5. Phenomics for biotic and abiotic stresses
  6. Resistance breeding efforts: success stories
  7. Plant resistance gene and variety databases
  8. Domestic and international regulations for the use of wild and cultivated/mutant resistance germplasm and genome edited/genetically modified breeding lines

Original research articles and reviews, communications, and short notes are welcome.

Dr. Raman Dhariwal
Guest Editor

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Keywords

  • cereal disease
  • pathogen
  • insects
  • disease resistance
  • dominant genes
  • recessive genes
  • herbivory and insect resistance
  • defense mechanism
  • defense signaling
  • hormones
  • secondary metabolism
  • induced resistance
  • systemic acquired resistance
  • innate immunity
  • seed dormancy
  • pre-harvest sprouting
  • cold tolerance

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Published Papers (1 paper)

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Research

18 pages, 2858 KiB  
Article
Genome-Wide Association Study Reveals Novel Powdery Mildew Resistance Loci in Bread Wheat
by Ramandeep Kaur, Neeraj Kumar Vasistha, Vikas Kumar Ravat, Vinod Kumar Mishra, Sandeep Sharma, Arun Kumar Joshi and Raman Dhariwal
Plants 2023, 12(22), 3864; https://doi.org/10.3390/plants12223864 - 15 Nov 2023
Viewed by 1401
Abstract
Powdery mildew (PM), caused by the fungal pathogen Blumeria graminis f. sp. tritici (Bgt), significantly threatens global bread wheat production. Although the use of resistant cultivars is an effective strategy for managing PM, currently available wheat cultivars lack sufficient levels of [...] Read more.
Powdery mildew (PM), caused by the fungal pathogen Blumeria graminis f. sp. tritici (Bgt), significantly threatens global bread wheat production. Although the use of resistant cultivars is an effective strategy for managing PM, currently available wheat cultivars lack sufficient levels of resistance. To tackle this challenge, we conducted a comprehensive genome-wide association study (GWAS) using a diverse panel of 286 bread wheat genotypes. Over three consecutive years (2020–2021, 2021–2022, and 2022–2023), these genotypes were extensively evaluated for PM severity under field conditions following inoculation with virulent Bgt isolates. The panel was previously genotyped using the Illumina 90K Infinium iSelect assay to obtain genome-wide single-nucleotide polymorphism (SNP) marker coverage. By applying FarmCPU, a multilocus mixed model, we identified a total of 113 marker–trait associations (MTAs) located on chromosomes 1A, 1B, 2B, 3A, 3B, 4A, 4B, 5A, 5B, 6B, 7A, and 7B at a significance level of p ≤ 0.001. Notably, four novel MTAs on chromosome 6B were consistently detected in 2020–2021 and 2021–2022. Furthermore, within the confidence intervals of the identified SNPs, we identified 96 candidate genes belonging to different proteins including 12 disease resistance/host–pathogen interaction-related protein families. Among these, protein kinases, leucine-rich repeats, and zinc finger proteins were of particular interest due to their potential roles in PM resistance. These identified loci can serve as targets for breeding programs aimed at developing disease-resistant wheat cultivars. Full article
(This article belongs to the Special Issue Wheat Germplasm Improvement and Resistance Breeding)
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