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Keywords = chemical equilibrium constant method

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23 pages, 2546 KB  
Article
Impact of Thermodynamic Constraints on the Lability of Activation Energy as a Function of Conversion Degree
by Andrzej Mianowski, Rafał Bigda and Tomasz Radko
Energies 2026, 19(7), 1720; https://doi.org/10.3390/en19071720 - 1 Apr 2026
Viewed by 252
Abstract
The subject concerns the determination of activation energy under dynamic conditions using two theoretical isothermal models, and subsequently experimental data, with reference to the α–T relationship matrix. In recent years, the Vyazovkin method, classified as one of the isoconversional variants, has gained the [...] Read more.
The subject concerns the determination of activation energy under dynamic conditions using two theoretical isothermal models, and subsequently experimental data, with reference to the α–T relationship matrix. In recent years, the Vyazovkin method, classified as one of the isoconversional variants, has gained the greatest recognition. Comparison was made between two isothermal models of the thermal dissociation of calcite, which in chronological terms are associated with a kinetic–nucleation reaction/process (the H-CL, as a kinetic model) and a kinetic–desorption reaction/process (the V, as a thermodynamic model). A comparison of numerical values, understood as the logarithm of the reaction/process rate with respect to temperature, shows correspondence in the temperature range up to the equilibrium temperature. The H-CL model is characterized by a strong dominance of the nucleation process relative to the chemical reaction, whereas the V model exhibits a certain type of balance resulting from the course of the chemical decomposition reaction combined with the transformation of a metastable oxide into a crystalline form. It was confirmed that both models describe the same phenomenon within the transformation process, which implies that for a constant conversion degree, the proportions of the chemical reaction and the physical process vary. Pointwise with increasing temperature, the H-CL model leads to a minimum activation energy E → 0, whereas the V model reaches a negative activation energy E < 0. In both cases, the apparent activation energy summed over the process is constant, and the assigned conversion degree, treated as isoconversional, remains fixed and corresponds to the assumed activation energy of the completed reaction/process. Several simple methods for its determination under dynamic/isoconversion conditions are used. Full article
(This article belongs to the Section J: Thermal Management)
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19 pages, 2773 KB  
Article
Study of the System of Two Parallel Reactions—Carburization of Nanocrystalline Iron and Formation of a Carbon Deposit
by Rafał J. Pelka and Ewa A. Ekiert
Crystals 2025, 15(9), 823; https://doi.org/10.3390/cryst15090823 - 19 Sep 2025
Cited by 1 | Viewed by 807
Abstract
The reaction system of nanocrystalline iron carburization and carbon deposit formation as an example of a parallel chemical reaction was studied. The main measurement procedure was the Chemical Potential Programmed Reaction method, according to which the course of a chemical reaction in this [...] Read more.
The reaction system of nanocrystalline iron carburization and carbon deposit formation as an example of a parallel chemical reaction was studied. The main measurement procedure was the Chemical Potential Programmed Reaction method, according to which the course of a chemical reaction in this particular case was controlled by the methane–hydrogen mixtures of precisely selected variable composition. The measurements were performed in a tubular differential flow reactor with thermogravimetric measurement and analysis of the gas phase composition at a temperature of 650 °C under atmospheric pressure. In the current research, by measuring the mass of the solid sample at changing carburizing potential and after balancing the reacting system, the reaction rates of parallel iron carburization and carbon deposit formation were precisely determined using the model of the reaction of a nanocrystalline substance with the gas phase in states close to chemical equilibrium. The reaction rate constants for those reactions were estimated as well based on model equations. Full article
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34 pages, 7771 KB  
Article
Improving Methanol Production from Carbon Dioxide Through Electrochemical Processes with Draining System
by Cristina Rincón and Carlos Armenta-Déu
Physchem 2025, 5(3), 37; https://doi.org/10.3390/physchem5030037 - 9 Sep 2025
Viewed by 1683
Abstract
The paper describes the conversion of carbon dioxide into methanol in a chemical reactor under standard operating conditions. Electro-analytical techniques, cyclic voltammetry, and chrono-amperometry characterize the process. The electrochemical redox reaction develops using various catalyzers to evaluate the performance of the carbon dioxide [...] Read more.
The paper describes the conversion of carbon dioxide into methanol in a chemical reactor under standard operating conditions. Electro-analytical techniques, cyclic voltammetry, and chrono-amperometry characterize the process. The electrochemical redox reaction develops using various catalyzers to evaluate the performance of the carbon dioxide conversion into methanol process under variable chemical conditions. The results of the applied technique showed an incomplete redox reaction with an electronic change of z = 2.84 on average, below the ideal number, z = 6, that may be due to methanol decomposition (reverse reaction) because the system operates with a reaction constant above the equilibrium value. The methanol production may improve by draining the methanol/water solution from the chemical reactor to reduce the methanol concentration in the electrochemical cell, shifting the forward reaction towards the formation of methanol, increasing the electron change number, which approaches the ideal value, and improving the methanol production efficiency. The draining process shows a significant increase in methanol formation, which depends on the draining flow rate and the catalyzer type. A simulation process shows that if we operate in optimum conditions, with no methanol decomposition through a reverse reaction, the redox reaction fulfills the ideal condition of maximum electronic change. The experimental tests validate the simulation results, showing a relevant increase in the electron change number with values up to z = 4.2 for optimum draining flow rate conditions (0.2 L/s). The experimental results show a relative increase factor of 4.7 in methanol production, meaning we can produce more than four times more methanol compared with no draining techniques. The data analysis shows that the draining flow rate has a threshold of 0.2 L/s, beyond which the extent of the reaction reverses, reducing the methanol formation due to a chemical reaction disequilibrium. The paper concludes that using the draining method, the methanol production mass rate increases significantly from an average value of 20.9 kg/h for non-draining use, considering all catalyzer types, to a range between 91.9 kg/h and 104.3 kg/h, depending on the flow rate. Averaging all values for different flow rates and comparing with the non-draining case, we obtain an absolute methanol production mass rate of 77 kg/h, meaning an incremental percentage of 469.1%, more than four times the initial production. Although the proposed methodology looks promising, applying this procedure on an industrial scale may suffer from restrictions since the chemical reactions intervening in the methanol formation do not perform linearly. According to experimental tests, the best option among the six catalyzers used for methanol production is the plain copper, with copper oxides (Cu2O, CuO) and copper Sulphur (CuS) as feasible alternatives. Full article
(This article belongs to the Section Electrochemistry)
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31 pages, 14838 KB  
Article
The Chemical Stability Characterization and Kinetics of Statins in Aqueous Cyclodextrin Ocular Preparations: A Formulation Perspective
by Ismael Abo Horan, Thorsteinn Loftsson and Hakon Hrafn Sigurdsson
Pharmaceutics 2025, 17(7), 808; https://doi.org/10.3390/pharmaceutics17070808 - 23 Jun 2025
Viewed by 2190
Abstract
Background: Topical statin therapy holds promise for ocular diseases, such as age-related macular degeneration, but the effective delivery to the posterior segment is limited by poor aqueous solubility, chemical instability, and ocular barriers. Cyclodextrins (CDs) can enhance statin solubility and stability; however, [...] Read more.
Background: Topical statin therapy holds promise for ocular diseases, such as age-related macular degeneration, but the effective delivery to the posterior segment is limited by poor aqueous solubility, chemical instability, and ocular barriers. Cyclodextrins (CDs) can enhance statin solubility and stability; however, the behavior of CD–statin complexes in aqueous eye drops—particularly their influence on the equilibrium between the inactive lactone (ring closed) and active hydroxyacid forms (ring open)—remains unclear. This study aimed to (i) investigate how 5% and 10% (w/v) concentrations of selected CDs affect the lactone/acid equilibrium of simvastatin and atorvastatin and (ii) define formulation parameters (statin form, CD type and concentration, and pH range) for stable eye drop development. Methods: Simvastatin or atorvastatin was added to buffered solutions (pH 2.0 to pH 9.5) of RMβCD, HPβCD, γ-CD, or SBEβCD at 0%, 5%, and 10% (w/v), incubated at 23 ± 1 °C, and sampled over time for UPLC quantification of lactone and hydroxyacid forms, and rate constants for the forward and reverse reaction were calculated. Phase solubility studies were also conducted to further characterize equilibrium behavior in aqueous CD systems. Results: The lactone form was most stable at a pH of 4.5, while the hydroxyacid form prevailed at a pH ≥ 7. γ-CD and HPβCD accelerated lactone hydrolysis for both statins, whereas RMβCD exerted a stabilizing effect. Increasing the CD concentration from 5% to 10% provided minimal additional stabilization. Conclusions: These findings highlight that the precise control of the pH, an appropriate cyclodextrin choice, and the selection of the statin form are critical to developing chemically stable eye drops. Full article
(This article belongs to the Special Issue Drug Delivery Systems for Ocular Diseases)
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16 pages, 2885 KB  
Article
Research on the Thermodynamic Simulation Model of Antimony–Lead Synergistic Side-Blown Oxidation Smelting Process Based on MetCal
by Zhenquan Zhong, Mingzhou Li, Yuchen Feng, Baozhong Ma, Xinzhou Chen and Zhongtang Zhang
Processes 2025, 13(4), 1244; https://doi.org/10.3390/pr13041244 - 19 Apr 2025
Viewed by 1256
Abstract
On the basis of the theory of polyphase equilibrium and the utilization of the MetCal software platform (MetCal v7.81), we adopted the chemical equilibrium constant method and successfully constructed a multiphase equilibrium model and simulation system for the antimony–lead synergistic side-blown oxidation smelting [...] Read more.
On the basis of the theory of polyphase equilibrium and the utilization of the MetCal software platform (MetCal v7.81), we adopted the chemical equilibrium constant method and successfully constructed a multiphase equilibrium model and simulation system for the antimony–lead synergistic side-blown oxidation smelting process. In typical production conditions, which encompass factors such as the composition of raw material, the ratio of oxygen to material, and oxygen-enriched concentration, the equilibrium product composition and pivotal technical indices are modeled and computed. Calculation results indicated that, other than the trace elements in the smelting slag, the relative errors of the calculated values for the content of major elements in the antimony-rich crude lead and smelting slag were less than 10% of the measured value after average treatment in production. Therefore, our results showed that the developed model and system preferably embodied the practical production condition of the antimony–lead synergistic side-blown oxidation smelting process, which is capable of precisely forecasting the smelting outcomes and optimizing the process parameters, thereby offering effective guidance for the practical execution of the antimony–lead synergistic side-blown oxidation smelting process. Full article
(This article belongs to the Section Chemical Processes and Systems)
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24 pages, 2985 KB  
Article
Algorithms for Solving the Equilibrium Composition Model of Arc Plasma
by Zhongyuan Chi, Yuzhang Ji, Ningning Liu, Tianchi Jiang, Xin Liu and Weijun Zhang
Entropy 2025, 27(1), 24; https://doi.org/10.3390/e27010024 - 31 Dec 2024
Viewed by 1336
Abstract
In the present study, the Homotopy Levenberg−Marquardt Algorithm (HLMA) and the Parameter Variation Levenberg–Marquardt Algorithm (PV–LMA), both developed in the context of high-temperature composition, are proposed to address the equilibrium composition model of plasma under the condition of local thermodynamic and chemical equilibrium. [...] Read more.
In the present study, the Homotopy Levenberg−Marquardt Algorithm (HLMA) and the Parameter Variation Levenberg–Marquardt Algorithm (PV–LMA), both developed in the context of high-temperature composition, are proposed to address the equilibrium composition model of plasma under the condition of local thermodynamic and chemical equilibrium. This model is essentially a nonlinear system of weakly singular Jacobian matrices. The model was formulated on the basis of the Saha and Guldberg–Waage equations, integrated with Dalton’s law of partial pressures, stoichiometric equilibrium, and the law of conservation of charge, resulting in a nonlinear system of equations with a weakly singular Jacobian matrix. This weak singularity primarily arises due to significant discrepancies in the coefficients between the Saha equation and the Guldberg–Waage equation, attributed to differing chemical reaction energies. By contrast, the coefficients in the equations derived from the other three principles within the equilibrium composition model are predominantly single−digit constants, further contributing to the system’s weak singularity. The key to finding the numerical solution to nonlinear equations is to set reasonable initial values for the iterative solution process. Subsequently, the principle and process of the HLMA and PV–LMA algorithms are analyzed, alongside an analysis of the unique characteristics of plasma equilibrium composition at high temperatures. Finally, a solving method for an arc plasma equilibrium composition model based on high temperature composition is obtained. The results show that both HLMA and PV–LMA can solve the plasma equilibrium composition model. The fundamental principle underlying the homotopy calculation of the (n1) −th iteration, which provides a reliable initial value for the n−th LM iteration, is particularly well suited for the solution of nonlinear equations. A comparison of the computational efficiency of HLMA and PV–LMA reveals that the latter exhibits superior performance. Both HLMA and PV–LMA demonstrate high computational accuracy, as evidenced by the fact that the variance of the system of equations ||F|| < 1 × 10−15. This finding serves to substantiate the accuracy and feasibility of the method proposed in this paper. Full article
(This article belongs to the Section Statistical Physics)
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18 pages, 3621 KB  
Article
Influence of Transfer Epidemiological Processes on the Formation of Endemic Equilibria in the Extended SEIS Model
by Alexander R. Karimov, Michael A. Solomatin and Alexey N. Bocharov
Mathematics 2024, 12(22), 3585; https://doi.org/10.3390/math12223585 - 15 Nov 2024
Cited by 1 | Viewed by 1055
Abstract
In the present paper, a modification of the standard mean-field model is considered, allowing for the description of the formation of a dynamic equilibrium between infected and recovered persons in a population of constant size. The key point of this model is that [...] Read more.
In the present paper, a modification of the standard mean-field model is considered, allowing for the description of the formation of a dynamic equilibrium between infected and recovered persons in a population of constant size. The key point of this model is that it highlights two-infection transfer mechanisms depending on the physical nature of the contact between people. We separate the transfer mechanism related directly to the movement of people (the so-called transport processes) from the one occurring at zero relative speed of persons (the so-called social contacts). Under the framework of a physical chemical analogy, the dependencies for the infection transfer rate constants are proposed for both purely transport and social mechanisms of spread. These dependencies are used in discussing the formation of quasi-stationary states in the model, which can be interpreted as endemic equilibrium states. The stability of such endemic equilibria is studied by the method of Lyapunov function. Full article
(This article belongs to the Special Issue Mathematical Methods and Models in Epidemiology)
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16 pages, 1401 KB  
Article
Quelling the Geometry Factor Effect in Quantum Chemical Calculations of 13C NMR Chemical Shifts with the Aid of the pecG-n (n = 1, 2) Basis Sets
by Yuriy Yu. Rusakov, Valentin A. Semenov and Irina L. Rusakova
Int. J. Mol. Sci. 2024, 25(19), 10588; https://doi.org/10.3390/ijms251910588 - 1 Oct 2024
Cited by 5 | Viewed by 2057
Abstract
A root factor for the accuracy of all quantum chemical calculations of nuclear magnetic resonance (NMR) chemical shifts is the quality of the molecular equilibrium geometry used. In turn, this quality depends largely on the basis set employed at the geometry optimization stage. [...] Read more.
A root factor for the accuracy of all quantum chemical calculations of nuclear magnetic resonance (NMR) chemical shifts is the quality of the molecular equilibrium geometry used. In turn, this quality depends largely on the basis set employed at the geometry optimization stage. This parameter represents the main subject of the present study, which is a continuation of our recent work, where new pecG-n (n = 1, 2) basis sets for the geometry optimization were introduced. A goal of this study was to compare the performance of our geometry-oriented pecG-n (n = 1, 2) basis sets against the other basis sets in massive calculations of 13C NMR shielding constants/chemical shifts in terms of their efficacy in reducing geometry factor errors. The testing was carried out with both large-sized biologically active natural products and medium-sized compounds with complicated electronic structures. The former were treated using the computation protocol based on the density functional theory (DFT) and considered in the theoretical benchmarking, while the latter were treated using the computational scheme based on the upper-hierarchy coupled cluster (CC) methods and were used in the practical benchmarking involving the comparison with experimental NMR data. Both the theoretical and practical analyses showed that the pecG-1 and pecG-2 basis sets resulted in substantially reduced geometry factor errors in the calculated 13C NMR chemical shifts/shielding constants compared to their commensurate analogs, with the pecG-2 basis set being the best of all the considered basis sets. Full article
(This article belongs to the Section Physical Chemistry and Chemical Physics)
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16 pages, 1917 KB  
Article
Thermodynamic Simulation Model of Copper Side-Blown Smelting Process
by Mingzhou Li, Yuchen Feng and Xinzhou Chen
Metals 2024, 14(8), 840; https://doi.org/10.3390/met14080840 - 23 Jul 2024
Cited by 7 | Viewed by 3636
Abstract
In this study, the thermodynamic simulation model and system of the copper side-blown smelting process were established using the chemical equilibrium constant method, based on the process reaction mechanism, multiphase equilibrium principle, and MetCal software platform (MetCal v7.81). Under typical production conditions, the [...] Read more.
In this study, the thermodynamic simulation model and system of the copper side-blown smelting process were established using the chemical equilibrium constant method, based on the process reaction mechanism, multiphase equilibrium principle, and MetCal software platform (MetCal v7.81). Under typical production conditions, the composition of the product and the distribution behavior of impurity elements were simulated. The results indicate that the average relative error between the calculated mass fractions of major elements such as Cu, S, Fe, SiO2, CaO, MgO, and Al2O3 in copper matte and smelting slag, and the actual production values, is 4.25%. Additionally, the average relative error between the calculated distribution ratios of impurity elements such as Pb, Zn, As, Bi, Mo, Au, and Ag in copper matte and smelting slag, and the actual production data, is 6.74%. Therefore, this model and calculation system accurately reflects the actual production situation of the copper side-blown smelting process well and has potential to predict process output accurately while optimizing process parameters, effectively guiding production practice. Full article
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19 pages, 6384 KB  
Article
Influence of Mechanical Loading on the Process of Tribochemical Action on Physicochemical and Biopharmaceutical Properties of Substances, Using Lacosamide as an Example: From Micronisation to Mechanical Activation
by Elena V. Uspenskaya, Ekaterina Kuzmina, Hoang Thi Ngoc Quynh, Maria A. Komkova, Ilaha V. Kazimova and Aleksey A. Timofeev
Pharmaceutics 2024, 16(6), 798; https://doi.org/10.3390/pharmaceutics16060798 - 13 Jun 2024
Cited by 1 | Viewed by 1827
Abstract
Many physical and chemical properties of solids, such as strength, plasticity, dispersibility, solubility and dissolution are determined by defects in the crystal structure. The aim of this work is to study in situ dynamic, dispersion, chemical, biological and surface properties of lacosamide powder [...] Read more.
Many physical and chemical properties of solids, such as strength, plasticity, dispersibility, solubility and dissolution are determined by defects in the crystal structure. The aim of this work is to study in situ dynamic, dispersion, chemical, biological and surface properties of lacosamide powder after a complete cycle of mechanical loading by laser scattering, electron microscopy, FR-IR and biopharmaceutical approaches. The SLS method demonstrated the spontaneous tendency toward surface-energy reduction due to aggregation during micronisation. DLS analysis showed conformational changes of colloidal particles as supramolecular complexes depending on the loading time on the solid. SEM analysis demonstrated the conglomeration of needle-like lacosamide particles after 60 min of milling time and the transition to a glassy state with isotropy of properties by the end of the tribochemistry cycle. The following dynamic properties of lacosamide were established: elastic and plastic deformation boundaries, region of inhomogeneous deformation and fracture point. The ratio of dissolution-rate constants in water of samples before and after a full cycle of loading was 2.4. The lacosamide sample, which underwent a full cycle of mechanical loading, showed improved kinetics of API release via analysis of dissolution profiles in 0.1 M HCl medium. The observed activation-energy values of the cell-death biosensor process in aqueous solutions of the lacosamide samples before and after the complete tribochemical cycle were 207 kJmol−1 and 145 kJmol−1, respectively. The equilibrium time of dissolution and activation of cell-biosensor death corresponding to 20 min of mechanical loading on a solid was determined. The current study may have important practical significance for the transformation and management of the properties of drug substances in solid form and in solutions and for increasing the strength of drug matrices by pre-strain hardening via structural rearrangements during mechanical loading. Full article
(This article belongs to the Special Issue Novel Dry Powder Formulation and Delivery Systems)
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17 pages, 4527 KB  
Article
Investigating the Corrosion Inhibition Mechanisms of Alkanolammonium Salts: A Case Study with Ethylethanolammonium 4-Nitrobenzoate on Carbon Steel in Saline Solution
by Manuela Crisan, Cornelia Muntean, Yurii Chumakov and Nicoleta Plesu
Appl. Sci. 2024, 14(5), 1832; https://doi.org/10.3390/app14051832 - 23 Feb 2024
Cited by 7 | Viewed by 2194
Abstract
This study explores the potential corrosion inhibition mechanisms of alkanolammonium salts, exemplified by ethylethanolammonium 4-nitrobenzoate (EEA4NB), for carbon steel, utilizing experimental and theoretical methods. The interactions between metal and inhibitor, focusing on adsorption behavior in saline solutions, will be thoroughly investigated. Analysis of [...] Read more.
This study explores the potential corrosion inhibition mechanisms of alkanolammonium salts, exemplified by ethylethanolammonium 4-nitrobenzoate (EEA4NB), for carbon steel, utilizing experimental and theoretical methods. The interactions between metal and inhibitor, focusing on adsorption behavior in saline solutions, will be thoroughly investigated. Analysis of potentiodynamic polarization curves and electrochemical impedance spectroscopy reveals that the inhibition efficiency (IE) increases with the rising concentration of EEA4NB, reaching 96% at 5 × 10−3 M. Negative adsorption free energy and a high adsorption equilibrium constant suggest the spontaneous formation of a protective inhibitor layer on the metal surface, effectively blocking reaction sites and reducing the corrosion rate, according to the Langmuir isotherms model. As confirmed by scanning electron microscopy, physical and chemical interactions contribute to the adsorption mechanisms. Quantum chemical calculations explore the relationship between EEA4NB molecular configuration and inhibition efficiencies. The study emphasizes the potential efficacy of alkanolammonium salts, exemplified by EEA4NB, as effective corrosion inhibitors for carbon steel in aggressive environments. Full article
(This article belongs to the Special Issue New Trends in Functional and Multifunctional Advanced Materials)
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57 pages, 10028 KB  
Review
The Miracle of Vitamin B12 Biochemistry
by Tudor Spataru
Reactions 2024, 5(1), 20-76; https://doi.org/10.3390/reactions5010002 - 5 Jan 2024
Cited by 9 | Viewed by 11002
Abstract
For decades, the comparison of experimental data with theoretical results in studying the biochemistry of vitamin B12 has been very confusing. While the methylcobalamin cofactor-dependent Methionine Synthase process can undergo unlimited turnovers, and some of the adenosylcobalamin-dependent processes run with close-to-unity equilibrium constants [...] Read more.
For decades, the comparison of experimental data with theoretical results in studying the biochemistry of vitamin B12 has been very confusing. While the methylcobalamin cofactor-dependent Methionine Synthase process can undergo unlimited turnovers, and some of the adenosylcobalamin-dependent processes run with close-to-unity equilibrium constants (e.g., with close-to-zero energy barriers), the DFT and QM/MM based on density functional theory, the most used and appreciated methods for calculating the electronic structure of molecules, have been showing a much shorter than experimental-determined Co-N distances in the vitamin B12 cofactors of Co+2 and the inadequate large energetic barriers of their enzymology bioprocesses. The confusion was even larger since some in vitro experimental data showed large barriers to the vitamin B12 cofactor reactions (which in fact play a destructive role in the Methionine Synthase process and which barriers were caused mostly by the influence of the solvents in which the reaction took place). It reached the point where solid contributions to the study of the biochemical processes of vitamin B12 were almost officially questioning the correctness of the experimental determination of the Co-N chemical bond distances in the cobalt(II) cofactors of vitamin B12. Unexpectedly, all the theoretical biochemistry of the vitamin B12 cofactors began to agree with all in vivo experimental data only when they were treated with the MCSCF method, the method that considers the orbital mixing, or in other words, the Pseudo-Jahn–Teller Effect. MCSCF data establish unknown mechanistic details of the methyl radical and hydrogen transfers, the origin of the electronic transfers between bioreagents, and the nature and the relationship between the bioreactions. The Pseudo-Jahn–Teller Effect, e.g., orbital mixing, governs vitamin B12 chemistry in general and provides insight into particular details of vitamin B12-dependent reactions in the human body. It turns out that the DFT or QM/MM based on DFT method theoretical data are incongruent with the experimental data due to their limitations, e.g., the unaccounted-for effects of orbital mixing. Full article
(This article belongs to the Special Issue Feature Papers in Reactions in 2023)
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24 pages, 8708 KB  
Article
Compact Combustion Mechanisms of Typical n-Alkanes Developed by the Minimized Reaction Network Method
by Jiangtao Shentu, Yanrong Lu, Yiwei Li, Juanqin Li, Yebing Mao and Xiangyuan Li
Molecules 2023, 28(23), 7695; https://doi.org/10.3390/molecules28237695 - 21 Nov 2023
Cited by 5 | Viewed by 4050
Abstract
The existing combustion kinetic modeling method which aims at developing phenomenological combustion mechanisms characterized by multiple reactions confronts several challenges, including the conflicts between computing resources and mechanism scales during numerical simulation, etc. In order to address these issues, the minimized reaction network [...] Read more.
The existing combustion kinetic modeling method which aims at developing phenomenological combustion mechanisms characterized by multiple reactions confronts several challenges, including the conflicts between computing resources and mechanism scales during numerical simulation, etc. In order to address these issues, the minimized reaction network method for complex combustion system modeling based on the principle of simultaneous chemical equilibrium is proposed, which is aimed to develop combustion mechanisms with minimal reaction steps under a limited number of species. The concept of mechanism resolution is proposed in this method, and the reaction network with minimal reaction steps under a given mechanism resolution is constructed so that the scale of mechanisms is compressed greatly. Meanwhile, distinguishing from other mechanisms, the reversible form of elementary reactions is adopted and the classical two-parameter (A, Ea) Arrhenius equation fits the rate constants. Typical n-alkanes including n-butane, n-heptane, n-octane, n-decane, n-dodecane and n-hexadecane were taken as examples to indicate the development process of mechanisms and systematic kinetic validations were carried out. Results show that this method leads to very compact mechanisms with satisfactory accuracy, and it eliminates the process of mechanism reduction and is beneficial for mechanism optimization. This method and the derived kinetic mechanisms are hoped to contribute to combustion engineering applications. Full article
(This article belongs to the Special Issue Exclusive Feature Papers in Physical Chemistry, 2nd Edition)
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16 pages, 3484 KB  
Article
Mesoporous Layered Double Hydroxides: Synthesis for High Effective Uranium Ions Sorption from Seawater and Salt Solutions on Nanocomposite Functional Materials
by Valeria A. Balybina, Artur N. Dran’kov, Oleg O. Shichalin, Natalia Yu. Savel’eva, Nadezhda G. Kokorina, Zhanna C. Kuular, Nikita P. Ivanov, Svetlana G. Krasitskaya, Andrei I. Ivanets and Evgeniy K. Papynov
J. Compos. Sci. 2023, 7(11), 458; https://doi.org/10.3390/jcs7110458 - 3 Nov 2023
Cited by 15 | Viewed by 2804
Abstract
A series of sorption materials based on layered double hydroxides (Co-Fe LDH, Ni-Fe LDH, and Zn-Ti LDH) were obtained by a facile and environmentally friendly method of coprecipitation. A low particle size of no more than 10 µm was achieved. The use of [...] Read more.
A series of sorption materials based on layered double hydroxides (Co-Fe LDH, Ni-Fe LDH, and Zn-Ti LDH) were obtained by a facile and environmentally friendly method of coprecipitation. A low particle size of no more than 10 µm was achieved. The use of transition metals makes it possible to obtain compounds that are mechanically and chemically stable in aggressive environments. XRD analysis revealed that the compounds have a highly organized crystalline structure. Using SEM, it was determined that Co-Fe LDH and Ni-Fe LDH had a loose, highly dispersed surface structure, while Zn-Ti LDH had a monolithic surface structure. U(VI) adsorption on the obtained materials in solutions containing Na2CO3, Na2SO4, KNO3, NaCl, K3PO4, and NaHCO3, was studied in batch mode. The degree of purification in the presence of these salts reached 99.9%, while the distribution coefficient Kd reached 105 mL/g. Sorption capacity qmax and equilibrium adsorption constants Kf and KL for U(VI) adsorption in batch mode (for 24 h) from distilled and seawater were determined using the Freundlich and Langmuir equations. The highest sorption capacity of 101.6 mg/g in seawater and 114.1 mg/g in distilled water was registered for Co-Fe-LDH. The presence of competing ions in seawater can reduce sorption efficiency by up to 40%. The provided research allowed us to conclude that the obtained materials, Co-Fe LDH, Ni-Fe LDH, and Zn-Ti LDH are promising for the sorption removal of U(VI) from aqueous media of medium salinity. Full article
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19 pages, 4007 KB  
Review
Structural Fluctuation, Relaxation, and Folding of Protein: An Approach Based on the Combined Generalized Langevin and RISM/3D-RISM Theories
by Fumio Hirata
Molecules 2023, 28(21), 7351; https://doi.org/10.3390/molecules28217351 - 30 Oct 2023
Cited by 1 | Viewed by 1945
Abstract
In 2012, Kim and Hirata derived two generalized Langevin equations (GLEs) for a biomolecule in water, one for the structural fluctuation of the biomolecule and the other for the density fluctuation of water, by projecting all the mechanical variables in phase space onto [...] Read more.
In 2012, Kim and Hirata derived two generalized Langevin equations (GLEs) for a biomolecule in water, one for the structural fluctuation of the biomolecule and the other for the density fluctuation of water, by projecting all the mechanical variables in phase space onto the two dynamic variables: the structural fluctuation defined by the displacement of atoms from their equilibrium positions, and the solvent density fluctuation. The equation has an expression similar to the classical Langevin equation (CLE) for a harmonic oscillator, possessing terms corresponding to the restoring force proportional to the structural fluctuation, as well as the frictional and random forces. However, there is a distinct difference between the two expressions that touches on the essential physics of the structural fluctuation, that is, the force constant, or Hessian, in the restoring force. In the CLE, this is given by the second derivative of the potential energy among atoms in a protein. So, the quadratic nature or the harmonicity is only valid at the minimum of the potential surface. On the contrary, the linearity of the restoring force in the GLE originates from the projection of the water’s degrees of freedom onto the protein’s degrees of freedom. Taking this into consideration, Kim and Hirata proposed an ansatz for the Hessian matrix. The ansatz is used to equate the Hessian matrix with the second derivative of the free-energy surface or the potential of the mean force of a protein in water, defined by the sum of the potential energy among atoms in a protein and the solvation free energy. Since the free energy can be calculated from the molecular mechanics and the RISM/3D-RISM theory, one can perform an analysis similar to the normal mode analysis (NMA) just by diagonalizing the Hessian matrix of the free energy. This method is referred to as the Generalized Langevin Mode Analysis (GLMA). This theory may be realized to explore a variety of biophysical processes, including protein folding, spectroscopy, and chemical reactions. The present article is devoted to reviewing the development of this theory, and to providing perspective in exploring life phenomena. Full article
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