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Genomewide SNP Identification and Use for Resolving Population Structure and GWAS of Traits of Interest Volume II
This special issue belongs to the section “Plant Genetics, Genomics and Biotechnology“.
Special Issue Information
Dear Colleagues,
With the merging of methodologies for making reduced-representation/resequencing libraries, RNAseq, next-generation sequencing and bioinformatic approaches have recently emerged for identifying genome-wide SNPs and insertions/deletions (InDELs) for resolving population structure, along with genome-wide association studies (GWAS), QTL/eQTL mapping, and bulk segregant analysis, which can be used to identify genomic regions of interest. These reduced-representation and resequencing methods are currently having great impacts in studying novel and existing genetic variation for various crop-improvement programs as well as model and non-model plants of ecological significance. In Volume II, we expand the scope of functional genomics involving RNAseq and qRT-PCR validations targeting mapped traits of interest.
The purpose of this Special Issue is to publish high-quality research papers as well as review articles addressing recent studies involving SNP mining, resolving population structures, haplotype networking, and GWAS as emerging tools for plant breeding and ecology research. Original, high-quality contributions that have not yet been published or that are not currently under review by other journals or peer-reviewed conferences are sought.
Prof. Dr. Umesh K. Reddy
Dr. Suhas Shinde
Prof. Dr. Padma Nimmakayala
Dr. Purushothaman Natarajan
Guest Editors
Manuscript Submission Information
Manuscripts should be submitted online at www.mdpi.com by registering and logging in to this website. Once you are registered, click here to go to the submission form. Manuscripts can be submitted until the deadline. All submissions that pass pre-check are peer-reviewed. Accepted papers will be published continuously in the journal (as soon as accepted) and will be listed together on the special issue website. Research articles, review articles as well as short communications are invited. For planned papers, a title and short abstract (about 250 words) can be sent to the Editorial Office for assessment.
Submitted manuscripts should not have been published previously, nor be under consideration for publication elsewhere (except conference proceedings papers). All manuscripts are thoroughly refereed through a single-blind peer-review process. A guide for authors and other relevant information for submission of manuscripts is available on the Instructions for Authors page. Plants is an international peer-reviewed open access semimonthly journal published by MDPI.
Please visit the Instructions for Authors page before submitting a manuscript. The Article Processing Charge (APC) for publication in this open access journal is 2700 CHF (Swiss Francs). Submitted papers should be well formatted and use good English. Authors may use MDPI's English editing service prior to publication or during author revisions.
Keywords
- SNP mining and InDELs
- Population structure analysis
- GWAS
- High-density QTL mapping
- Haplotype networking
- Genomics of wild crop relatives
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