1. Introduction
Penaeid shrimp is an economically important aquaculture species in China. However, an efficient gene transfer and expression tool is lacking for both shrimp individuals and in vitro cultured shrimp cells. At the very beginning, many attempts had been made to introduce foreign genes into the eggs or early embryos of penaeid shrimp by physical methods like microinjection, electroporation and particle bombardment, but these attempts failed [
1,
2,
3]. This can be attributed to the inherent problems, including the injection-induced burst, especially for homolecithal eggs, the quick cleavage, and the low integration and survival rates. Later, chemical methods like lipofection and biological methods of virus-mediated gene transfer and expression systems, including mammalian-sourced modified retrovirus, lentivirus and adeno-associated virus (AAV), as well as insect-sourced modified baculovirus, were successively tried in in vitro cultured shrimp cells, but they achieved limited success, with very low transfection or infection efficiencies in comparison with the results from mammalian tumor cells or insect cells due to the lack of actively dividing shrimp cells and the extremely low tropism of the viruses used [
4,
5,
6,
7,
8,
9]. Thus, an efficient gene transfer and expression tool is urgently needed for shrimps and shrimp cells.
It has been well recognized that a lot of great success in the biological field can be attributed to a great degree to the use of mammalian virus-mediated gene transfer and expression systems such as retrovirus, lentivirus, adenovirus and AAV because of their high infectivity and high gene delivery efficiency as well as their low cytotoxicity [
10,
11,
12,
13]. However, all of the aforementioned mammalian virus-mediated expression systems had extremely low tropism in shrimp cells, even though they were improved to be pantropic by pseudo-typing with a foreign envelope glycoprotein of vesicular stomatitis virus (VSV-G) [
4,
5,
6,
7,
8,
14]. For example, Pu et al. [
4] and Chen et al. [
5] further improved the tropism of the pantropic retrovirus and lentivirus expression systems in shrimp cells by introducing two envelope proteins of VP28 and VP19 of shrimp white spot syndrome virus (WSSV) into the envelope of the corresponding virions packaged via the co-transfection method, respectively; however, the infection and expression efficiencies obtained in shrimp cells were far lower than what was achieved in mammalian tumor cells. Recently, Tao et al. [
8] modified the capsid of the packaged AAV-2 by introducing the shrimp WSSV-sourced tegument protein of VP26 or shrimp infectious hypodermal and hematopoietic necrosis virus (IHHNV)-sourced capsid protein (IHCP) via the co-transfection method and significantly improved the tropism of the modified AAV-2 in shrimp cells, but the infection and expression efficiencies obtained in shrimp cells were still much lower than those in mammalian cells.
Attempts have also been made in terms of the improvement of Bac-to-Bac insect baculovirus expression systems since unmodified baculovirus could not efficiently infect shrimps and shrimp cells [
9,
15]. For example, Puthumana et al. [
15] modified the baculovirus vector by insertion of shrimp virus-sourced promoters of Ie1 (WSSV) and P2 (IHHNV) and found that the modified baculovirus could successfully infect the adult shrimp tissues, although the infection efficiency was still low (<20%). In contrast, Wu et al. [
9] developed a shrimp WSSV envelope protein VP28-pseudo-typed baculovirus expression system and found that the improved baculovirus could infect the primarily cultured shrimp hemolymph cells at a very low efficiency (1.2%) but adult shrimp tissues at an extremely high efficiency of nearly 100%, suggesting the better performance of the insect baculovirus in shrimps in contrast to mammalian viruses [
4,
5,
6,
7].
Compared with mammalian and insect viruses, shrimp virus has an incomparable advantage in the tropism to shrimp cells. Thus, we believe that efficient infection and foreign gene expression in shrimp cells can be expected from the development of a shrimp virus-mediated gene transfer and expression system. Recently, based on a shrimp RNA virus of
Macrobrachium rosenbergii nodavirus (MrNV), Alenton et al. [
16] developed a shrimp viral vector, a replication-incompetent mutant MrNV(ΔRdRp)-GFP, for RNA delivery, paving the way for the oral delivery of antiviral therapeutics in farmed crustaceans. However, to date, no shrimp DNA virus-mediated gene transfer and expression system have ever been established.
The infectious hypodermal and hematopoietic necrosis virus (IHHNV) belongs to the genus Penstylhamaparvovirus, family Parvoviridae and subfamily Hamaparvovirinae. It was also called PstDV because it was first found from
Penaeus stylirostris in Hawaii (USA) [
17,
18], and later found in other shrimp species, crabs and bivalves [
19,
20,
21,
22,
23]. IHHNV was found to be an unenveloped icosahedral DNA virus containing a linear single-stranded genomic DNA of no more than 4.1 kb in size, the smallest known penaeid shrimp virus [
24]. This makes it feasible for the genomic DNA of shrimp IHHNV to be engineered into an expression vector. The genomic DNA of IHHNV contains three open reading frames of ORF1, ORF2 and ORF3, driven by three promoters of P2, P11 and P61 in their upstream, respectively [
25,
26]. These three promoters were found to be active not only in shrimp cells but also in insect and fish cells. Moreover, the capsid protein (ORF3) of IHHNV had been over-expressed in bacterial or insect cells and then self-assembled in vitro into virus-like particles (VLPs) and successfully used as a nanocarrier to deliver foreign genes into shrimp cells [
27,
28,
29]. However, the use of VLPs as a gene delivery tool is limited due to the high cost and extensive labor involved in the production of VLPs and the relatively low DNA-loading efficiency.
Suitable packaging cells are essential for a virus-mediated expression system. In consideration of the lack of an immortalized shrimp cell line and the accumulated evidence of the infectivity of several shrimp viruses in insect cells [
30,
31,
32,
33,
34] and the successful propagation of IHHNV in shrimp–insect hybrid cells of PmLyO-Sf9 [
35], in this study, the insect Sf9 cell line was chosen as a packaging cell line for the IHHNV-based expression vector, although electron microscopy evidence on the formation of shrimp viral particles in the infected insect cells has not yet been reported.
This study aims to develop a shrimp virus (IHHNV)-mediated gene transfer and expression system using insect Sf9 cells as packaging cells. To achieve this, the near full-length genomic DNA of shrimp IHHNV had been isolated and then inserted into a prokaryotic pUC19 backbone to obtain the cyclized plasmid of pUC19-IHHNV. After that, an IHHNV-based expression vector was constructed by inserting an expression cassette of PH-GUS-SV40 pA, the baculoviral polyhedron (PH) promoter-driven GUS (β-glucuronidase) gene, into pUC19-IHHNV immediately downstream of IHHNV and then packaged into IHHNV-like viral particles in the insect Sf9 cells by lipofection. And then the gene transfer and expression efficiency of this shrimp IHHNV-mediated expression system were evaluated and further improved in three systems of insect Sf9 cells, shrimp hemolymph cells and adult tissues of infected shrimps via the expression of the GUS reporter gene for proof-of-concept.
3. Discussion
In this study, the genomic DNA of the shrimp IHHNV had been successfully isolated and inserted into a prokaryotic cloning plasmid of pUC19-IHHNV. This made it possible for the genomic DNA of a shrimp virus to be multiplied in bacterial cells. Subsequently, a shrimp IHHNV-based expression vector of pUC19-IHHNV-PH-GUS was constructed by introducing a eukaryotic expression cassette of PH-GUS-MCS-SV40 pA into the aforementioned cyclized plasmid immediately after the IHHNV genome. It was also found that insect Sf9 cells could be used as a packaging cell line for the shrimp IHHNV-based expression vector of pUC19-IHHNV-PH-GUS, as confirmed by the reinfection, transmission electron microscopy and electron microscopy negative staining assays. Shrimp IHHNV-like icosahedral virus particles with a similar size to wild-type IHHNV could be observed both in the Sf9 cells and in the medium supernatant of pUC19-IHHNV-PH-GUS-infected Sf9 cells.
The PH promoter was chosen in the IHHNV-based expression vector of pUC19-IHHNV-PH-GUS because it has a strong activity and can produce high-level protein expression in Sf9 cells, thus proving beneficial for the viral packaging. However, as it is a late-stage promoter of insect baculovirus, its activation is dependent on the expression products of some early genes of baculovirus [
38,
39,
40]. The absence of Bacmid (genetically modified from AcMNPV) might result in the over-expression failure of the PH promoter-driven
GUS gene. As expected, no GUS expression or blue signal could be detected in the single plasmid of the pUC19-IHHNV-PH-GUS-transfected Sf9 cells, but many blue cells could be detected in the co-transfected Sf9 cells by pUC19-IHHNV-PH-GUS and Bacmid (or Bacmid-VP28). Moreover, a significantly higher transfection and expression efficiency was obtained when the baculoviral plasmid of Bacmid-VP28 encoding the shrimp WSSV-sourced envelope protein VP28 was used instead of Bacmid.
It is well known that the host range (i.e., tropism) of an enveloped virus is usually dependent on its outermost envelope proteins, which can recognize and bind the shrimp cell surface receptors and mediate the viral entry into the host cells [
41]. The recombinant baculovirus of Bacmid-VP28 encoded an important envelope protein of VP28 from shrimp white spot syndrome virus (WSSV), which can bind to shrimp cells as an attachment protein and help the virus enter the cytoplasm, and it had been confirmed that the introduction of the VP28 protein into the envelope of pseudo-typed baculovirus, lentivirus and retrovirus could significantly improve their tropism to shrimp cells [
4,
6,
10]. Thus, it can be expected that the baculovirus of Bacmid-VP28 will have higher tropism in shrimp cells than Bacmid. In this study, when the mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid (or Bacmid-VP28) were used to infect the primarily cultured shrimp hemolymph cells, no GUS expression or blue cells could be detected after infection by the mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid, possibly due to the extremely low tropism and infectivity of Bacmid in the shrimp hemolymph cells. Instead of this, obvious blue cells were observed in the shrimp hemolymph cells infected by the mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid-VP28, possibly due to the higher infectivity and cell entry of Bacmid-VP28 in shrimp hemolymph cells. In a word, the infection and GUS expression capability of the mixed viruses could be greatly improved when Bacmid-VP28 was used to replace Bacmid. In addition, the prerequisite for GUS expression was the successful co-infection and cell entry of the two mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid-VP28 into the same shrimp hemolymph cell. However, the co-infection efficiency of the above-mentioned mixed viruses in shrimp hemolymph cells was still unclear and more work is needed on it. Anyway, the use of a higher infection dose should be a better choice to increase the infection and expression efficiency of the mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid-VP28 in the shrimp hemolymph cells.
Unlike shrimp hemolymph cells, both of these two kinds of mixed viruses could infect the adult tissues of most of the injected shrimps with an infection efficiency of 70–80% and in tissue-specific and dose-dependent manners, and this was confirmed by semi-quantitative RT-PCR analysis. One possible reason for the significantly higher infection efficiencies of the above-mentioned two kinds of mixed viruses is the higher dividing capacity of live shrimp tissues in comparison with the in vitro cultured shrimp cells. Of note, unlike the mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid, strong blue signals could be detected not only in the hearts and gills but also in the Oka organs and intestines of the shrimps infected by the mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid-VP28, suggesting the much higher infection and GUS expression capability of the mixed viruses when Bacmid-VP28 was included, confirming that Bacmid-VP28 had much higher infectivity in shrimp tissues than Bacmid did.
In addition, VP28 is the most abundant major envelope protein of WSSV, but it is not the only one. In fact, the WSSV envelope consists of at least 35 different proteins, and more than 23 of them are denoted as envelope proteins (GenBank No. AF332093.3). The high diversity of envelope proteins in WSSV may to a great degree contribute to its wide tissue distribution; in other words, WSSV can be detected in almost all the tissues of the infected shrimps. Thus, we think the introduction of other kinds of WSSV envelope proteins into the recombinant baculovirus might change its tissue-specific tropism and confer a crucial factor to influence the tissue-specific tropism of the above mixed viruses [
42].
Taken together, a shrimp virus (IHHNV)-mediated gene transfer and expression system was successfully developed in this study, which consisted of a shrimp IHHNV-based expression vector of pUC19-IHHNV-PH-GUS, a helper baculovirus of Bacmid-VP28 and one packaging cell line of insect Sf9. This useful research tool for efficient gene transfer and expression in shrimps will greatly promote future works on the molecular breeding of transgenic shrimps with merit traits as well as the immortalization of the in vitro cultured shrimp cells, although it still needs more improvements in terms of the gene delivery efficiency and biosafety assessment, for example, the use of IHHNV with full-length 5′ and 3′ ITR, or the production of replication-defective IHHNV by splitting up of the capsid gene (ORF3) from the IHHNV genomic DNA.
4. Materials and Methods
4.1. Shrimps
Actively swimming shrimps (Metapenaeus ensis), 12 ± 3 cm in length and 15 ± 5 g in weight, were purchased from a local seafood market in Nanshan, Qingdao, China. They were acclimatized in aerated seawater at an ambient temperature of 18–25 °C for at least two days before being used for viral infection and primary cell culture. The infectious hypodermic and hematopoietic necrosis virus (IHHNV)-infected shrimps were sampled from the local shrimp farm in Qingdao, China, immediately frozen and transported in liquid nitrogen to laboratory, and then stored at −80°C until used for the isolation of the genomic DNA of IHHNV. The care and use of the shrimps were performed under supervision and approved by the scientific ethics committee of Ocean University of China.
4.2. Cells and Cell Culture
A continuous insect cell line of Sf9, derived from the ovarian tissues of the pupa of fall army worm, Spondoptera frugiperda, was used for the packaging and titration of the shrimp IHHNV-based recombinant viruses, the baculoviruses of Bacmid (i.e., bMON14272, from the Bac-to-Bac baculovirus expression system, Cat. No. 10360-014, Invitrogen, Carlsbad, CA, USA), Bacmid-GUS encoding β-glucuronidase (GUS), and Bacmid-VP28 encoding the envelope protein (VP28) of shrimp WSSV. The Sf9 cells were maintained in SIM medium (Sino Biological, Beijing, China) supplemented with 10% fetal bovine serum (FBS, Biological Industries, Kibbutz Beit Haemek, Israel, ISR) at 28 °C in a 3% CO2 incubator.
Primarily cultured shrimp hemocytes were isolated from the circulating hemolymph of
M. ensis and then cultured in a 1.5 × L-15-based or gelatin-containing 1.0 × L-15-based growth medium, as described previously by Han et al. [
43] and Zhao et al. [
44], respectively, until used for the infectivity analysis of the shrimp IHHNV-based recombinant viruses or the baculoviruses of Bacmid, Bacmid-GUS and Bacmid-VP28. In brief, the shrimps were pre-treated overnight in aerated boiling-disinfected seawater containing 1200 IU/mL penicillin and 1200 IU/mL streptomycin. Then, the shrimps were individually anesthetized by immersion in 75% ethanol for 3–5 min. Next, after sequential disinfection of the body surface of the shrimps by iodophor (INOHV, Qingdao, China) and 75% ethanol, the circulating hemolymphs were drawn out from the thoracic sinus of the shrimp using a 1 mL aseptic injection syringe preloaded with 200 μL 1.5 × L-15-based shrimp growth medium, then mixed and seeded into a 96-well culture plate (100 μL/well) and cultured at 28 °C in a 3% CO
2 incubator for 4 h. After that, the old medium in each well was replaced with fresh 1.5 × L-15-based or 1 × L-15 gelatin-containing growth medium and cultured until used.
4.3. Cloning and Cyclizing of the Genomic DNA of Shrimp IHHNV
The published full-length genomic DNA of shrimp infectious hypodermic and hematopoietic necrosis virus (IHHNV) was 4.1 kb in size, which had two highly variable inverted terminal repeats (ITR) in both ends. After many attempts, only 3833 bp of the length of the genomic DNA of IHHNV, with shortened ITR in both ends, had been cloned in this study. In detail, the genomic DNA of IHHNV was amplified by PCR in two overlapped fragments, 1–1910 bp and 1870–3833 bp, respectively. In order to link them together, these two fragments had a 40 bp overlap located in position 1870–1910 bp, which served as a homology arm for recombinase-based assembly. The genomic DNA of IHHNV was cyclized by head-to-tail joining with a linearized prokaryotic cloning plasmid of pUC19, which was pre-digested with double restriction endonucleases of Hind III and BamH I. Thus, an IHHNV-containing shuttle plasmid of pUC19-IHHNV was constructed to be used to multiply the genomic DNA of IHHNV in bacteria.
To clone and cyclize the genomic DNA of IHHNV, the anterior fragment of 1–1910 bp was amplified by a forward primer of 5′-TCACACAGGAAACAGCTATGACCATGATTACGCCAAGCTTTCGGAGCGCTTCGCAGGAAACCGTTACAA-3′, which had a 40 bp homologous arm (underlined) in the 5′-end corresponding to the 40 bp sequence in the upstream of the Hind III restriction endonuclease site in the plasmid of pUC19, and a reverse primer of 5′-GCATATTGTCGTAGTCTGGT-3′. The posterior fragment of 1870–3833 bp was amplified by a forward primer of 5′-GTCACTAATTACAAACCTGCAG-3′ and the reverse primer of 5′-AACGACGGCCAGTGAATTCGAGCTCGGTACCCGGGGATCCCTTCGCAGAAACCGTTAAC-3′, which had a 40 bp homologous arm (underlined) in the 5′-end, too, but this homologous arm corresponded to the 40 bp complement sequence in the downstream of the BamH I restriction endonuclease site in the plasmid of pUC19. Finally, the linearized plasmid of pUC19 and the homology arm-carrying IHHNV fragments of 1–1910 bp and 1870–3833 bp were connected head to tail into one cyclized recombinant plasmid of pUC19-IHHNV using a large fragment homologous recombination kit (Gibson Assembly® Ultra Kit, SGI-DNA, CA, USA) according to the manual’s instructions. In brief, a 40 ng anterior fragment, 40 ng posterior fragment and 50 ng linearized pUC19 were first mixed in a 200 μL PCR tube and then 5 μL GA Ultra Master Mix A (2×) was added and mixed again. After that, the mixture was incubated and run under the following PCR program: 37 °C for 5 min, 75 °C for 20 min, and then decreased to 60 °C at a rate of 0.1 °C per second, then 60 °C for 30 min, and finally decreased to 4 °C at a rate of 0.1 °C per second. Next, 10 μL GA Ultra Master Mix B (2×) was added and run at 45 °C for 15 min. Finally, the ligation product was immediately transformed into the T1 competent bacteria cells for the screening and sequencing of positive clones.
4.4. Construction of Shrimp IHHNV-Based Expression Vector of pUC19-IHHNV-PH-GUS
First, an expression cassette of PH-GUS-MCS-SV40 pA, 2383 bp in size, consisting of an insect baculovirus polyhedron (PH) promoter, the GUS (β-glucuronidase) gene, a downstream MCS (multiple cloning site) and the SV40 poly (A) signal (pA), was amplified by a forward primer of 5′-TCTGCGAAGGGATCCATCATGGAGATAATTAAAATGA-3′ and a reverse primer of 5′-AGTGAATTCGAGCTCGATCCAGACATGATAAGAT-3′ using a donor plasmid of pFastBacTM1-GUS as a template. The pFastBacTM1-GUS plasmid was purchased along with the Bac-to-Bac baculovirus expression system (Invitrogen, catalog No. 10359-016 and 10360-014, Carlsbad, CA, USA). For recombinase-based assembly, the above forward primer was augmented with a 15 bp homologous arm in its 5′-end (underlined) corresponding to the 15 bp sequence in the upstream of the BamH I restriction endonuclease site in the plasmid of pUC19-IHHNV, and the above reverse primer was augmented with a 15 bp homologous arm in its 5′-end (underlined), which corresponded to the 15 bp complement sequence in the downstream of the Sac I restriction endonuclease site in the plasmid of pUC19-IHHNV, respectively. Next, to construct the shrimp IHHNV-based expression vector of pUC19-IHHNV-PH-GUS, the homologous arm-containing fragment of PH-GUS-MCS-SV40 pA was inserted into the pUC19-IHHNV vector, which had been linearized by BamH I and Sac I, using a universal homologous recombination kit (Pro Ligation-Free Cloning Kit, ABM Inc., VAN, Vancouver, BC, Canada) according to the manual’s instruction. In brief, the PH-GUS-MCS-SV40 pA fragment, the linearized plasmid of pUC19-IHHNV and 2 × Pro Ligation-Free Mix were mixed and then incubated at 50 °C for 2 h. Then, the ligation product was immediately transformed into DH5α competent bacterial cells for the screening and sequencing of positive clones.
4.5. Viral Packaging
The packaging of pUC19-IHHNV-PH-GUS, Bacmid and Bacmid-GUS were carried out as described previously by Wu et al. [
9] with minor modifications. In brief, Sf9 cells were seeded into a 48-well culture plate at a seeding density of 1 × 10
5 cells/well at about 16 h ahead of transfection, and when the cell confluency reached 70%, the old medium in each well was replaced with a diluted SIM medium containing 13.5% SIM medium, 1.5% FBS and 85% serum-free Grace medium (Gibco, Carlsbad, CA, USA). After that, for each well, a total of 1.875 μL transfection reagent of Cellfectin II (Gibco, Carlsbad, CA, USA) and 0.375 μg viral plasmid DNA were separately diluted in 25 μL serum-free Grace medium in two tubes and incubated at room temperature for 10 min. After that, they were combined and vortexed and incubated at room temperature for another 20–30 min. Next, the liposome–DNA transfection complex was evenly added into the well drop by drop and cultured at 28 °C for 4 h, and then the transfection reagent-containing medium was replaced with normal serum-containing SIM medium. Then, 120 h later, the expression of the
GUS reporter gene was assayed by X-gluc staining (Solarbio, Beijing, China) as described previously by Wu et al. [
9]. The baculoviruses of Bacmid and Bacmid-GUS were chosen as negative and positive controls, respectively, to verify the expression of the
GUS gene of the shrimp virus (IHHNV)-based expression vector of pUC19-IHHNV-PH-GUS in the Sf9 cells. Baculoviral plasmids of Bacmid and Bacmid-GUS were prepared according to the manual’s instruction for the Bac-to-Bac baculovirus expression system (Invitrogen, Carlsbad, CA, USA).
A total of two kinds of mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid (or pUC19-IHHNV-PH-GUS and Bacmid-VP28) were packaged in this study. Compared with the baculovirus of Bacmid, the recombinant baculovirus of Bacmid-VP28 encoded an important envelope protein of VP28 of the shrimp WSSV and thus was reported to have better tropism to shrimp cells [
10]. Before packaging, firstly, the optimal co-transfection ratio of pUC19-IHHNV-PH-GUS to Bacmid was examined in a 48-well culture plate. In consideration of the cytotoxicity of plasmid DNAs, the tested co-transfection ratios of the pUC19-IHHNV-PH-GUS (0.375 μg) to Bacmid were 1:1/3 (0.125 μg), 1:1/2 (0.1875 μg), 1:1 (0.375 μg), 1:2 (0.75 μg) and 1:3 (1.125 μg) using a transfection reagent ratio of 5 μL Cellfectin II per μg DNA, as reported by Wu et al. [
9]. As shown in
Figure 3, it was found that the optimal co-transfection ratios of pUC19-IHHNV-PH-GUS to Bacmid were 1:1 (μg). Secondly, the optimal ratio of transfection reagent to the mixed plasmid DNAs was further examined in a 48-well culture plate with a co-transfection ratio of 1:1 (pUC19-IHHNV-PH-GUS to Bacmid in μg). The tested ratios of the mixed plasmid DNAs (μg) to Cellfectin II (μL) were 1:4, 1:5 and 1:6, respectively, based on the work by Wu et al. [
9].
Finally, the mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid (or pUC19-IHHNV-PH-GUS and Bacmid-VP28) were first packaged under the optimized co-transfection ratio and transfection reagent ratio in a 24-well culture plate. In detail, 1 μg pUC19-IHHNV-PH-GUS, 1 μg Bacmid (or Bacmid-VP28) and 12 μL transfection reagent of Cellfectin II were used in the co-transfection of Sf9 cells. Then, at 120 h post co-transfection, the medium containing detached Sf9 cells and cell debris was collected and then clarified twice by centrifugation at 12,000× g, 4 °C for 15 min, and finally, the medium supernatant of the mixed viruses was saved and used to further infect the Sf9 cells cultured in 10 cm petri dishes by 400 μL viral supernatant per dish for the purpose of the multiplication of the mixed viruses.
4.6. Purification, Concentration and Titration of the Viruses
To purify the single virus of pUC19-IHHNV-PH-GUS, the transfected Sf9 cells were collected by trypsinization and centrifugation at 2000× g, 4 °C for 15 min and then frozen and thawed for three rounds. Next, the lysed cells were resuspended in sterile PBS (8.0 g NaCl, 0.2 g KCl, 0.2 g KH2PO4 and 3 g Na2HPO4·12H2O in 1 L dH2O, pH 7.0) and then clarified twice by centrifugation at 12,000× g, 4 °C for 15 min. Finally, the viral supernatant was collected and concentrated by ultracentrifugation at 140,000× g, 4 °C for 2 h. After ultracentrifugation, the supernatant was discarded and the viral precipitate was resuspended with PBS, aliquoted and stored at −80 °C.
To purify the mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid (or pUC19-IHHNV-PH-GUS and Bacmid-VP28), the medium supernatant was first collected and saved, and then the co-transfected Sf9 cells were collected by trypsinization and centrifugation and then frozen and thawed for three rounds. Next, the lysed cells were resuspended in the saved medium supernatant and then clarified twice by centrifugation at 12,000× g, 4 °C for 15 min. Finally, the viral supernatant was collected and concentrated by ultracentrifugation at 140,000× g, 4 °C for 2 h. After ultracentrifugation, the virus precipitate was collected and resuspended with PBS, aliquoted and stored at −80 °C.
For the viral titration, Sf9 cell monolayers were prepared in a 96-well culture plate at a seeding density of 4 × 10
4 cells per well at 16 h ahead of viral infection. Then, the tested stock solutions of the mixed viruses were serially diluted tenfold, ranging from 10 to 10
7, in serum- and antibiotic-free SIM medium. And then the old medium in each well was removed and 100 μL viral dilutions were added into each well. Five hours post-infection, the old medium was replaced with normal SIM medium. At 120 h post infection, the expression of the
GUS reporter gene was detected by X-gluc staining as described previously by Wu et al. [
9]. The virus titers were calculated by the following formula: TU/mL (transduction units per mL) = percentage of positive cell colonies × total cell numbers seeded/volume of viral stock (mL).
In consideration of the failure of the PH promoter to drive the expression of the
GUS gene in the case of single viral vector transfection, the titration of the single virus of pUC19-IHHNV-PH-GUS was determined by the simultaneous co-transfection and titration of the mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid. The purification, concentration and titration of the single baculoviruses of Bacmid-GUS and Bacmid were carried out as described previously by Wu et al. [
9].
4.7. Verification of the Packaging Capacity of IHHNV-Based Expression Vector of pUC19-IHHNV-PH-GUS into Infective Virions in Sf9 Cells
The successful packaging of the shrimp IHHNV-based expression vector of pUC19-IHHNV-PH-GUS in Sf9 cells was verified by the three methods of reinfection, transmission electron microscopy (TEM) and electron microscopy negative staining assay in this study.
For the reinfection assay, the viral expression plasmid of pUC19-IHHNV-PH-GUS was transfected alone or co-transfected with Bacmid (or Bacmid-VP28) into the Sf9 cells as described previously under the optimized transfection conditions. At 120 h post transfection, the medium supernatant was collected and clarified by centrifugation as described previously and then used to reinfect the Sf9 cells cultured in serum- and antibiotic- free SIM medium by an infection dose of 100 μL medium supernatant tested per well in a 48-well culture plate. The next day, the old medium was replaced with normal SIM medium. At 120 h post infection, the expression of GUS gene was detected by X-gluc staining. The successful detection of the GUS signal can verify the successful packaging of the mature virions of pUC19-IHHNV-PH-GUS in Sf9 cells.
For the TEM and electron microscopy negative staining assay, Sf9 cells were inoculated into a 10 cm petri dish at a density of 6 × 106 cells per dish at 16 h ahead of transfection, and the old medium was replaced with 10 mL of diluted SIM medium containing 1.35 mL SIM, 0.15 mL FBS and 8.5 mL Grace medium when the confluency reached 70%. Then, the plasmids of pUC19-IHHNV-PH-GUS and Bacmid were transfected individually or co-transfected into Sf9 cells using the transfection reagent of Cellfectin II (Gibco, Carlsbad, CA, USA). In brief, in one tube, 15 μg pUC19-IHHNV-PH-GUS plasmid, or 15 μg Bacmid, or a 30 μg mixture of the above two plasmids, and in another tube 90 or 180 μL Cellfectin II, was diluted in 500 μL serum- and antibiotic-free Grace medium, respectively, and incubated at room temperature for 10 min. Then, the two tubes containing DNA or Cellfectin II were combined accordingly, mixed and then incubated at room temperature for another 20–30 min. The transfection complex was added drop by drop into the culture dish and then replaced to normal SIM medium at 4 h post transfection. At 120 h post transfection, the medium supernatant was collected and clarified by centrifugation and used to reinfect the Sf9 cells, which were freshly seeded in another 10 cm petri dish and the medium was replaced with serum- and antibiotic- free SIM medium, with an infection dose of 400 μL medium supernatant per dish. At 120 h post infection, the medium supernatant of the pUC19-IHHNV-PH-GUS-transfected Sf9 cells was collected, clarified and saved at 4 °C for electron microscopy negative staining analysis by Savile Biotechnology (Shanghai, China). Next, two mL of 2.5% glutaraldehyde was added into each dish after the medium has been removed, and the fixed Sf9 cells were removed by a cell scraper and collected by centrifugation. The supernatant was discarded and the cell pellet was carefully resuspended in a new fixative solution and incubated at room temperature for another 30 min and then stored at 4 °C until the TEM assay and photographing by Saville Biotechnology (Shanghai, China).
4.8. Analysis of Infection and GUS Expression of Aforementioned Mixed Viruses in Primarily Cultured Shrimp Hemolymph Cells
The primarily cultured shrimp hemolymph cells in a 96-well culture plate were infected with 100 μL viral solution per well containing 8 × 106 TU viruses of Bacmid (negative control) or pUC19-IHHNV-PH-GUS, or 8 × 106 TU mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid, or 8 × 105 TU mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid-VP28, all diluted in 1.5 × L-15 basic medium. At 4 h post infection, the virus-containing medium was replaced with 1.5 × L-15-based growth medium or gelatin-containing 1 × L-15-based growth medium and cultured at 28 °C for another 120 h. Then, the expression of the GUS gene was detected by X-gluc staining and observed under inverted phase contrast microscope (Nikon, Tokyo, Japan).
4.9. Analysis of Infection and GUS Expression of Aforementioned Mixed Viruses in the Adult Tissues of Shrimps
For the infection and GUS expression of the mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid, firstly, the mixed virus stock solution was serially diluted by 10, 10
2 and 10
3 folds in PBS, respectively, and then injected into the second abdominal segment of the shrimps by three different doses of 7 × 10
4, 7 × 10
5 and 7 × 10
6 TU per shrimp in an injection volume of 10 μL. The control shrimps were injected by the same volume of PBS instead. After injection, the injection site was immediately pressed with the thumb for several seconds to prevent the viruses and hemolymphs from flowing out. After that, the injected shrimp was put back into the seawater and cultured for another 5 days. On the fifth day, various adult tissues of the heart, gill, Oka organ, muscle and intestine of the injected shrimp were dissected out and the expression of
GUS gene was detected by X-gluc staining, as described previously by Wu et al. [
9], respectively. In detail, the tested tissue was placed in a 1.5 mL centrifuge tube after being washed three times in 2 × PBS, and then incubated in the X-Gluc staining solution containing 1 M sodium phosphate (pH 7.0), 0.5 M Na
2EDTA (pH 8.0), 10% Triton X-100, 50 mM K
3Fe (CN)6 and 0.1 M 50 mg/mL X-gluc overnight in a 28 °C incubator, and then the expression of the
GUS gene was detected by the intensity of the blue color. After that, the stained tissues were further photographed under an inverted phase contrast microscope (Nikon, Japan).
For the infection and expression of the mixed viruses of pUC19-IHHNV-PH-GUS and Bacmid-VP28, only one infection dose of 4 × 106 TU per shrimp in the same injection volume of 10 μL was tested and the expression of the GUS gene in the different tissues of the infected shrimps was detected by X-gluc staining as described previously and further confirmed by semi-quantitative RT-PCR analysis using GUS gene-specific primer pairs. For the semi-quantitative RT-PCR analysis, first, the total RNAs of the tested adult tissues of the hearts, gills, Oka organs, muscles and intestines of the infected and uninfected shrimps were isolated using the TransZol Up Plus RNA Kit (TransGen Biotech, Beijing, China) and then reversely transcribed into cDNAs using the PrimeScript™ RT reagent Kit (TaKaRa, Beijing, China), respectively, and used as the RT-PCR templates. Then, a 499 bp cDNA fragment of the GUS gene was amplified using a forward primer of 5′-GCGTTACAAGAAAGCCGGGC-3′ and a reverse primer of 5′-AGTCAACAGACGCGTGGTTA-3′. RT-PCR was performed in a 20 μL reaction volume, including 10 μL of 2× Hieff PCR Master Mix, 1 μL forward primer (10 μM), 1 μL reverse primer (10 μM), 1 μL cDNA template and 7 μL H2O. The RT-PCR reaction was run for 94 °C for 5 min, 30 cycles of 94 °C for 30 s, 58 °C for 30 s and 72 °C for 45 s, one cycle of 72 °C for 10 min. A 438 bp shrimp (P. vannamei) β-actin fragment was amplified using a forward primer of 5′-CCCAGAGCAAGCGAGGTA-3′ and a reverse primer of 5′-CGGTGGTCGTGAAGGTGT-3′ and used as an internal reference.