Search Results (52)

Background: Fish skin mucus contains proteins involved in diverse biological pathways, representing a valuable non-invasive diagnostic of fish health. Methods: Skin mucus from three male and three female barramundi was analysed using liquid chromatography-tandem mass spectrometry (LC-MS/MS) following protein extraction and S-Trap digestion. Results and Discussion: A total of 1801 protein groups were matched to the L. calcarifer reference proteome and functionally annotated using Gene Ontology (GO) terms via UniProt ID mapping, with representation across Biological Process, Cellular Component, and Molecular Function categories. Functional classification using eggNOG-mapper further associated leading protein group sequences with Clusters of Orthologous Groups (COGs) and Kyoto Encyclopaedia of Genes and Genomes (KEGG) pathways. GO-based screening prioritised 352 putatively immune-relevant protein groups and 24 protein groups associated with sex- and reproduction-related processes, highlighting the functional complexity of the skin mucus proteome. Comparative analysis revealed sex-associated patterns in protein group detection and relative abundance, with differential abundance analysis identifying 244 protein groups exhibiting statistically significant differences between male and female samples. Conclusions: This study provides the first comprehensive discovery-based characterisation of the barramundi skin mucus proteome and establishes a baseline reference dataset for this aquaculture-relevant species. The findings support the utility of skin mucus proteomics for exploring immune and sex-associated molecular patterns and provide a baseline dataset for future validation studies investigating non-invasive health and reproductive monitoring. Full article

To investigate the dynamic characteristics of early fish life stages and their association with environmental factors in Xiangshan Bay, China, two surveys were conducted in the springs of 2023 and 2024 to collect fish eggs and larvae. A total of 21,221 eggs and 10,730 larvae of 23 species belonging to 5 orders and 13 families were collected. Dominant species identified from eggs included Scomberomorus niphonius, Konosirus punctatus, and Pennahia argentata, while dominant species of larvae included Engraulis japonicus, Planiliza haematocheilus, and Rhinogobius giurinus. Species diversity analysis showed that the diversity was higher in spring 2023 (H′ = 1.13) but decreased in spring 2024 due to the outbreak of dominant species (H′ = 0.86). Cluster analysis and non-metric multidimensional scaling ordination analysis revealed significant regional differentiation in the community structure of fish eggs and larvae between the springs of 2023 and 2024. Mantel test correlation and redundancy analyses indicated that temperature, salinity, dissolved oxygen, and chlorophyll-a concentration were the main environmental factors influencing the distribution of fish eggs and larvae. This study elucidates spatio-temporal patterns and environmental response mechanisms of early fish life stages in Xiangshan Bay, providing scientific support for the conservation and sustainable utilization of fishery resources in the National Fishery Germplasm Resource Reserve. Full article

The reproductive behavior and nest-building activity of the sand-dwelling goby Hazeus ammophilus were investigated to examine its nesting characteristics and to determine how and why this species builds radial structures around its nests. Field observations revealed that males spawned with multiple females in open muddy-sand bottoms, using bivalve shells or fallen leaves as spawning substrates. Males cared for eggs after spawning and repeatedly mated with multiple females, suggesting a male-territory-visiting polygamous mating system. A distinctive feature of this species was the presence of radial ditches extending from the nest. These ditches developed through repeated male behaviors of digging from the nest toward the surrounding area and sweeping accumulated sand out of the nest, resulting in a crater-like structure around the nest. These behaviors may contribute to cleaning and stabilizing the spawning substrate, and the resulting structures themselves may also be involved in female mate choice. Taken together, these findings indicate that H. ammophilus has evolved a flexible reproductive strategy, and nest-building behavior possibly adapted to unstable open sandy environments, highlighting the behavioral diversity and ecological plasticity within gobiid fishes. Full article

Yueqing Bay in China supports important marine resources that sustain local fisheries and food security, but increasing anthropogenic pressures and natural environmental changes threaten its biodiversity. This study used morphological identification, COI DNA barcoding, and 12S DNA metabarcoding to assess ichthyoplankton composition and fish spawning patterns. A total of 13,415 eggs and 17,291 larvae were collected using horizontal and vertical plankton nets. Morphological analysis identified 58 taxa, while molecular methods detected 21 species (COI) and 48 species (12S), with an overall total of 105 species from 78 genera and 42 families. Spawning activity showed clear seasonal and spatial patterns, with the highest abundance and diversity in spring and summer, particularly around Ximen Island and the Bay mouth. These areas function as key spawning and nursery grounds. 12S DNA metabarcoding contributed strongly to species detection, especially for cryptic and morphologically indistinguishable larvae, complementing traditional surveys. The findings provide essential baseline information for monitoring fish stocks, protecting critical habitats, and improving fishery management strategies under increasing anthropogenic and climate-related pressures in Yueqing Bay. Full article

Background: Foundational learning spaces in South Africa, designed to nurture growth and development, continue to grapple with malnutrition, a persistent barrier to the health, cognitive potential, and wellbeing of preschool-aged children, amidst a nutrition transition. Aim: This study assessed dietary diversity, nutritional status, and their associations among children aged 2–5 years attending funded Early Learning Centres (ELCs) in Johannesburg (Region C). Methods: Using systematic random sampling across 33 nutrition-funded ELCs in Region C, we assessed the nutritional status of children aged 2–5 years with WHO Anthro software (z-score cut-offs for undernutrition: stunting, underweight, thinness; overnutrition: overweight, obesity). Dietary diversity scores (DDSs) were derived from a 24 h recall of 16 food groups, classified by primary nutrient contributions (some groups spanning multiple classes), and categorized as low (≤8) or normal (≥9). Associations between DDS and nutritional indicators were analyzed using Poisson regression to estimate adjusted prevalence ratios (aPRs). Results: Despite structured feeding practices, all ELCs reported inadequate nutritional funding, prompting calls for dietitian support. While 27% sourced groceries from wholesalers, most relied on supermarkets and spaza shops; all had cooking infrastructure, but only 12% had food gardens, and 88% expressed interest in establishing them to improve dietary diversity. The mean DDS was 9.47 (±1.07), and 83% of children had a normal DDS (≥9), with common consumption of cereals (100%), vitamin A-rich vegetables (100%), oils (100%), and leafy greens (96%), but limited intake of protein-rich foods like eggs (7%), legumes (19%), and fish (37%). A dual burden of malnutrition was observed: 31% of children were stunted and 30% were overweight or obese. Multivariable analysis showed that boys had significantly lower odds of stunting compared to girls (aPR = 0.38; 95%CI: 0.01–0.74), while younger age (aPR = 0.61; 95%CI: 0.37–0.85) and low DDS (aPR = −0.15; 95%CI: −0.29–−0.06) were independently associated with increased risk of stunting. Age was positively associated with underweight (aPR = 1.27; 95%CI: 0.58–1.96), and thinness was strongly associated with boys (aPR = 17.00; 95%CI: 15.12–18.74), with a marginal association with age. Conclusions: Integrated nutrition strategies are critical to addressing the dual burden of stunting and being overweight in urban ELCs. Strengthening funding, professional dietetic support, and promoting food gardens can enhance dietary diversity and child health outcomes. Full article

The Upper Yangtze River National Nature Reserve for Rare and Endemic Fish is a critical sanctuary facing increasing pressure from hydropower development. To assess its current ecological state, we employed environmental DNA (eDNA) metabarcoding on 48 water samples collected from 16 transects in August 2024. Our analysis identified 93 fish species from 3 orders, 13 families, and 67 genera, of which 89 were consistent with historical records. The Cyprinidae family was dominant. The fish community was predominantly characterized by slow-flowing, benthic, omnivorous, and migratory taxa that lay adhesive eggs, with key life-history traits including a sexual maturity age of 1–4 years and a length at first maturity under 20 cm. Spatially, species richness was highest in the Chishui River (64 species), followed by the Minjiang River (61 species). While alpha diversity was largely consistent across most rivers (except the Minjiang), beta diversity analysis revealed significant compositional differences among basins (PERMANOVA, R² = 0.2747, p = 0.001). Notably, the Chishui River supported not only the highest richness but also a distinct community structure. In summary, this study provides a systematic current status assessment of the reserve’s fish resources, revealing significant spatial heterogeneity, Our findings underscore the potential impacts of dam construction and offer a scientific basis for informing effective conservation strategies. Full article

Sustainability of animal production requires reducing reliance on soybean meal by identifying viable alternative protein sources. Within the framework of the Italian Agritech National Research Center, seven Italian research groups collaborated to evaluate unconventional feed ingredients and their effects on animal performance and product quality. Alternative legume seeds (peas, chickpeas, faba bean, and lupins) can partially or completely replace soybean meal without impairing productivity, while enhancing product health value and shelf-life through bioactive compounds. Microalgae (Chlorella, Spirulina) improved carotenoid content, antioxidant activity, fatty acid profile, and cholesterol levels in poultry products, with limited effects in pigs. Insects supported optimal growth in fish at 25–30% inclusion, whereas maximum recommended levels are 15% in broilers and 24% in laying hens to sustain growth, egg production, and quality. Camelina by-products are suitable for poultry diets at up to 5–10%, beyond which performance declines. Whole-plant soybean silage, tef (Eragrostis tef), and triticale–lupin intercropping represent promising protein-rich resources for ruminants, provided diets maintain balanced protein-to-energy ratios, adequate fibre characteristics, and appropriate harvest timing under drought-prone conditions. Collectively, these findings highlight the potential of diverse protein sources to improve the sustainability of livestock systems while preserving productivity and enhancing the nutritional quality of animal-derived foods. Full article

Background and Aim: Underweight young adult women are vulnerable to health risks such as menstrual disorders and vitamin deficiencies. Because few seek medical care for low body weight, the underlying causes remain unclear. This study aimed to examine the associations of body type with dietary patterns and gut microbiota diversity in young women. Methods: We enrolled 40 women aged 20–39 years who visited a nutrition evaluation clinic with a BMI < 17.5 at their first consultation (underweight group) and 40 age-matched women with 18.5 ≤ BMI < 25 (control group). Some women in the underweight group were no longer underweight at the time of analysis but were classified based on their initial BMI. Dietary patterns were assessed based on ten major food categories (meat, fish, eggs, dairy products, soybeans, green and yellow vegetables, seaweed, fruit, tubers, and fats and oil) based on the Food Frequency Questionnaire based on Food Groups. Gut microbiota α-diversity was evaluated using the Shannon, Simpson, and Pielou indices, while β-diversity was analyzed by nonmetric multidimensional scaling (NMDS) and redundancy analysis (RDA). Genera contributing to group differences were identified by RDA and ANOVA-Like Differential Expression tool (ALDEx2). Results: Underweight women had significantly lower gut microbiota α-diversity, while no difference was observed in dietary patterns. NMDS revealed significant β-diversity differences in gut microbiota (PERMANOVA: R² = 0.064, F = 5.31, p = 0.0001) but not in dietary patterns (p = 0.99). RDA showed that body type explained 4.5% of variance (adjusted R² = 0.032, F = 3.65, p = 0.0005). Bacteroides, Bifidobacterium, Enterocloster, and Erysipelatoclostridium were enriched in underweight women, whereas Fusicatenibacter, Agathobacter, Dorea, and Prevotella were enriched in controls. AldEx2 confirmed increases in Bacteroides, Enterocloster, and Erysipelatoclostridium and a decrease in Dorea. Conclusions: Underweight women demonstrated reduced gut microbiota diversity and enrichment of taxa associated with inflammatory tendencies. Dietary therapies involving not only prebiotics but also probiotics may beneficially modulate gut microbiota and contribute to the management of low body weight. Full article

Background: Previous research examining the effects of omnivorous and plant-based diets on cardiovascular disease (CVD) outcomes has produced inconsistent findings, and the importance of diet quality is overlooked. Our study aimed to develop a novel heart-protective diet index to assess the association of a high-quality, predominantly plant-based diet—including fish, eggs, and low-fat dairy products—with CVD incidence and mortality. Methods: This study included 192,274 participants in the UK Biobank (mean age: 56.3 ± 7.9 years) without CVD at baseline who completed a 24 h recall Oxford WebQ questionnaire. Using the Oxford WebQ questionnaire, we developed and validated a novel heart-protective diet score (HPDS) based on 22 food groups. Cox proportional hazard models were used to study the associations between HPDS and outcomes. Results: During a median follow-up of 12.3 years, 20,692 CVD events and 1131 CVD deaths were observed. After adjusting for demographics, Townsend deprivation index, lifestyle, and history of chronic diseases, participants in the top HPDS quartile were at lower risk, compared to those in the bottom quartile, of overall CVD (HR: 0.92 [95%CI: 0.88, 0.95]), IHD (HR: 0.89 [95%CI: 0.84, 0.94]), MI (HR: 0.85 [95%CI: 0.77, 0.94]), and HF (HR: 0.86 [95%CI: 0.77, 0.95]). Conclusions: Adherence to a healthy, predominantly plant-based heart-protective diet rich in non-starchy vegetables, fruits, wholegrains, fish, eggs, and low-fat dairy products is associated with a reduced cardiovascular disease incidence and mortality. Further research in diverse ethnic populations is necessary to examine the reproducibility of our findings and enhance generalizability. Full article

Spawning diversity plays an essential role in fish survival and reproduction, which contributes to the exceptional diversity of teleosts among vertebrates. Different zona radiata structures reflect the adaptability of fish to the environment of spawning and early embryonic development. The morphological and transcriptional characteristics of fish follicle development between different spawning habits, particularly the zona radiata variations, have been poorly documented. In this study, we integrated histology and transcriptomics to investigate the differences in the zona radiata structure and gene expression profiles among follicles from different spawning habits of Culter alburnus. Our results revealed that stage Ⅲ was the crucial period for zona radiata thickening and structure differentiation. Transcriptomic analyses of adhesive and semi-buoyant eggs at stage Ⅲ revealed a significant upregulation of genes involved in glycoprotein synthesis, extracellular matrix formation, and regulation of protease activity in adhesive eggs, such as the wfdc and a2ml gene family. This upregulation likely underpins the thicker zona radiata in adhesive eggs, facilitating their attachment to substrates. This study represents the first elucidation of the ultrastructure of the zona radiata and gene expression patterns in different developmental stages of adhesive and semi-buoyant eggs of Culter alburnus, offering new perspectives for aquaculture research in understanding fish reproductive adaptations. Full article

Background/Objectives: Dietary patterns vary with age and sex. The aim of this study was to clarify the differences in dietary patterns among young and middle-aged Japanese individuals by age group and sex via statistical methods such as alpha diversity and beta diversity analyses. Methods: Using data from a dietary survey of 10 food items during health checkups of 2743 Fujita Health University employees, we examined the effects of age and sex on alpha diversity (Shannon index) and beta diversity (nonmetric multidimensional scaling (NMDS) and RDA). Unlike principal component analysis which assumes linear relationships, redundancy analysis (RDA) incorporates explanatory variables to directly assess how external factors shape multivariate patterns. Results: The Shannon index increased with age and was greater in males across age groups. Type III ANOVA revealed significant main effects of age (p < 0.001) and sex (p < 0.001), and the effect of the interaction between age and sex approached significance (p = 0.08). Visualization of the NMDS data revealed that women aged 20–29 years and women aged 30 years and older and men aged 20–39 years and men aged 50–59 years have different dietary patterns. The RDA model accounted for 2.01% of the variance (adjusted R² = 1.94%), with age and sex contributing 56.7% and 43.3%, respectively. RDA1 and RDA2 were correlated with age (r = 0.26, −0.14) and sex (r = 0.15, 0.21). The RDA1 values increased with age and were greater in females, whereas the RDA2 values decreased with age and were greater in females. RDA1 (1.41% of the total variance in food group intake, 70.1% of the constrained variance) was positively associated with fruits, milk, and seaweed and negatively associated with meat and eggs. In RDA2 (0.60% of total variance, 29.9% contribution), fruits, potatoes, and vegetables had positive effects, whereas fish had negative effects. Conclusions: Dietary patterns vary by age and sex, with meat, fish, eggs, and fruit as key determinants. Nutritional guidance must account for variations in dietary patterns influenced by age and sex. Full article

Parental care increases offspring survival but is typically costly to the parent providing it. Understanding diversity in parental care across animals is a timely topic in evolutionary ecology. Fishes are particularly well suited for studies aimed at understanding the diversity of parental care because parental care in fishes is highly variable across species. In most fish species, no care is provided. When parental care is provided, it is often paternal, although biparental and maternal care occur in some fish species as well. Parental care in fishes ranges from simple guarding of eggs in a territory to prolonged care of young after hatching. Within fishes, gobies are thought to exhibit diverse parental care. In the current manuscript, we begin to synthesize our knowledge of patterns of parental care in gobies by providing a review of the parental care strategies that are exhibited by gobiid species. Our review reveals that parental care in gobies most often includes guarding, fanning, and cleaning, although some species engage in other types of care such as larval release, the production of antimicrobial substances, and the construction of post-mating mounds. Care in gobies is most often paternal, but maternal and biparental care have been documented in some species. Full article

Aquaculture play a vital role in enhancing human nutrition by producing commercially valuable fish, with gilthead seabream (Sparus aurata) being a key species in the Mediterranean region. In seabream larviculture, disinfection is commonly used to control pathogens and prevent microbial imbalances. However, this process may also remove beneficial microbiota that contribute to ecosystem stability. This study aims to investigate the impact of tank disinfection operations on the bacterial communities associated with seabream larvae and their rearing water in a commercial hatchery using 16S rRNA amplicon sequencing. For further comparison, the bacterial communities present in eggs and feed were also analyzed for comparison. Results showed that the use of different disinfectants significantly altered the bacterial composition of the larvae, while the duration of the dry period had no measurable effect. Across all larval samples, the phylum Pseudomonadota dominated, with members of the genus Psychrobacter consistently detected regardless of disinfection treatment. This suggests that Psychrobacter may be transmitted from eggs or acquired through the feed, mainly rotifers and Artemia nauplii. In contrast, the bacterial communities in the rearing water were more diverse and showed only minor differences in relative abundance across disinfection methods. Full article

This study analyses for the first time the genetic diversity, connectivity, and evolutionary dynamics of the small red scorpionfish (Scorpaena notata) in the Balearic Islands, using two mitochondrial DNA markers: Cytochrome c oxidase subunit I (COI) and the Control Region (CR). Nucleotide diversity of the COI gene was found to be low compared to other commercial fish species, suggesting that fishing may be impacting the population despite being a by-catch species. In contrast, the CR showed higher genetic variability. Demographic history analyses suggest that S. notata underwent a population expansion during the Pleistocene, possibly driven by sea-level changes. Genetic structure analyses (F_st and AMOVA) indicated genetic homogeneity and high connectivity among the Balearic Islands’ population, likely facilitated by its passive dispersion via pelagic eggs and larvae and the oceanographic conditions of the region. Our results suggest that the entire Balearic Islands could be considered as a unique Management Unit, although its potential relation to other nearby areas, such as the Iberian Peninsula, along with the analysis of additional genetic markers, should be addressed in future studies. Full article

Background: The complementary food introduction and consumption guidelines for atopic dermatitis and food allergy prevention have evolved; however, their impact on infant feeding practices remains unclear. This study aimed to analyze complementary food diversity trends in infants, identify vulnerable infants with limited food diversity, and examine the trends in infants with or without vulnerable factors over time. Methods: This study analyzed infants aged 9–12 months who participated in the food diversity survey, conducted as part of the National Health Screening Program in Korea from 2009 to 2020. The complementary food items included grains, vegetables, fruits, eggs, fish, and meats. Infants consuming “six” and “less than six” complementary food items were categorized into high- and low-food-diversity groups, respectively. The study employed logistic regression models to examine the trends in food diversity and vulnerable factors with an assessment of the interaction effects. Results: This study included 3,425,301 participants (51.5% male) aged 11.3 months (standard deviation, 0.8). The high-food-diversity prevalence significantly increased over time, from 30.8% in 2009 to 52.9% in 2020 (p < 0.001). Vulnerable infants included those with preterm birth, low birth weight, non-breastfeeding status, high socioeconomic status, non-Seoul residence at birth, any perinatal conditions, hospitalization due to wheezing, atopic dermatitis and food allergies. The high-diversity proportion increased significantly over the study period across all vulnerable factors (p for interaction < 0.001). However, no significant interactions were observed between the study years and vulnerable factors, except for food allergy (β Coefficient, −0.0117, p for interaction = 0.004). Conclusions: The increasing trends in high-complementary-food-diversity proportions highlight the substantial progress over the study period. However, persistent disparities in vulnerable populations underline the importance of targeted interventions, including tailored nutritional education and policies, that promote equitable dietary practices during early life. Full article