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27 pages, 10571 KB  
Article
A New Green Pitviper of the Genus Trimeresurus Lacépède, 1804 (Squamata: Viperidae) from Xizang, China
by Yuhao Xu, Tan Van Nguyen, Zhenqi Wang, Tierui Zhang, Nikolay A. Poyarkov, Cong Wei, Gernot Vogel, Jianchuan Li, Jundong Deng, Fanyue Sun, Lifang Peng and Shiyang Weng
Animals 2025, 15(18), 2675; https://doi.org/10.3390/ani15182675 - 12 Sep 2025
Viewed by 1652
Abstract
Species diversity within the green pit vipers of the genus Trimeresurus is likely underestimated. In this study, we describe a new species of Trimeresurus from the Xizang Autonomous Region, China, based on both morphological and molecular evidence. The new species, Trimeresurus pretiosus sp. [...] Read more.
Species diversity within the green pit vipers of the genus Trimeresurus is likely underestimated. In this study, we describe a new species of Trimeresurus from the Xizang Autonomous Region, China, based on both morphological and molecular evidence. The new species, Trimeresurus pretiosus sp. nov., is assigned to the subgenus Viridovipera Malhotra Thorpe. It is distinguished from its congeners by the following combination of morphological characters: (1) first supralabial completely separated from nasal scale; (2) hemipenis short and spinose, reaching the 12th subcaudal when fully everted; (3) small adult size, with a maximum known snout-vent length of 516 mm in males and 512 mm in females; (4) dorsal scales in 19–19–15 rows, weakly keeled except for the outermost rows; (5) 140–143 ventral scales; (6) 56–58 subcaudal scales in males and 54 in females, partially arranged in a single row; (7) iris reddish-brown in males, orange-yellow in females; (8) body uniformly bright grass-green; postocular streak absent or faint white in males, absent in females; (9) ventrolateral stripe consisting of red above and white below and wide in males, only white and narrow in females; (10) ventral surfaces greenish-yellow; (11) tail distinctly reddish-brown dorsally, with the colouration extending from tail base to tip. Molecular analyses based on the mitochondrial 16S, cyt b, and ND4 gene fragments indicate that the new species is genetically divergent from all congeners, with uncorrected p-distances ranging from 5.8% to 12.5% in the cyt b gene and from 6.7% to 11.0% in the ND4 gene. The new species is currently known only from the southern slopes of the central Himalayas in Yadong County, and it represents the second known Viridovipera species from the southern Himalayas. With this discovery, the total number of snake species known from the Xizang Autonomous Region increases to 67, underscoring the importance of continued herpetofaunal surveys in this biogeographically complex region. Full article
(This article belongs to the Section Herpetology)
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21 pages, 1250 KB  
Review
Snakebites in the Central American Region: More Government Attention Required
by Eduardo Alberto Fernandez and Ivan Santiago Fernandez Funez
Trop. Med. Infect. Dis. 2025, 10(8), 225; https://doi.org/10.3390/tropicalmed10080225 - 12 Aug 2025
Viewed by 1256
Abstract
A review was conducted on snakebites in Central America. Information was extracted using the databases of PubMed, SciELO, and LILACS. Information included retrospective studies, case reports, and case series; in this way, valuable information was retrieved from limited sources. The identified studies comprised [...] Read more.
A review was conducted on snakebites in Central America. Information was extracted using the databases of PubMed, SciELO, and LILACS. Information included retrospective studies, case reports, and case series; in this way, valuable information was retrieved from limited sources. The identified studies comprised those discussing envenoming snakebites. Several species were identified, but three of them had major epidemiological features impacting envenoming by snakebites: Bothrops asper, Crotalus simus, and Micrurus sp. Adolescents and young adult males living in rural areas and engaged in agricultural activities were identified as the main victims of snakebites by clinical records. Symptoms of local damage in the bite sites included edema and skin and muscle necrosis. In addition, the cardiovascular system was affected, with symptoms like hypotension, bleeding, and coagulation disorders. Neurotoxicity causing sensitivity and motricity problems was also reported. For El Salvador, accidents caused by Crotalus simus and Micrurus spp. were given more attention due to their greater relevance. The role of Bothrops species was more relevant in the envenoming reported by other countries. Treatment was found to be provided based on antivenoms produced in Costa Rica, and the recovery of the patients depended on the time elapsed between the accident and the initial treatment in the healthcare system. Full article
(This article belongs to the Special Issue Recent Advances in Snakebite Envenoming Research)
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25 pages, 2812 KB  
Article
Dual Proteomics Strategies to Dissect and Quantify the Components of Nine Medically Important African Snake Venoms
by Damien Redureau, Fernanda Gobbi Amorim, Thomas Crasset, Imre Berger, Christiane Schaffitzel, Stefanie Kate Menzies, Nicholas R. Casewell and Loïc Quinton
Toxins 2025, 17(5), 243; https://doi.org/10.3390/toxins17050243 - 13 May 2025
Cited by 1 | Viewed by 1683
Abstract
Snakebite envenoming constitutes a significant global health issue, particularly in Africa, where venomous species such as Echis vipers and Dendroaspis mambas pose substantial risks to human health. This study employs a standardized venomics workflow to comprehensively characterize and comparatively quantify the venom composition [...] Read more.
Snakebite envenoming constitutes a significant global health issue, particularly in Africa, where venomous species such as Echis vipers and Dendroaspis mambas pose substantial risks to human health. This study employs a standardized venomics workflow to comprehensively characterize and comparatively quantify the venom composition of nine medically relevant snake species chosen from among the deadliest in Africa. Utilizing shotgun venom proteomics and venom gland transcriptomics, we report detailed profiles of venom complexity, highlighting the relative abundance of dominant toxin families such as three-finger toxins and Kunitz-type proteins in Dendroaspis, and metalloproteinases and phospholipases A2 in Echis. We delineate here the relative abundance and structural diversity of venom components. Key to our proteomic approach is the implementation of Multi-Enzymatic Limited Digestion (MELD), which improved protein sequence coverage and enabled the identification of rare toxin families such as hyaluronidases and renin-like proteases, by multiplying the overlap of generated peptides and enhancing the characterization of both toxin and non-toxin components within the venoms. The culmination of these efforts resulted in the construction of a detailed toxin database, providing insights into the biological roles and potential therapeutic targets of venom proteins and peptides. The findings here compellingly validate the MELD technique, reinforcing its reproducibility as a valuable characterization approach applied to venomics. This research significantly advances our understanding of venom complexity in African snake species, including representatives of both Viperidae and Elapidae families. By elucidating venom composition and toxin profiles, our study paves the way for the development of targeted therapies aimed at mitigating the morbidity and mortality associated with snakebite envenoming globally. Full article
(This article belongs to the Special Issue Toxins: From the Wild to the Lab)
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21 pages, 3045 KB  
Article
Why Are Some Snakes More Terrifying and What Is Behind the Fear?
by Daniel Frynta, Markéta Janovcová, Hassan Sh Abdirahman Elmi, Iveta Štolhoferová, Veronika Rudolfová, Kateřina Rexová, David Sommer, David Král, Daniel Alex Berti, Eva Landová and Petra Frýdlová
Animals 2025, 15(5), 731; https://doi.org/10.3390/ani15050731 - 4 Mar 2025
Cited by 1 | Viewed by 3480
Abstract
Snakes are stimuli inducing an ancestral fear response in humans and other primates. Certain snakes evoke more subjective fear than others. True vipers are high-fear-eliciting snakes for both African and European respondents. This can be explained by the evolutionary experience of human ancestors [...] Read more.
Snakes are stimuli inducing an ancestral fear response in humans and other primates. Certain snakes evoke more subjective fear than others. True vipers are high-fear-eliciting snakes for both African and European respondents. This can be explained by the evolutionary experience of human ancestors in Africa. The question arises as to how snakes living in the Americas and Australia, with which humans have no evolutionary experience, will be evaluated. While these snakes belong to broader taxonomic groups that have distant relatives in the Old World, they have evolved independently for tens of millions of years. We prepared a set of 32 pictures depicting eight American pit vipers, eight Australian elapids, eight constrictors, and eight colubrids and asked the respondents to rank these stimuli according to the fear these snakes evoke. Here, we show a high cross-cultural agreement between evaluations by African and European respondents. Snakes characterized by a robust body shape, such as American pit vipers, Australian death adders, pythons, and boas, were the most fear-evoking. The body width was the strongest predictor of evoked fear. The contribution of coloration and pattern of the stimulus to the fear response was not proved. This supports the view that the patterns of fear are not dependent on direct experience, but its underlying mechanisms are shared cross-culturally. Full article
(This article belongs to the Special Issue New Insights in Human-Animal Relationship: Emotions and Welfare)
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17 pages, 2714 KB  
Article
Temporal Range Dynamics of the Lataste’s Viper (Vipera latastei Boscá, 1878) in Doñana (Spain): Insights into Anthropogenically Driven Factors
by Rafael Carmona-González, Francisco Carro, Juan Pablo González de la Vega and Fernando Martínez-Freiría
Animals 2024, 14(20), 3025; https://doi.org/10.3390/ani14203025 - 19 Oct 2024
Viewed by 2340
Abstract
Doñana (southern Spain), a region of notable biodiversity richness, is highly threatened by ongoing landscape transformation and climate change. We investigated the local effect of these anthropogenic factors on the temporal range dynamics of Lataste’s viper (Vipera latastei), an Iberian endemic [...] Read more.
Doñana (southern Spain), a region of notable biodiversity richness, is highly threatened by ongoing landscape transformation and climate change. We investigated the local effect of these anthropogenic factors on the temporal range dynamics of Lataste’s viper (Vipera latastei), an Iberian endemic Mediterranean reptile that has apparently become rare over the years in Doñana. Using ecological niche-based models, based on climatic and remote sensing variables, we analyzed historical (1959–1999) and contemporary (2000–2022) records of the species to assess range shifts and identify environmental factors that may influence them. Our results show that V. latastei is mostly restricted to the coastal region of Doñana and that one temperature variable is the most important factor explaining this distribution pattern in both periods. Additional climatic and vegetation variables play a role in its historical distribution, but they become less important in contemporary times, suggesting a niche simplification over time. We found 30.5% of reduction in the species suitable area from historical to contemporary conditions, a reduction that would be even greater (83.37%) in the absence of niche shift. These findings underscore the species’ heightened vulnerability to ongoing environmental changes and highlight the urgent need for targeted conservation strategies. Full article
(This article belongs to the Section Herpetology)
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21 pages, 3252 KB  
Article
Identification and Characterization of Novel Serpentoviruses in Viperid and Elapid Snakes
by Steven B. Tillis, Sarah B. Chaney, Esther E. V. Crouch, Donal Boyer, Kevin Torregrosa, Avishai D. Shuter, Anibal Armendaris, April L. Childress, Denise McAloose, Jean A. Paré, Robert J. Ossiboff and Kenneth J. Conley
Viruses 2024, 16(9), 1477; https://doi.org/10.3390/v16091477 - 17 Sep 2024
Viewed by 2150
Abstract
Viruses in the subfamily Serpentovirinae (order Nidovirales, family Tobaniviridae) can cause significant morbidity and mortality in captive snakes, but documented infections have been limited to snakes of the Boidae, Colubridae, Homalopsidae, and Pythonidae families. Infections can either be [...] Read more.
Viruses in the subfamily Serpentovirinae (order Nidovirales, family Tobaniviridae) can cause significant morbidity and mortality in captive snakes, but documented infections have been limited to snakes of the Boidae, Colubridae, Homalopsidae, and Pythonidae families. Infections can either be subclinical or associated with oral and/or respiratory disease. Beginning in June 2019, a population of over 150 confiscated snakes was screened for serpentovirus as part of a quarantine disease investigation. Antemortem oropharyngeal swabs or lung tissue collected postmortem were screened for serpentovirus by PCR, and 92/165 (56.0%) of snakes tested were positive for serpentovirus. Serpentoviruses were detected in fourteen species of Viperidae native to Asia, Africa, and South America and a single species of Elapidae native to Australia. When present, clinical signs included thin body condition, abnormal behavior or breathing, stomatitis, and/or mortality. Postmortem findings included variably severe inflammation, necrosis, and/or epithelial proliferation throughout the respiratory and upper gastrointestinal tracts. Genetic characterization of the detected serpentoviruses identified four unique viral clades phylogenetically distinct from recognized serpentovirus genera. Pairwise uncorrected distance analysis supported the phylogenetic analysis and indicated that the viper serpentoviruses likely represent the first members of a novel genus in the subfamily Serpentovirinae. The reported findings represent the first documentation of serpentoviruses in venomous snakes (Viperidae and Elapidae), greatly expanding the susceptible host range for these viruses and highlighting the importance of serpentovirus screening in all captive snake populations. Full article
(This article belongs to the Special Issue Virus Discovery, Classification and Characterization)
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19 pages, 3710 KB  
Article
Nanofractionation Analytics for Comparing MALDI-MS and ESI-MS Data of Viperidae Snake Venom Toxins
by Haifeng Xu, Jesse Mastenbroek, Natascha T. B. Krikke, Susan El-Asal, Rama Mutlaq, Nicholas R. Casewell, Julien Slagboom and Jeroen Kool
Toxins 2024, 16(8), 370; https://doi.org/10.3390/toxins16080370 - 21 Aug 2024
Cited by 2 | Viewed by 1981
Abstract
Worldwide, it is estimated that there are 1.8 to 2.7 million cases of envenoming caused by snakebites. Snake venom is a complex mixture of protein toxins, lipids, small molecules, and salts, with the proteins typically responsible for causing pathology in snakebite victims. For [...] Read more.
Worldwide, it is estimated that there are 1.8 to 2.7 million cases of envenoming caused by snakebites. Snake venom is a complex mixture of protein toxins, lipids, small molecules, and salts, with the proteins typically responsible for causing pathology in snakebite victims. For their chemical characterization and identification, analytical methods are required. Reversed-phase liquid chromatography coupled with electrospray ionization mass spectrometry (RP-LC-ESI-MS) is a widely used technique due to its ease of use, sensitivity, and ability to be directly coupled after LC separation. This method allows for the efficient separation of complex mixtures and sensitive detection of analytes. On the other hand, matrix-assisted laser desorption/ionization mass spectrometry (MALDI-MS) is also sometimes used, and though it typically requires additional sample preparation steps, it offers desirable suitability for the analysis of larger biomolecules. In this study, seven medically important viperid snake venoms were separated into their respective venom toxins and measured by ESI-MS. In parallel, using nanofractionation analytics, post-column high-resolution fractionation was used to collect the eluting toxins for further processing for MALDI-MS analysis. Our comparative results showed that the deconvoluted snake venom toxin masses were observed with good sensitivity from both ESI-MS and MALDI-MS approaches and presented overlap in the toxin masses recovered (between 25% and 57%, depending on the venom analyzed). The mass range of the toxins detected in high abundance was between 4 and 28 kDa. In total, 39 masses were found in both the ESI-MS and/or MALDI-MS analyses, with most being between 5 and 9 kDa (46%), 13 and 15 kDa (38%), and 24 and 28 kDa (13%) in size. Next to the post-column MS analyses, additional coagulation bioassaying was performed to demonstrate the parallel post-column assessment of venom activity in the workflow. Most nanofractionated venoms exhibited anticoagulant activity, with three venoms additionally exhibiting toxins with clear procoagulant activity (Bothrops asper, Crotalus atrox, and Daboia russelii) observed post-column. The results of this study highlight the complementarity of ESI-MS and MALDI-MS approaches for characterizing snake venom toxins and provide a complementary overview of defined toxin masses found in a diversity of viper snake venoms. Full article
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24 pages, 7201 KB  
Review
A Guide to the Clinical Management of Vipera Snakebite in Italy
by Matteo Riccardo Di Nicola, Marta Crevani, Ignazio Avella, Anna Cerullo, Jean-Lou C. M. Dorne, Giovanni Paolino and Caterina Zattera
Toxins 2024, 16(6), 255; https://doi.org/10.3390/toxins16060255 - 31 May 2024
Cited by 12 | Viewed by 7058
Abstract
The genus Vipera encompasses most species of medically significant venomous snakes of Europe, with Italy harbouring four of them. Envenomation by European vipers can result in severe consequences, but underreporting and the absence of standardised clinical protocols hinder effective snakebite management. This study [...] Read more.
The genus Vipera encompasses most species of medically significant venomous snakes of Europe, with Italy harbouring four of them. Envenomation by European vipers can result in severe consequences, but underreporting and the absence of standardised clinical protocols hinder effective snakebite management. This study provides an updated, detailed set of guidelines for the management and treatment of Vipera snakebite tailored for Italian clinicians. It includes taxonomic keys for snake identification, insights into viper venom composition, and recommendations for clinical management. Emphasis is placed on quick and reliable identification of medically relevant snake species, along with appropriate first aid measures. Criteria for antivenom administration are outlined, as well as indications on managing potential side effects. While the protocol is specific to Italy, its methodology can potentially be adapted for other European countries, depending on local resources. The promotion of comprehensive data collection and collaboration among Poison Control Centres is advocated to optimise envenomation management protocols and improve the reporting of epidemiological data concerning snakebite at the country level. Full article
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16 pages, 3236 KB  
Article
Unveiling Novel Kunitz- and Waprin-Type Toxins in the Micrurus mipartitus Coral Snake Venom Gland: An In Silico Transcriptome Analysis
by Mónica Saldarriaga-Córdoba, Claudia Clavero-León, Paola Rey-Suarez, Vitelbina Nuñez-Rangel, Ruben Avendaño-Herrera, Stefany Solano-González and Juan F. Alzate
Toxins 2024, 16(5), 224; https://doi.org/10.3390/toxins16050224 - 11 May 2024
Cited by 3 | Viewed by 2370
Abstract
Kunitz-type peptide expression has been described in the venom of snakes of the Viperidae, Elapidae and Colubridae families. This work aimed to identify these peptides in the venom gland transcriptome of the coral snake Micrurus mipartitus. Transcriptomic analysis revealed a high diversity [...] Read more.
Kunitz-type peptide expression has been described in the venom of snakes of the Viperidae, Elapidae and Colubridae families. This work aimed to identify these peptides in the venom gland transcriptome of the coral snake Micrurus mipartitus. Transcriptomic analysis revealed a high diversity of venom-associated Kunitz serine protease inhibitor proteins (KSPIs). A total of eight copies of KSPIs were predicted and grouped into four distinctive types, including short KSPI, long KSPI, Kunitz–Waprin (Ku-WAP) proteins, and a multi-domain Kunitz-type protein. From these, one short KSPI showed high identity with Micrurus tener and Austrelaps superbus. The long KSPI group exhibited similarity within the Micrurus genus and showed homology with various elapid snakes and even with the colubrid Pantherophis guttatus. A third group suggested the presence of Kunitz domains in addition to a whey-acidic-protein-type four-disulfide core domain. Finally, the fourth group corresponded to a transcript copy with a putative 511 amino acid protein, formerly annotated as KSPI, which UniProt classified as SPINT1. In conclusion, this study showed the diversity of Kunitz-type proteins expressed in the venom gland transcriptome of M. mipartitus. Full article
(This article belongs to the Special Issue Transcriptomic and Proteomic Study on Animal Venom: Looking Forward)
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20 pages, 912 KB  
Article
Paradoxical Exception to Island Tameness: Increased Defensiveness in an Insular Population of Rattlesnakes
by William K. Hayes, Carl E. Person, Gerad A. Fox, Julie L. King, Erick Briggs and Eric C. K. Gren
Toxins 2024, 16(3), 157; https://doi.org/10.3390/toxins16030157 - 18 Mar 2024
Cited by 3 | Viewed by 4693
Abstract
Island tameness results largely from a lack of natural predators. Because some insular rattlesnake populations lack functional rattles, presumably the consequence of relaxed selection from reduced predation, we hypothesized that the Santa Catalina Island, California, USA, population of the southern Pacific rattlesnake ( [...] Read more.
Island tameness results largely from a lack of natural predators. Because some insular rattlesnake populations lack functional rattles, presumably the consequence of relaxed selection from reduced predation, we hypothesized that the Santa Catalina Island, California, USA, population of the southern Pacific rattlesnake (Crotalus helleri, which possesses a functional rattle), would exhibit a decrement in defensive behavior relative to their mainland counterparts. Contrary to our prediction, rattlesnakes from the island not only lacked tameness compared to mainland snakes, but instead exhibited measurably greater levels of defensiveness. Island snakes attempted to bite 4.7 times more frequently as we endeavored to secure them by hand, and required 2.1-fold more time to be pinned and captured. When induced to bite a beaker after being grasped, the island snakes also delivered 2.1-fold greater quantities of venom when controlling for body size. The additional venom resulted from 2.1-fold larger pulses of venom ejected from the fangs. We found no effects of duration in captivity (2–36 months), which suggests an absence of long-term habituation of antipredator behaviors. Breeding bird surveys and Christmas bird counts indicated reduced population densities of avian predators on Catalina compared to the mainland. However, historical estimates confirmed that populations of foxes and introduced mammalian predators (cats and pigs) and antagonists (herbivorous ungulates) substantially exceeded those on the mainland in recent centuries, and therefore best explain the paradoxically exaggerated defensive behaviors exhibited by Catalina’s rattlesnakes. These findings augment our understanding of anthropogenic effects on the behaviors of island animals and underscore how these effects can negatively affect human safety. Full article
(This article belongs to the Section Animal Venoms)
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30 pages, 3019 KB  
Review
Potential Biotechnological Applications of Venoms from the Viperidae Family in Central America for Thrombosis
by Jorge Eduardo Chang Estrada, Taissa Nunes Guerrero, Daniel Fernando Reyes-Enríquez, Erica Santos Nardy, Roseane Guimarães Ferreira, Cristian José Ruiz Calderón, Irmgardt A. Wellmann, Kaio Murilo Monteiro Espíndola, Alejandro Ferraz do Prado, Andreimar Martins Soares, Marcos Roberto de Mattos Fontes, Marta Chagas Monteiro and Russolina Benedeta Zingali
Toxins 2024, 16(3), 142; https://doi.org/10.3390/toxins16030142 - 8 Mar 2024
Cited by 1 | Viewed by 3780
Abstract
Central America is home to one of the most abundant herpetofauna in the Americas, occupying only 7% of the continent’s total area. Vipers and lizards are among the most relevant venomous animals in medical practice due to the consequences of envenomation from the [...] Read more.
Central America is home to one of the most abundant herpetofauna in the Americas, occupying only 7% of the continent’s total area. Vipers and lizards are among the most relevant venomous animals in medical practice due to the consequences of envenomation from the bite of these animals. A great diversity of biomolecules with immense therapeutic and biotechnological value is contained in their venom. This paper describes the prominent leading representatives of the family Viperidae, emphasizing their morphology, distribution, habitat, feeding, and venom composition, as well as the biotechnological application of some isolated components from the venom of the animals from these families, focusing on molecules with potential anti-thrombotic action. We present the leading protein families that interfere with blood clotting, platelet activity, or the endothelium pro-thrombotic profile. In conclusion, Central America is an endemic region of venomous animals that can provide many molecules for biotechnological applications. Full article
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12 pages, 2418 KB  
Article
One-Step Affinity Purification of Leucine-Rich α2-Glycoproteins from Snake Sera and Characterization of Their Phospholipase A2-Inhibitory Activities as β-Type Phospholipase A2 Inhibitors
by Ryoichi Shirai, Kana Shibata, Shinobu Fujii, Rikiro Fukunaga and Seiji Inoue
Toxins 2024, 16(3), 126; https://doi.org/10.3390/toxins16030126 - 1 Mar 2024
Cited by 1 | Viewed by 2064
Abstract
Snakes contain three types of phospholipase A2 (PLA2)-inhibitory proteins in their blood, PLIα, β, and γ, which protect them from their own venom, PLA2. PLIβ is the snake ortholog of leucine-rich α2 glycoprotein (LRG). Since autologous cytochrome [...] Read more.
Snakes contain three types of phospholipase A2 (PLA2)-inhibitory proteins in their blood, PLIα, β, and γ, which protect them from their own venom, PLA2. PLIβ is the snake ortholog of leucine-rich α2 glycoprotein (LRG). Since autologous cytochrome c (Cyt c) serves as an endogenous ligand for LRG, in this study, we purified snake LRGs from various snake serum samples using Cyt c affinity chromatography. All purified snake LRGs were found to be dimers linked by disulfide bonds. Laticauda semifasciata and Naja kaouthia LRGs showed no inhibitory activity against L. semifasciata PLA2 and weak inhibitory activity against Gloydius brevicauda basic PLA2. Elaphe climacophora PLIβ had weaker inhibitory activity against G. brevicauda basic PLA2 than G. brevicauda and Elaphe quadrivirgata PLIs, which are abundant in blood and known to neutralize G. brevicauda basic PLA2. Protobothrops flavoviridis LRG showed no inhibitory activity against basic venom PLA2, PL-X, or G. brevicauda basic PLA2. Binding analysis of P. flavoviridis LRG using surface plasmon resonance showed very strong binding to snake Cyt c, followed by that to horse Cyt c, weak binding to yeast Cyt c, and no binding to P. flavoviridis PL-X or BPI/II. We also deduced the amino acid sequences of L. semifasciata and P. flavoviridis LRG by means of cDNA sequencing and compared them with those of other known sequences of PLIs and LRGs. This study concluded that snake LRG can potentially inhibit basic PLA2, but, whether it actually functions as a PLA2-inhibitory protein, PLIβ, depends on the snake. Full article
(This article belongs to the Special Issue Snake Venom: Toxicology and Associated Countermeasures)
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24 pages, 4850 KB  
Article
Phylogeography and Ecological Niche Modeling of the Alashan Pit Viper (Gloydius cognatus; Reptilia, Viperidae) in Northwest China and Adjacent Areas
by Rui Xu, Tatjana N. Dujsebayeva, Dali Chen, Byambasuren Mijidsuren, Feng Xu and Xianguang Guo
Animals 2023, 13(23), 3726; https://doi.org/10.3390/ani13233726 - 1 Dec 2023
Cited by 4 | Viewed by 2414
Abstract
The joint impacts of historical geological events and Quaternary climatic oscillations in Northwest China on species evolution have been examined extensively in plant under a phylogeographic perspective. However, animal phylogeographic analyses in this region are still limited. The Alashan pit viper, Gloydius cognatus [...] Read more.
The joint impacts of historical geological events and Quaternary climatic oscillations in Northwest China on species evolution have been examined extensively in plant under a phylogeographic perspective. However, animal phylogeographic analyses in this region are still limited. The Alashan pit viper, Gloydius cognatus, occurs primarily in arid Northwest China and adjacent areas. Based on variation at two mtDNA genes (ND4 and Cytb) in 27 individuals representing 24 populations, the spatial genetic structure and demographic history of G. cognatus were examined across its geographic range. Phylogenetic analyses revealed two well-supported allopatric clades (each with two distinct subclades/lineages), distributed across the southern (Qaidam Basin, Lanzhou Basin, and Zoige Basin [S1]; Loess Plateau [S2]) and northern (Ily Basin [N1]; Junggar Basin and Mongolian Plateau [N2]) regions. AMOVA analysis demonstrated that over 76% of the observed genetic variation was related to these lineage splits, indicating substantial genetic differentiation among the four lineages. A strong pattern of isolation-by-distance across the sampling populations suggested that geographic distance principally shaped the genetic structure. The four lineages diverged by 0.9–2.2% for the concatenated data, which were estimated to have coalesced ~1.17 million years ago (Mya), suggesting that the expansions of the Badain Jaran, Tengger, and Mu Us deserts during the Xixiabangma glaciation likely interrupted gene flow and triggered the observed divergence in the southern and northern regions. Subsequently, the early Pleistocene integration of the Yellow River and associated deserts expansion promoted the differentiation of S1 and S2 lineages (~0.9 Mya). Both mitochondrial evidence and ecological niche modeling (ENM) reject the signature of demographic and range contractions during the LGM for G. cognatus. In addition, ENM predicts that the suitable habitat of G. cognatus will contract in the future. As such, the conservation and management of ESUs should be a priority. Our findings provide the first insights on the lineage diversification and population dynamics of the Alashan pit viper in relation to geological history and Pleistocene climatic oscillations in arid Northwest China. Full article
(This article belongs to the Special Issue Evolution, Diversity, and Conservation of Herpetofauna)
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18 pages, 4636 KB  
Systematic Review
Knowledge about Snake Venoms and Toxins from Colombia: A Systematic Review
by Jaime Andrés Pereañez, Lina María Preciado and Paola Rey-Suárez
Toxins 2023, 15(11), 658; https://doi.org/10.3390/toxins15110658 - 15 Nov 2023
Cited by 3 | Viewed by 4362
Abstract
Colombia encompasses three mountain ranges that divide the country into five natural regions: Andes, Pacific, Caribbean, Amazon, and Orinoquia. These regions offer an impressive range of climates, altitudes, and landscapes, which lead to a high snake biodiversity. Of the almost 300 snake species [...] Read more.
Colombia encompasses three mountain ranges that divide the country into five natural regions: Andes, Pacific, Caribbean, Amazon, and Orinoquia. These regions offer an impressive range of climates, altitudes, and landscapes, which lead to a high snake biodiversity. Of the almost 300 snake species reported in Colombia, nearly 50 are categorized as venomous. This high diversity of species contrasts with the small number of studies to characterize their venom compositions and natural history in the different ecoregions. This work reviews the available information about the venom composition, isolated toxins, and potential applications of snake species found in Colombia. Data compilation was conducted according to the PRISMA guidelines, and the systematic literature search was carried out in Pubmed/MEDLINE. Venom proteomes from nine Viperidae and three Elapidae species have been described using quantitative analytical strategies. In addition, venoms of three Colubridae species have been studied. Bioactivities reported for some of the venoms or isolated components—such as antibacterial, cytotoxicity on tumoral cell lines, and antiplasmodial properties—may be of interest to develop potential applications. Overall, this review indicates that, despite recent progress in the characterization of venoms from several Colombian snakes, it is necessary to perform further studies on the many species whose venoms remain essentially unexplored, especially those of the poorly known genus Micrurus. Full article
(This article belongs to the Section Animal Venoms)
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16 pages, 2115 KB  
Article
Evolution of Three-Finger Toxin Genes in Neotropical Colubrine Snakes (Colubridae)
by Kristy Srodawa, Peter A. Cerda, Alison R. Davis Rabosky and Jenna M. Crowe-Riddell
Toxins 2023, 15(9), 523; https://doi.org/10.3390/toxins15090523 - 25 Aug 2023
Cited by 5 | Viewed by 2914
Abstract
Snake venom research has historically focused on front-fanged species (Viperidae and Elapidae), limiting our knowledge of venom evolution in rear-fanged snakes across their ecologically diverse phylogeny. Three-finger toxins (3FTxs) are a known neurotoxic component in the venoms of some rear-fanged snakes (Colubridae: Colubrinae), [...] Read more.
Snake venom research has historically focused on front-fanged species (Viperidae and Elapidae), limiting our knowledge of venom evolution in rear-fanged snakes across their ecologically diverse phylogeny. Three-finger toxins (3FTxs) are a known neurotoxic component in the venoms of some rear-fanged snakes (Colubridae: Colubrinae), but it is unclear how prevalent 3FTxs are both in expression within venom glands and more broadly among colubrine species. Here, we used a transcriptomic approach to characterize the venom expression profiles of four species of colubrine snakes from the Neotropics that were dominated by 3FTx expression (in the genera Chironius, Oxybelis, Rhinobothryum, and Spilotes). By reconstructing the gene trees of 3FTxs, we found evidence of putative novel heterodimers in the sequences of Chironius multiventris and Oxybelis aeneus, revealing an instance of parallel evolution of this structural change in 3FTxs among rear-fanged colubrine snakes. We also found positive selection at sites within structural loops or “fingers” of 3FTxs, indicating these areas may be key binding sites that interact with prey target molecules. Overall, our results highlight the importance of exploring the venoms of understudied species in reconstructing the full evolutionary history of toxins across the tree of life. Full article
(This article belongs to the Special Issue Venom Genes and Genomes of Venomous Animals: Evolution and Variation)
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