Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

Article Types

Countries / Regions

Search Results (51)

Search Parameters:
Keywords = bayberry

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
17 pages, 3759 KB  
Article
Genome-Wide Identification of SWEET Genes and Expression Dynamics of MrSWEET15 During Fruit Ripening in Chinese Bayberry (Morella rubra)
by Jianfeng Liang, Wenjie Chen, Junjie Tao, Keyuan Duan, Jida Zhou, Zhiyu Yin, Jie Song, Zhongshan Gao, Chunhui Huang and Huimin Jia
Horticulturae 2025, 11(11), 1343; https://doi.org/10.3390/horticulturae11111343 - 8 Nov 2025
Viewed by 331
Abstract
Sugar transporters of the SWEET family play a crucial role in sugar partitioning and fruit quality, yet their functions remain uncharacterized in Chinese bayberry (Morella rubra). In this study, we present the first genome-wide identification and characterization of the SWEET gene [...] Read more.
Sugar transporters of the SWEET family play a crucial role in sugar partitioning and fruit quality, yet their functions remain uncharacterized in Chinese bayberry (Morella rubra). In this study, we present the first genome-wide identification and characterization of the SWEET gene family in species, revealing 15 MrSWEET genes distributed across eight chromosomes. Phylogenetic analysis classified these genes into four conserved clades with distinct tissue-specific expression patterns. During fruit ripening, transcripts of MrSWEET1, 2b, 4, and 15 accumulated progressively, with MrSWEET15 showing the strongest increase. Weighted gene co-expression network analysis (WGCNA) identified a “lightcyan” module that correlates strongly with fruit sugar content (r > 0.8) and contains MrSWEET15, three additional MrSWEET genes, and 47 transcription factors (Dof, MYB, NAC, ERF, MADS, WRKY). Promoter analysis of MrSWEET15 revealed the presence of light- and hormone-responsive cis-elements (MYB, MYC, HY5, bZIP, and Dof), and MYB1, HY5, and Dof1.5 expression profiles are synchronized with MrSWEET15, suggesting potential regulatory relationships. These findings establish MrSWEET15 as a priority candidate for sugar transport in Chinese bayberry and our understanding of the molecular basis of sugar transport and fruit quality formation. Full article
(This article belongs to the Special Issue New Insights into Breeding and Genetic Improvement of Fruit Crops)
Show Figures

Figure 1

19 pages, 2933 KB  
Article
Image-Based Detection of Chinese Bayberry (Myrica rubra) Maturity Using Cascaded Instance Segmentation and Multi-Feature Regression
by Hao Zheng, Li Sun, Yue Wang, Han Yang and Shuwen Zhang
Horticulturae 2025, 11(10), 1166; https://doi.org/10.3390/horticulturae11101166 - 1 Oct 2025
Viewed by 409
Abstract
The accurate assessment of Chinese bayberry (Myrica rubra) maturity is critical for intelligent harvesting. This study proposes a novel cascaded framework combining instance segmentation and multi-feature regression for accurate maturity detection. First, a lightweight SOLOv2-Light network is employed to segment each [...] Read more.
The accurate assessment of Chinese bayberry (Myrica rubra) maturity is critical for intelligent harvesting. This study proposes a novel cascaded framework combining instance segmentation and multi-feature regression for accurate maturity detection. First, a lightweight SOLOv2-Light network is employed to segment each fruit individually, which significantly reduces computational costs with only a marginal drop in accuracy. Then, a multi-feature extraction network is developed to fuse deep semantic, color (LAB space), and multi-scale texture features, enhanced by a channel attention mechanism for adaptive weighting. The maturity ground truth is defined using the a*/b* ratio measured by a colorimeter, which correlates strongly with anthocyanin accumulation and visual ripeness. Experimental results demonstrated that the proposed method achieves a mask mAP of 0.788 on the instance segmentation task, outperforming Mask R-CNN and YOLACT. For maturity prediction, a mean absolute error of 3.946% is attained, which is a significant improvement over the baseline. When the data are discretized into three maturity categories, the overall accuracy reaches 95.51%, surpassing YOLOX-s and Faster R-CNN by a considerable margin while reducing processing time by approximately 46%. The modular design facilitates easy adaptation to new varieties. This research provides a robust and efficient solution for in-field bayberry maturity detection, offering substantial value for the development of automated harvesting systems. Full article
Show Figures

Figure 1

28 pages, 19915 KB  
Article
Comprehensive Analysis of Hormonal Signaling Pathways and Gene Expression in Flesh Segment Development of Chinese Bayberry (Myrica rubra)
by Yihan Fu, Shuwen Zhang, Li Yang, Yu Zong, Yongqiang Li, Xingjiang Qi, Wenrong Chen, Fanglei Liao and Weidong Guo
Plants 2025, 14(4), 571; https://doi.org/10.3390/plants14040571 - 13 Feb 2025
Cited by 1 | Viewed by 1464
Abstract
Chinese bayberry (Myrica rubra or Morella rubra) is a valuable fruit, yet the mechanism of its flesh segment development is not well understood. Using paraffin sectioning, we investigated the flower buds of the ‘Biqi’ and ‘Zaojia’ varieties, revealing that the flesh [...] Read more.
Chinese bayberry (Myrica rubra or Morella rubra) is a valuable fruit, yet the mechanism of its flesh segment development is not well understood. Using paraffin sectioning, we investigated the flower buds of the ‘Biqi’ and ‘Zaojia’ varieties, revealing that the flesh segment development in these Chinese bayberry varieties involved the formation of a primordium outside the ovary wall, the establishment of a simple columnar structure, and the formation of the primary flesh segment. Assessment of endogenous hormone levels indicated the significant reductions in jasmonic acid (JA) and indole-3-acetic acid (IAA) levels at the critical stages of flesh segment development. Correlation analysis highlighted the essential roles of IAA, JA, abscisic acid (ABA), and gibberellins in the flesh segment developmental process, underscoring the complex interactions driven primarily by the IAA, JA, and ABA networks. Gene modules positively correlated with flesh segment development were identified using transcriptome-based weighted gene co-expression network analysis (WGCNA). Differentially expressed genes (DEGs) were enriched in plant hormone signal transduction pathways, particularly for upregulated genes associated with auxin and JA signaling. Key genes predicted to be involved in flesh segment development included LAX2 and LAX3 (auxin transport), JAZ6 (JA signaling repression), and KAN1 and KAN4 (regulating multiple hormonal signaling pathways). Quantitative real-time polymerase chain reaction (qRT-PCR) validation confirmed that the expression trends for these genes were consistent across both varieties, particularly for CRC, SEP1, SEP3, IAA7, and JAZ6. Immunofluorescence localization studies revealed that auxin was primarily distributed in the central vascular bundle and outer cells of the flesh segment. This uneven auxin distribution might contribute to the unique morphology of flesh segments. Overall, this study provides insights into the hormonal regulation and genetic factors involved in the development of Chinese bayberry flesh segments. Full article
(This article belongs to the Section Plant Development and Morphogenesis)
Show Figures

Figure 1

20 pages, 3625 KB  
Article
Effects of Low-Allergen Wheat and Bayberry Leaf on Wheat Bread: A Comparison with Commercial Wheat
by Yoko Tsurunaga and Eishin Morita
Foods 2025, 14(3), 364; https://doi.org/10.3390/foods14030364 - 23 Jan 2025
Viewed by 1253
Abstract
Gliadin and glutenin wheat proteins are major food allergens. The allergenicity of various wheat products, such as bread, can be reduced by substituting flour with plant-derived tannins. Here, we investigated a technique for reducing the allergenicity of wheat by utilizing the properties of [...] Read more.
Gliadin and glutenin wheat proteins are major food allergens. The allergenicity of various wheat products, such as bread, can be reduced by substituting flour with plant-derived tannins. Here, we investigated a technique for reducing the allergenicity of wheat by utilizing the properties of proanthocyanidins (PAs), which strongly bind to proteins. We compared commercial bread wheat (BW), low-allergen wheat (1BS-18 “Minamino Kaori”; 1BS-18M), and bayberry leaves (BBLs). Allergenicity was investigated through enzyme-linked immunosorbent assays (ELISAs) and Western blotting (WB). The immunoreactivity of wheat allergens in both BW and 1BS-18M decreased in a concentration-dependent manner with BBL substitution, and the effect was greatest at 10%. The antioxidative properties also increased with BBL substitution, and the highest antioxidative property was observed at 10%. The specific volumes of both BW and 1BS-18M decreased while the a* value (green to red) increased with increasing BBL substitution. In contrast, no significant differences were observed in the texture of breads with 0% (control), 3%, or 5% BBL substitution. However, 10% BBL substitution led to a significant (p < 0.05) reduction in the texture of the bread. Therefore, 5% BBL substitution is optimal for achieving low allergenicity and improved antioxidative properties while maintaining quality. Full article
(This article belongs to the Special Issue Allergens in Food: Identification, Detection, and Mitigation)
Show Figures

Figure 1

19 pages, 19816 KB  
Article
Ethylene-Induced Postharvest Changes in Five Chinese Bayberry Cultivars Affecting the Fruit Ripening and Shelf Life
by Mostafa Saeed, Lan Zhao, Ahmed K. Rashwan, Ahmed I. Osman, Zhuyun Chen, Guoyun Wang, Chaochao Zhou, Ting Tu, Ahmed Alabd, Yun Jiao and Zhongshan Gao
Horticulturae 2024, 10(11), 1144; https://doi.org/10.3390/horticulturae10111144 - 28 Oct 2024
Cited by 3 | Viewed by 2854
Abstract
Ethylene is an essential indicator of fruit ripening and climacteric or non-climacteric nature. This study investigated the postharvest behavior of five Chinese bayberry cultivars ‘Biqi’, ‘Dongkui’, ‘Fenhong’, ‘Xiazhihong’, and ‘Shuijing’. The fruits were harvested mature and stored at room temperature (25 °C) and [...] Read more.
Ethylene is an essential indicator of fruit ripening and climacteric or non-climacteric nature. This study investigated the postharvest behavior of five Chinese bayberry cultivars ‘Biqi’, ‘Dongkui’, ‘Fenhong’, ‘Xiazhihong’, and ‘Shuijing’. The fruits were harvested mature and stored at room temperature (25 °C) and under cold storage conditions (4 °C) to investigate the dynamics of ethylene production, firmness, anthocyanin content, and cell wall polysaccharide composition, as well as basic fruit physicochemical characteristics. The results show that Chinese bayberry is a climacteric fruit with ethylene production peaking shortly after harvest, especially at room temperature. Fruit color intensified over time due to anthocyanin accumulation, particularly in the flesh core. Darker cultivars produced more ethylene, which correlated with higher anthocyanin levels. At room temperature, ‘Biqi’ (black) had the highest ethylene production (4.03 µL·kg−1·h−1) and anthocyanin content (0.91 mg/g FW), while ‘Shuijing’, the white cultivar, had the lowest ethylene levels (1.9 µL·kg−1·h−1) and anthocyanin content (0.03 mg/g FW). Firmness significantly decreased at room temperature due to the degradation of hemicellulose and insoluble pectin, whereas cold storage mitigates this effect. After 3 days at room temperature, the average of firmness decreased by 23.7% in the five cultivars, compared to 12.7% under cold storage. Total soluble solids increase during storage, enhancing sweetness, especially at room temperature, with ‘Biqi’ increasing from 9.2 to 10.9% at 4 °C. Titratable acidity slightly decreased over time: the value for ‘Biqi’ decreased from 1.2% to 0.95% at room temperature and 1.1% at 4 °C. Citric, malic, and tartaric acid generally declined at room temperature but stabilized under cold storage. Sucrose, fructose, and glucose increased or remained stable, with significant varietal differences. Our results indicate that storing Chinese bayberry at 4 °C effectively preserves its quality and extends postharvest life. These findings underscore ethylene’s key role in regulating ripening, postharvest quality, and shelf life by influencing fruit color, firmness, and overall consumer appeal. Full article
Show Figures

Graphical abstract

21 pages, 12493 KB  
Article
Chinese Bayberry Detection in an Orchard Environment Based on an Improved YOLOv7-Tiny Model
by Zhenlei Chen, Mengbo Qian, Xiaobin Zhang and Jianxi Zhu
Agriculture 2024, 14(10), 1725; https://doi.org/10.3390/agriculture14101725 - 1 Oct 2024
Cited by 3 | Viewed by 1517
Abstract
The precise detection of Chinese bayberry locations using object detection technology is a crucial step to achieve unmanned harvesting of these berries. Because of the small size and easy occlusion of bayberry fruit, the existing detection algorithms have low recognition accuracy for such [...] Read more.
The precise detection of Chinese bayberry locations using object detection technology is a crucial step to achieve unmanned harvesting of these berries. Because of the small size and easy occlusion of bayberry fruit, the existing detection algorithms have low recognition accuracy for such objects. In order to realize the fast and accurate recognition of bayberry in fruit trees, and then guide the robotic arm to carry out accurate fruit harvesting, this paper proposes a detection algorithm based on an improved YOLOv7-tiny model. The model introduces partial convolution (PConv), a SimAM attention mechanism and SIoU into YOLOv7-tiny, which enables the model to improve the feature extraction capability of the target without adding extra parameters. Experimental results on a self-built Chinese bayberry dataset demonstrate that the improved algorithm achieved a recall rate of 97.6% and a model size of only 9.0 MB. Meanwhile, the precision of the improved model is 88.1%, which is 26%, 2.7%, 4.7%, 6.5%, and 4.7% higher than that of Faster R-CNN, YOLOv3-tiny, YOLOv5-m, YOLOv6-n, and YOLOv7-tiny, respectively. In addition, the proposed model was tested under natural conditions with the five models mentioned above, and the results showed that the proposed model can more effectively reduce the rates of misdetections and omissions in bayberry recognition. Finally, the improved algorithm was deployed on a mobile harvesting robot for field harvesting experiments, and the practicability of the algorithm was further verified. Full article
Show Figures

Figure 1

15 pages, 9516 KB  
Article
Genome-Wide Identification and Expression Analysis of GST Genes during Light-Induced Anthocyanin Biosynthesis in Mango (Mangifera indica L.)
by Shiqing Yuan, Chengkun Yang, Bin Zheng, Junbei Ni, Kaibing Zhou, Minjie Qian and Hongxia Wu
Plants 2024, 13(19), 2726; https://doi.org/10.3390/plants13192726 - 29 Sep 2024
Cited by 3 | Viewed by 2009
Abstract
Anthocyanins are important secondary metabolites contributing to the red coloration of fruits, the biosynthesis of which is significantly affected by light. Glutathione S-transferases (GSTs) play critical roles in the transport of anthocyanins from the cytosol to the vacuole. Despite their importance, GST genes [...] Read more.
Anthocyanins are important secondary metabolites contributing to the red coloration of fruits, the biosynthesis of which is significantly affected by light. Glutathione S-transferases (GSTs) play critical roles in the transport of anthocyanins from the cytosol to the vacuole. Despite their importance, GST genes in mango have not been extensively characterized. In this study, 62 mango GST genes were identified and further divided into six subfamilies. MiGSTs displayed high similarity in their exon/intron structure and motif and domain composition within the same subfamilies. The mango genome harbored eleven pairs of segmental gene duplications and ten sets of tandemly duplicated genes. Orthologous analysis identified twenty-nine, seven, thirty-four, and nineteen pairs of orthologous genes among mango MiGST genes and their counterparts in Arabidopsis, rice, citrus, and bayberry, respectively. Tissue-specific expression profiling highlighted tissue-specific expression patterns for MiGST genes. RNA-seq and qPCR analyses revealed elevated expression levels of seven MiGSTs including MiDHAR1, MiGSTU7, MiGSTU13, MiGSTU21, MiGSTF3, MiGSTF8, and MiGSTF9 during light-induced anthocyanin accumulation in mango. This study establishes a comprehensive genetic framework of MiGSTs in mango fruit and their potential roles in regulating anthocyanin accumulation, which is helpful in developing GST-derived molecular markers and speeding up the process of breeding new red-colored mango cultivars. Full article
(This article belongs to the Special Issue Bioinformatics and Functional Genomics in Modern Plant Science)
Show Figures

Figure 1

16 pages, 2943 KB  
Article
Transcription-Associated Metabolomic Analysis Reveals the Mechanism of Fruit Ripening during the Development of Chinese Bayberry
by Li Sun, Shuwen Zhang, Zheping Yu, Xiliang Zheng, Senmiao Liang, Haiying Ren and Xingjiang Qi
Int. J. Mol. Sci. 2024, 25(16), 8654; https://doi.org/10.3390/ijms25168654 - 8 Aug 2024
Cited by 3 | Viewed by 1720
Abstract
The ripening process of Chinese bayberries (Myrica rubra) is intricate, involving a multitude of molecular interactions. Here, we integrated transcriptomic and metabolomic analysis across three developmental stages of the Myrica rubra (M. rubra) to elucidate these processes. A differential [...] Read more.
The ripening process of Chinese bayberries (Myrica rubra) is intricate, involving a multitude of molecular interactions. Here, we integrated transcriptomic and metabolomic analysis across three developmental stages of the Myrica rubra (M. rubra) to elucidate these processes. A differential gene expression analysis categorized the genes into four distinct groups based on their expression patterns. Gene ontology and pathway analyses highlighted processes such as cellular and metabolic processes, including protein and sucrose metabolism. A metabolomic analysis revealed significant variations in metabolite profiles, underscoring the dynamic interplay between genes and metabolites during ripening. Flavonoid biosynthesis and starch and sucrose metabolism were identified as key pathways, with specific genes and metabolites playing crucial roles. Our findings provide insights into the molecular mechanisms governing fruit ripening in M. rubra and offer potential targets for breeding strategies aimed at enhancing fruit quality. Full article
(This article belongs to the Special Issue Power Up Plant Genetic Research with Genomic Data 2.0)
Show Figures

Figure 1

16 pages, 2468 KB  
Article
Optimization of Enzymolysis Modification Conditions of Dietary Fiber from Bayberry Pomace and Its Structural Characteristics and Physicochemical and Functional Properties
by Zhaolin Zhang, Qin Ruan, Xiaoming Sun and Jianfeng Yuan
Molecules 2024, 29(14), 3415; https://doi.org/10.3390/molecules29143415 - 21 Jul 2024
Cited by 5 | Viewed by 1865
Abstract
Bayberry pomace, a nutrient-rich material abundant in dietary fiber (DF), has historically been underutilized due to a lack of thorough research. This study aimed to investigate the physicochemical and functional properties of the DF. Ultrasonic enzymatic treatment was performed to extract the total [...] Read more.
Bayberry pomace, a nutrient-rich material abundant in dietary fiber (DF), has historically been underutilized due to a lack of thorough research. This study aimed to investigate the physicochemical and functional properties of the DF. Ultrasonic enzymatic treatment was performed to extract the total DF, which was then optimized to produce modified soluble dietary fiber (MSDF) and insoluble dietary fiber (MIDF). The optimized conditions yielded 15.14% of MSDF with a water-holding capacity (WHC) of 54.13 g/g. The DFs were evaluated for their structural, physicochemical, and functional properties. The MSDF showed a higher (p < 0.05) WHC, oil-holding capacity (OHC), swelling capacity (SC), cation exchange capacity (CEC), and glucose adsorption capacity (GAC) (about 14.15, 0.88, 1.23, 1.22, and 0.34 times) compared to the DF. Additionally, the MSDF showed strong, superior radical scavenging and blood sugar-lowering capabilities, with a more porous surface morphology. A Fourier-transform infrared (FT-IR) spectroscopy analysis indicated that enzymatic modification degraded the cellulose and hemicellulose, reducing the DF crystallinity. Overall, the results demonstrated that cellulase hydrolysis could effectively improve the physicochemical and functional properties of DF, thereby paving the way for its development into functional food products. Full article
(This article belongs to the Special Issue Food Polysaccharides: Structure, Properties and Application II)
Show Figures

Figure 1

18 pages, 7405 KB  
Article
Effect of Addition of Tannin Extract from Underutilized Resources on Allergenic Proteins, Color and Textural Properties of Egg White Gels
by Yoko Tsurunaga, Mika Ishigaki, Tetsuya Takahashi, Shiori Arima, Sae Kumagai, Yoshimasa Tsujii and Shota Koyama
Int. J. Mol. Sci. 2024, 25(7), 4124; https://doi.org/10.3390/ijms25074124 - 8 Apr 2024
Cited by 2 | Viewed by 2802
Abstract
Tannins, present in numerous plants, exhibit a binding affinity for proteins. In this study, we aimed to exploit this property to reduce the concentration of allergenic egg white proteins. Tannins were extracted, using hot water, from the lyophilized powder of underutilized resources, such [...] Read more.
Tannins, present in numerous plants, exhibit a binding affinity for proteins. In this study, we aimed to exploit this property to reduce the concentration of allergenic egg white proteins. Tannins were extracted, using hot water, from the lyophilized powder of underutilized resources, such as chestnut inner skin (CIS), young persimmon fruit (YPF), and bayberry leaves (BBLs). These extracts were then incorporated into an egg white solution (EWS) to generate an egg white gel (EWG). Allergen reduction efficacy was assessed using electrophoresis and ELISA. Our findings revealed a substantial reduction in allergenic proteins across all EWGs containing a 50% tannin extract. Notably, CIS and BBL exhibited exceptional efficacy in reducing low allergen levels. The addition of tannin extract resulted in an increase in the total polyphenol content of the EWG, with the order of effectiveness being CIS > YPF > BBL. Minimal color alteration was observed in the BBL-infused EWG compared to the other sources. Additionally, the introduction of tannin extract heightened the hardness stress, with BBL demonstrating the most significant effect, followed by CIS and YPF. In conclusion, incorporating tannin extract during EWG preparation was found to decrease the concentration of allergenic proteins while enhancing antioxidant properties and hardness stress, with BBL being particularly effective in preventing color changes in EWG. Full article
Show Figures

Figure 1

14 pages, 5742 KB  
Article
Research on the Preparation of Wood Adhesive Active Fillers from Tannin-/Bentonite-Modified Corn Cob
by Linfeng Yang, Haiyang Quan, Jiajun Ji, Haizhe Zhang and Fengwen Sun
Forests 2024, 15(4), 604; https://doi.org/10.3390/f15040604 - 27 Mar 2024
Cited by 3 | Viewed by 2356
Abstract
The artificial plywood industry in our country relies heavily on industrial flour as a filler for adhesives. Using abundant corn cob powder as the main raw material, corn cob powder was modified by impregnation with a sodium-based bentonite/bayberry tannin and used as filler [...] Read more.
The artificial plywood industry in our country relies heavily on industrial flour as a filler for adhesives. Using abundant corn cob powder as the main raw material, corn cob powder was modified by impregnation with a sodium-based bentonite/bayberry tannin and used as filler for urea–formaldehyde resin (UF) adhesive, with NH4Cl as the curing agent and poplar veneer as the raw material to prepare plywood. The results showed that the modified corn cob powder with a particle size of 250 mesh was uniformly dispersed in the UF adhesive. When used as a filler, the modified corn cob powder effectively prevented the premature curing of the UF adhesive and significantly reduced its viscosity. Compared with flour filler, the bonding strength of the prepared plywood increased by 12.1%–19.6% while the formaldehyde emission decreased by 12.7%–27.8%. The cold pressing performance of the plywoods prepared with modified corn cob flour was comparable to the performance of plywood produced with industrial flour. Full article
Show Figures

Figure 1

15 pages, 9374 KB  
Article
Genome-Wide Identification and Expression Analysis of Beta-Galactosidase Family Members in Chinese Bayberry (Myrica rubra)
by Li Sun, Qinpei Yu, Shuwen Zhang, Zheping Yu, Senmiao Liang, Xiliang Zheng, Haiying Ren and Xingjiang Qi
Horticulturae 2024, 10(3), 225; https://doi.org/10.3390/horticulturae10030225 - 26 Feb 2024
Cited by 3 | Viewed by 1852
Abstract
Fruit development and softening play pivotal roles in determining fruit quality and post-harvest shelf life in Chinese bayberry (Myrica rubra). However, the specific role of beta (β)-galactosidase, particularly β-galactosidase of M. rubra (MrBGAL), in facilitating fruit softening remains unclear. [...] Read more.
Fruit development and softening play pivotal roles in determining fruit quality and post-harvest shelf life in Chinese bayberry (Myrica rubra). However, the specific role of beta (β)-galactosidase, particularly β-galactosidase of M. rubra (MrBGAL), in facilitating fruit softening remains unclear. In this study, we aimed to address this gap by investigating the involvement of MrBGALs genes in fruit softening. We identified all 15 MrBGALs and conducted a comprehensive analysis, including phylogenetic relationships, gene structure, protein motifs, co-linearity, and expression patterns. Using phylogenetic analysis, we classified all MrBGALs into five distinct groups. Additionally, cis-element prediction and comparative genome analysis provided insightful clues about the functionality of MrBGALs. Transcriptome data revealed unique expression patterns of MrBGALs throughout various fruit development stages. These findings introduce valuable candidate genes that can contribute to unraveling the functions and molecular mechanisms governing fruit development and softening in Chinese bayberry. Full article
Show Figures

Figure 1

8 pages, 2299 KB  
Brief Report
Identification and Genome Characterization of a Novel Virus within the Genus Totivirus from Chinese Bayberry (Myrica rubra)
by Zhongtian Xu, Yi’nan Gao, Kun Teng, Huoyang Ge, Xiaoqi Zhang, Mengjing Wu, Ruhui Li, Zujian Wu and Luping Zheng
Viruses 2024, 16(2), 283; https://doi.org/10.3390/v16020283 - 12 Feb 2024
Cited by 2 | Viewed by 2413
Abstract
Chinese bayberry (Myrica rubra) is an economically significant fruit tree native to eastern Asia and widely planted in south-central China. However, studies about the viruses infecting M. rubra remain largely lacking. In the present study, we employed the metatranscriptomic method to [...] Read more.
Chinese bayberry (Myrica rubra) is an economically significant fruit tree native to eastern Asia and widely planted in south-central China. However, studies about the viruses infecting M. rubra remain largely lacking. In the present study, we employed the metatranscriptomic method to identify viruses in M. rubra leaves exhibiting yellowing and irregular margin symptoms collected in Fuzhou, a city located in China’s Fujian province in the year 2022. As a consequence, a novel member of the genus Totivirus was identified and tentatively named “Myrica rubra associated totivirus 1” (MRaTV1). The genome sequencing of MRaTV1 was determined by overlapping reverse transcription polymerase chain reaction (RT-PCR) and rapid amplification of cDNA ends (RACE). The two deduced proteins encoded by MRaTV1 have the highest amino acid (aa) sequence identity to the coat protein (CP) and RNA-dependent RNA polymerase (RdRP) of Panax notoginseng virus A (PNVA), a member of the genus Totivirus within the family Totiviridae, at 49.7% and 61.7%, respectively. According to the results of the phylogenetic tree and the species demarcation criteria of the International Committee on Taxonomy of Viruses (ICTV) for the genus Totivirus, MRaTV1 is considered a new member of the genus Totivirus. Full article
(This article belongs to the Special Issue Next-Generation Sequencing in Plant Virology 2.0)
Show Figures

Figure 1

15 pages, 3911 KB  
Article
Non-Destructive Determination of Bayberry Sugar and Acidity by Hyperspectral Remote Sensing of Si-Sensor and Low-Cost Portable Instrument Development
by Jiaoru Wang, Weizhi Wu, Shoupeng Tian, Yadong He, Yun Huang, Fumin Wang and Yao Zhang
Sensors 2023, 23(24), 9822; https://doi.org/10.3390/s23249822 - 14 Dec 2023
Cited by 1 | Viewed by 1978
Abstract
The digitalization of information is crucial for the upgrading of the bayberry digital agriculture industry, while the low-cost information detection sensing equipment for bayberry are a bottleneck for the digital development of the industry. The existing rapid and non-destructive detection devices for fruit [...] Read more.
The digitalization of information is crucial for the upgrading of the bayberry digital agriculture industry, while the low-cost information detection sensing equipment for bayberry are a bottleneck for the digital development of the industry. The existing rapid and non-destructive detection devices for fruit acidity and sugar content mainly use near-infrared and mid-infrared spectral characteristic for detection. These devices use expensive InGaAs sensor, which are difficult to promote and apply in the bayberry digital industry. This study is based on the high-spectral range of 454–998 nm in bayberry fruit to study the mechanism of fruit sugar and acidity content detection and to develop a portable bayberry fruit sugar and acidity detection device using Si-sensor in order to achieve low-cost quality parameter detection of bayberry fruit. The research results show that: Based on the hyperspectral of bayberry fruit, the sensitive wavelength for sugar content inversion is 610 nm, and the inversion accuracy (RMSE) is 1.399Brix; the sensitive wavelength for pH inversion is 570 nm, and the inversion accuracy (RMSE) is 0.1329. Based on the above spectroscopic detection mechanism and spectral dimension reduction methods, combined with low-cost Si-sensor (400–1000 nm), a low-cost non-destructive portable bayberry fruit sugar and acidity detection device has been developed, with detection accuracies of 94.74% and 97.14%, respectively. This bayberry fruit sugar and acidity detector provides a low-cost portable non-destructive quality detection instrument of bayberry, which is in line with the industrial group of low consumption in which the bayberry is mainly cultivated on a small scale, accelerating the digitalization process of the bayberry industry. Full article
(This article belongs to the Special Issue Perception and Imaging for Smart Agriculture)
Show Figures

Figure 1

18 pages, 9401 KB  
Article
YOLO v7-CS: A YOLO v7-Based Model for Lightweight Bayberry Target Detection Count
by Shuo Li, Tao Tao, Yun Zhang, Mingyang Li and Huiyan Qu
Agronomy 2023, 13(12), 2952; https://doi.org/10.3390/agronomy13122952 - 29 Nov 2023
Cited by 30 | Viewed by 3504
Abstract
In order to estimate bayberry yield, a lightweight bayberry target detection count model, YOLOv7-CS, based on YOLOv7, was proposed to address the issues of slow detection and recognition speed, as well as low recognition rate, of high-density bayberry targets under complex backgrounds. In [...] Read more.
In order to estimate bayberry yield, a lightweight bayberry target detection count model, YOLOv7-CS, based on YOLOv7, was proposed to address the issues of slow detection and recognition speed, as well as low recognition rate, of high-density bayberry targets under complex backgrounds. In this study, 8990 bayberry images were used for experiments. The training set, validation set, and test set were randomly recreated in a ratio of 8:1:1. The new network was developed with SPD-Conv detection head modules to extract features at various scales, to better capture small and indistinct bayberry targets. To improve accuracy and achieve a lightweight design, a CNxP module that replaces the backbone’s ELAN structure is proposed. We propose a global attention mechanism (GAM) in the intermediate layers of the network, to enhance cross-dimensional interactions, and a new pyramid pooling module called SPPFCSPC, to extend the field of perception and improve boundary detection accuracy. Finally, we combine the Wise-IoU function to enhance the network’s ability to identify overlapping and occluded objects. Compared with the SSD, Faster-RCNN, DSSD, and YOLOv7X target detection algorithms, YOLOv7-CS increases mAP 0.5 by 35.52%, 56.74%, 12.36%, and 7.05%. Compared with basic YOLOv7, mAP 0.5 increased from 5.43% to 90.21%, while mAP 0.95 increased from 13.2% to 54.67%. This parameter is reduced by 17.3 m. Ablation experiments further show that the designed module improves the accuracy of bayberry detection, reduces parameter counts, and makes bayberry image detection more accurate and effective. Full article
Show Figures

Figure 1

Back to TopTop