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Keywords = hydrogen-bromine

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38 pages, 10941 KB  
Review
Recent Advances in Numerical Modeling of Aqueous Redox Flow Batteries
by Yongfu Liu and Yi He
Energies 2025, 18(15), 4170; https://doi.org/10.3390/en18154170 - 6 Aug 2025
Cited by 1 | Viewed by 1239
Abstract
Aqueous redox flow batteries (ARFBs) have attracted significant attention in the field of electrochemical energy storage due to their high intrinsic safety, low cost, and flexible system configuration. However, the advancement of this technology is still hindered by several critical challenges, including capacity [...] Read more.
Aqueous redox flow batteries (ARFBs) have attracted significant attention in the field of electrochemical energy storage due to their high intrinsic safety, low cost, and flexible system configuration. However, the advancement of this technology is still hindered by several critical challenges, including capacity decay, structural optimization, and the design and application of key materials as well as their performance within battery systems. Addressing these issues requires systematic theoretical foundations and scientific guidance. Numerical modeling has emerged as a powerful tool for investigating the complex physical and electrochemical processes within flow batteries across multiple spatial and temporal scales. It also enables predictive performance analysis and cost-effective optimization at both the component and system levels, thus accelerating research and development. This review provides a comprehensive overview of recent progress in the modeling of ARFBs. Taking the all-vanadium redox flow battery as a representative example, we summarize the key multiphysics phenomena involved and introduce corresponding multi-scale modeling strategies. Furthermore, specific modeling considerations are discussed for phase-change ARFBs, such as zinc-based ones involving solid–liquid phase transition, and hydrogen–bromine systems characterized by gas–liquid two-phase flow, highlighting their distinctive features compared to vanadium systems. Finally, this paper explores the major challenges and potential opportunities in the modeling of representative ARFB systems, aiming to provide theoretical guidance and technical support for the continued development and practical application of ARFB technology. Full article
(This article belongs to the Special Issue Advanced Energy Storage Technologies)
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18 pages, 5810 KB  
Article
Electrochemical Reduction Performance and Mechanism of 2,2′,4,4′-Tetrabromodiphenyl Ether (BDE-47) with Pd/Metal Foam Electrodes
by Chenghao Liang, He Liu, Jiahao Liang, Xiaodong Du, Xueqin Tao and Guining Lu
Processes 2025, 13(3), 853; https://doi.org/10.3390/pr13030853 - 14 Mar 2025
Viewed by 802
Abstract
Polybrominated diphenyl ethers (PBDEs), a type of brominated flame retardant, are of global concern due to their environmental persistence, bioaccumulation, toxicity, and resistance to conventional remediation methods. In this study, the electrochemical reduction of 2,2′,4,4′-tetrabromodiphenyl ether (BDE-47) with Pd/Metal foam electrodes (Ni, Cu, [...] Read more.
Polybrominated diphenyl ethers (PBDEs), a type of brominated flame retardant, are of global concern due to their environmental persistence, bioaccumulation, toxicity, and resistance to conventional remediation methods. In this study, the electrochemical reduction of 2,2′,4,4′-tetrabromodiphenyl ether (BDE-47) with Pd/Metal foam electrodes (Ni, Cu, and Ag) was investigated. The effect of Pd loadings was explored, and the results show that Pd loading enhances the debromination performance, with 15.16%Pd/Ni foam exhibiting the best efficiency, followed by 9.37%Pd/Cu and 10.26%Pd/Ag. The degradation mechanisms for Pd/Ni and Pd/Ag are primarily hydrogen atom transfer, while for Pd/Cu, electron transfer dominates. Among the reduction products, Pd/Ni foam shows the highest debromination capability. The impact of electrolytes, current intensity, and bromination degrees of PBDEs was evaluated for 15.16%Pd/Ni. The results reveal that the presence of electrolytes inhibits BDE-47 degradation; the degradation rate of BDE-47 increases with current density, peaks at 4 mA, and decreases as current rises; and 15.16%Pd/Ni foam can effectively degrade PBDEs with varying bromination levels. Additionally, cycling tests show a decrease in efficiency from 94.3% (first cycle) to 56.58% (fourth cycle), attributed to Pd loss and structural damage. The findings offer valuable insights for developing efficient, sustainable catalytic materials for the electrochemical degradation of PBDEs and other persistent organic pollutants. Full article
(This article belongs to the Special Issue Advances in Remediation of Contaminated Sites: 2nd Edition)
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14 pages, 2902 KB  
Article
Automated GC-FID Analysis of Brominated Flame Retardants in Polyester Resins with Hydrogen Carrier Gas
by Nicola Mucci, Lorenzo Venturini, Niccolò Fanfani, Giovanni Cappelli, Ilaria Rapi, Donato Squillaci, Jacopo Ceccarelli, Antonio Baldassarre, Veronica Traversini and Stefano Dugheri
Fire 2025, 8(2), 82; https://doi.org/10.3390/fire8020082 - 19 Feb 2025
Viewed by 1395
Abstract
Brominated flame retardants (BFRs), including tetrabromobisphenol A (TBBPA) and dibromoneopentyl glycol (DBNPG), are present in both saturated and unsaturated polyester resins (UPRs). Given their toxicity, it is imperative to assess the content of this group of chemicals to ensure product safety and environmental [...] Read more.
Brominated flame retardants (BFRs), including tetrabromobisphenol A (TBBPA) and dibromoneopentyl glycol (DBNPG), are present in both saturated and unsaturated polyester resins (UPRs). Given their toxicity, it is imperative to assess the content of this group of chemicals to ensure product safety and environmental sustainability, considering the paucity in the literature of analytical methods to evaluate them, particularly in solid matrices as UPRs. This study aimed to develop a fully automated gas chromatographic analysis of these BFRs, utilizing a flame ionization detector (FID), with prior derivatization of TBBPA and DBNPG with acetic anhydride. A chemometric evaluation was conducted for the derivatization step to enhance the yield of the procedure. The optimized method met the desired requirements for specificity, accuracy, and sensitivity, showing limits of detection (LOD) and quantitation (LOQ), respectively, of 1.1 µg/mL and 3.3 µg/mL for DBNPG and 3.6 µg/mL and 10.8 µg/mL for TBBPA. Other conventional detectors, i.e., an Electron Capture Detector (ECD) and a Mass Spectrometer (MS), were tested. The ECD showed a higher sensitivity than the FID and MS; however, its linearity proved to be more limited, making it unsuitable for higher concentration scenarios. The MS detector yielded results comparable with those of the FID, yet the latter is a cheaper and more sensitive alternative. Full article
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17 pages, 3655 KB  
Article
Crystal Structures of d-Lyxono-1,4-lactone and Its O-Tosyl Derivative
by Anna Sosnowska, Jarosław Chojnacki, Justyna Samaszko-Fiertek, Janusz Madaj and Barbara Dmochowska
Molecules 2025, 30(2), 287; https://doi.org/10.3390/molecules30020287 - 13 Jan 2025
Viewed by 1694
Abstract
γ- and δ-lactones were formed by bromine oxidation of commercially available D-lyxose, as confirmed by IR analysis. The former was isolated, and its structure was confirmed by NMR spectra and X-ray analysis. In this structure, the presence of both intermolecular and intramolecular hydrogen [...] Read more.
γ- and δ-lactones were formed by bromine oxidation of commercially available D-lyxose, as confirmed by IR analysis. The former was isolated, and its structure was confirmed by NMR spectra and X-ray analysis. In this structure, the presence of both intermolecular and intramolecular hydrogen bonds was found. Intermolecular interactions in the crystal were illustrated using the Hirshfeld surfaces. Due to steric reasons, 3,5-O-isopropylidene-d-lyxono-1,4-lactone was formed, which in a further step led to the formation of a 2-O-tosyl derivative. Its structure was confirmed by X-ray diffraction analysis. The additional ring of the O-isopropylidene derivative caused the lactone ring to change conformation to 3E. In the crystal structure of this compound, only C-H⸱⸱⸱O intermolecular interactions were present, as confirmed by the Hirshfeld surface analysis. Full article
(This article belongs to the Special Issue Reviews of Chemical Crystallography)
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17 pages, 48563 KB  
Article
Molecular Dynamic Simulation of the Interaction of a Deep Eutectic Solvent Based on Tetraethylammonium Bromide with La3+ in Acidic Media
by Luver Echeverry-Vargas, Luz M. Ocampo-Carmona and Leopoldo Gutiérrez
Minerals 2024, 14(7), 711; https://doi.org/10.3390/min14070711 - 13 Jul 2024
Cited by 2 | Viewed by 1885
Abstract
In recent years, noticeable progress has been made in the development of alternative extraction systems characterized by greater sustainability. In this context, deep eutectic solvents (DESs) have emerged as a promising alternative to the conventional solvents commonly used in metal extraction. This work [...] Read more.
In recent years, noticeable progress has been made in the development of alternative extraction systems characterized by greater sustainability. In this context, deep eutectic solvents (DESs) have emerged as a promising alternative to the conventional solvents commonly used in metal extraction. This work focuses on investigating the extraction of lanthanum in an aqueous solution of sulfuric acid using a deep eutectic solvent, employing molecular dynamics simulations (MD). The structural characteristics of the solvent and its interactions with the components of the aqueous solution are explored. In this study, tetraethylammonium bromide (TEABr) is combined with ethylene glycol (EG) to form a DES, in which sodium cyanide (NaCN) is subsequently solubilized. According to the results obtained from the MD simulation, the primary interactions in the DESs are established through hydrogen bonds between the bromine and the hydrogens of the methyl group of tetraethylammonium at 3.5 Å, as well as between the bromine and the hydrogens of the methylene group of ethylene glycol at 3.5 Å. Similarly, the main interactions between the binary DES and sodium cyanide occur through the hydrogens of the hydroxyl group of EG and the carbon of cyanide at 1.7 Å, and between the oxygen of the hydroxyl group of EG and the sodium at 2.5 Å. In the acidic solution, the primary interaction is highlighted between the lanthanum ion and the oxygen of the bisulfate at 2.8 Å. Additionally, it is observed that the interaction between the DES and the aqueous solution occurs between the lanthanum and the oxygen of the hydroxyl group of EG, as well as between the lanthanum and the carbon of cyanide at 4.4 Å. It is important to note that, when increasing the temperature from 25 to 80 °C, the interaction distance between the lanthanum and the carbon of cyanide decreases to 2.4 Å, suggesting a possible correlation with the increase in lanthanum extraction, as experimentally observed. Overall, this study underscores the importance of considering the fundamental structural interactions of the DES with the lanthanum acid solution, providing an essential theoretical basis for future experimental investigations. Full article
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34 pages, 7952 KB  
Article
MgO Modified by X2, HX, or Alkyl Halide (X = Cl, Br, or I) Catalytic Systems and Their Activity in Chemoselective Transfer Hydrogenation of Acrolein into Allyl Alcohol
by Marek Gliński, Urszula Ulkowska, Zbigniew Kaszkur, Dariusz Łomot and Piotr Winiarek
Molecules 2024, 29(13), 3180; https://doi.org/10.3390/molecules29133180 - 3 Jul 2024
Viewed by 2046
Abstract
A new type of catalyst containing magnesium oxide modified with various modifiers ranging from bromine and iodine, to interhalogen compounds, hydrohalogenic acids, and alkyl halides have been prepared using chemical vapor deposition (CVD) and wet impregnation methods. The obtained systems were characterized using [...] Read more.
A new type of catalyst containing magnesium oxide modified with various modifiers ranging from bromine and iodine, to interhalogen compounds, hydrohalogenic acids, and alkyl halides have been prepared using chemical vapor deposition (CVD) and wet impregnation methods. The obtained systems were characterized using a number of methods: determination of the concentration of X ions, surface area determination, powder X-ray diffraction (PXRD), surface acid–base strength measurements, TPD of probe molecules (acetonitrile, pivalonitrile, triethylamine, and n-butylamine), TPD-MS of reaction products of methyl iodide with MgO, and Fourier transform infrared spectroscopy (FTIR). The catalysts’ activity and chemoselectivity during transfer hydrogenation from ethanol to acrolein to allyl alcohol was measured. A significant increase in the activity of modified MgO (up to 80% conversion) in the transfer hydrogenation of acrolein was found, while maintaining high chemoselectivity (>90%) to allyl alcohol. As a general conclusion, it was shown that the modification of MgO results in the suppression of strong basic sites of the oxide, with a simultaneous appearance of Brønsted acidic sites on its surface. Independently, extensive research on the reaction progress of thirty alkyl halides with MgO was also performed in order to determine its ability to neutralize chlorinated wastes. Full article
(This article belongs to the Section Organic Chemistry)
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14 pages, 3258 KB  
Article
Insights into Halogen-Induced Changes in 4-Anilinoquinazoline EGFR Inhibitors: A Computational Spectroscopic Study
by Sallam Alagawani, Vladislav Vasilyev, Andrew H. A. Clayton and Feng Wang
Molecules 2024, 29(12), 2800; https://doi.org/10.3390/molecules29122800 - 12 Jun 2024
Cited by 2 | Viewed by 1708
Abstract
The epidermal growth factor receptor (EGFR) is a pivotal target in cancer therapy due to its significance within the tyrosine kinase family. EGFR inhibitors like AG-1478 and PD153035, featuring a 4-anilinoquinazoline moiety, have garnered global attention for their potent therapeutic activities. While pre-clinical [...] Read more.
The epidermal growth factor receptor (EGFR) is a pivotal target in cancer therapy due to its significance within the tyrosine kinase family. EGFR inhibitors like AG-1478 and PD153035, featuring a 4-anilinoquinazoline moiety, have garnered global attention for their potent therapeutic activities. While pre-clinical studies have highlighted the significant impact of halogen substitution at the C3’-anilino position on drug potency, the underlying mechanism remains unclear. This study investigates the influence of halogen substitution (X = H, F, Cl, Br, I) on the structure, properties, and spectroscopy of halogen-substituted 4-anilinoquinazoline tyrosine kinase inhibitors (TKIs) using time-dependent density functional methods (TD-DFT) with the B3LYP functional. Our calculations revealed that halogen substitution did not induce significant changes in the three-dimensional conformation of the TKIs but led to noticeable alterations in electronic properties, such as dipole moment and spatial extent, impacting interactions at the EGFR binding site. The UV–visible spectra show that more potent TKI-X compounds typically have shorter wavelengths, with bromine’s peak wavelength at 326.71 nm and hydrogen, with the lowest IC50 nM, shifting its lambda max to 333.17 nm, indicating a correlation between potency and spectral characteristics. Further analysis of the four lowest-lying conformers of each TKI-X, along with their crystal structures from the EGFR database, confirms that the most potent conformer is often not the global minimum structure but one of the low-lying conformers. The more potent TKI-Cl and TKI-Br exhibit larger deviations (RMSD > 0.65 Å) from their global minimum structures compared to other TKI-X (RMSD < 0.15 Å), indicating that potency is associated with greater flexibility. Dipole moments of TKI-X correlate with drug potency (ln(IC50 nM)), with TKI-Cl and TKI-Br showing significantly higher dipole moments (>8.0 Debye) in both their global minimum and crystal structures. Additionally, optical spectral shifts correlate with potency, as TKI-Cl and TKI-Br exhibit blue shifts from their global minimum structures, in contrast to other TKI-X. This suggests that optical reporting can effectively probe drug potency and conformation changes. Full article
(This article belongs to the Special Issue Molecular Spectroscopy in Applied Chemistry)
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13 pages, 4211 KB  
Article
Efficient Adsorption Removal of Tetrabromobisphenol A from Water by Using a Magnetic Composite Fe3O4/GO/ZIF-67
by Sumei Li, Jian Ji, Saisai Shan, Sha Chen, Hanbing Li, Qian Xu and Yixuan Liang
Crystals 2024, 14(6), 508; https://doi.org/10.3390/cryst14060508 - 27 May 2024
Viewed by 1104
Abstract
Tetrabromobisphenol A (TBBPA) is a kind of widely used brominated flame retardant (BFR), which is proven to be harmful to ecological systems and public health. It is very important to remove TBBPA from the environment. In our study, a magnetic composite named Fe [...] Read more.
Tetrabromobisphenol A (TBBPA) is a kind of widely used brominated flame retardant (BFR), which is proven to be harmful to ecological systems and public health. It is very important to remove TBBPA from the environment. In our study, a magnetic composite named Fe3O4/GO/ZIF-67 was synthesized by a coprecipitation method and applied in the highly efficient adsorption of TBBPA from water. Static adsorption experiments demonstrated that the adsorption capacity could reach 232 mg·g−1 within 120 min, which is much higher than those reported in the other literature. The experimental results show that the adsorption of TBBPA on Fe3O4/GO/ZIF-67 followed Langmuir and pseudo-second-order kinetic adsorption models. The main mechanisms for these adsorptions were identified as hydrogen bonds between OH groups in TBBPA and COOHs of Fe3O4/GO/ZIF-67, and π-π stacking between Fe3O4/GO/ZIF-67 and TBBPA. This study provides a method with great promise for the design and synthesis of better adsorbents for the removal of TBBPA from the water environment. Full article
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28 pages, 17235 KB  
Article
Combination of Hydrogen and Halogen Bonds in the Crystal Structures of 5-Halogeno-1H-isatin-3-oximes: Involvement of the Oxime Functionality in Halogen Bonding
by Eric Meier, Wilhelm Seichter and Monika Mazik
Molecules 2024, 29(5), 1174; https://doi.org/10.3390/molecules29051174 - 6 Mar 2024
Cited by 3 | Viewed by 1909
Abstract
Various functional groups have been considered as acceptors for halogen bonds, but the oxime functionality has received very little attention in this context. In this study, we focus on the analysis of the hydrogen and halogen bond preferences observed in the crystal structures [...] Read more.
Various functional groups have been considered as acceptors for halogen bonds, but the oxime functionality has received very little attention in this context. In this study, we focus on the analysis of the hydrogen and halogen bond preferences observed in the crystal structures of 5-halogeno-1H-isatin-3-oximes. These molecules can be involved in various non-covalent interactions, and the competition between these interactions has a decisive influence on their self-organization. In particular, we were interested to see whether the crystal structures of 5-halogeno-1H-isatin-3-oximes, especially bromine- and iodine-substituted ones, are characterized by the presence of halogen bonds formed with the oxime functionality. The oxime group proved its ability to compete with the other strong donor and acceptor sites by participating in the formation of cyclic hydrogen-bonded heterosynthons oxime∙∙∙amide and Ooxime∙∙∙Br/I halogen bonds. Full article
(This article belongs to the Special Issue Exploring Non-bonded Interactions in Macromolecular Chemistry)
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13 pages, 5340 KB  
Communication
Hybrid 2D Supramolecular Organic Frameworks (SOFs) Assembled by the Cooperative Action of Hydrogen and Halogen Bonding and π⋯π Stacking Interactions
by Sergey V. Baykov, Artem V. Semenov, Sofia I. Presnukhina, Marina V. Tarasenko, Anton A. Shetnev, Antonio Frontera, Vadim P. Boyarskiy and Vadim Yu. Kukushkin
Int. J. Mol. Sci. 2024, 25(4), 2062; https://doi.org/10.3390/ijms25042062 - 8 Feb 2024
Cited by 2 | Viewed by 2340
Abstract
The cis- and trans-isomers of 6-(3-(3,4-dichlorophenyl)-1,2,4-oxadiazol-5-yl)cyclohex-3-ene-1-carboxylic acid (cis-A and trans-A) were obtained by the reaction of 3,4-dichloro-N′-hydroxybenzimidamide and cis-1,2,3,6-tetrahydrophthalic anhydride. Cocrystals of cis-A with appropriate solvents (cis-A [...] Read more.
The cis- and trans-isomers of 6-(3-(3,4-dichlorophenyl)-1,2,4-oxadiazol-5-yl)cyclohex-3-ene-1-carboxylic acid (cis-A and trans-A) were obtained by the reaction of 3,4-dichloro-N′-hydroxybenzimidamide and cis-1,2,3,6-tetrahydrophthalic anhydride. Cocrystals of cis-A with appropriate solvents (cis-A‧½(1,2-DCE), cis-A‧½(1,2-DBE), and cis-A‧½C6H14) were grown from 1,2-dichloroethane (1,2-DCE), 1,2-dibromoethane (1,2-DBE), and a n-hexane/CHCl3 mixture and then characterized by X-ray crystallography. In their structures, cis-A is self-assembled to give a hybrid 2D supramolecular organic framework (SOF) formed by the cooperative action of O–H⋯O hydrogen bonding, Cl⋯O halogen bonding, and π⋯π stacking. The self-assembled cis-A divides the space between the 2D SOF layers into infinite hollow tunnels incorporating solvent molecules. The energy contribution of each noncovalent interaction to the occurrence of the 2D SOF was verified by several theoretical approaches, including MEP and combined QTAIM and NCIplot analyses. The consideration of the theoretical data proved that hydrogen bonding (approx. −15.2 kcal/mol) is the most important interaction, followed by π⋯π stacking (approx. −11.1 kcal/mol); meanwhile, the contribution of halogen bonding (approx. −3.6 kcal/mol) is the smallest among these interactions. The structure of the isomeric compound trans-A does not exhibit a 2D SOF architecture. It is assembled by the combined action of hydrogen bonding and π⋯π stacking, without the involvement of halogen bonds. A comparison of the cis-A structures with that of trans-A indicated that halogen bonding, although it has the lowest energy in cis-A-based cocrystals, plays a significant role in the crystal design of the hybrid 2D SOF. The majority of the reported porous halogen-bonded organic frameworks were assembled via iodine and bromine-based contacts, while chlorine-based systems—which, in our case, are structure-directing—were unknown before this study. Full article
(This article belongs to the Special Issue Bonding in Supramolecular Organic Assemblies)
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15 pages, 2268 KB  
Article
Synthesis of Imidazolium Cations Linked to Para-t-Butylcalix[4]arene Frameworks and Their Use as Synthons for Nickel-NHC Complexes Tethered to Calix[4]arenes
by Michael J. Chetcuti, Haithem Naghmouchi, Abdelwaheb Hamdi and Lydia Karmazin
Molecules 2023, 28(15), 5697; https://doi.org/10.3390/molecules28155697 - 27 Jul 2023
Cited by 1 | Viewed by 1662
Abstract
A series of cationic p-tert-butylcalix[4]arenes, with side-arms that are functionalized with imidazolium groups, have been synthesized in good yields. The parent tetrahydroxy para-t-butyl-calix[4]arene was dialkylated at the phenolic hydrogen atoms using α,ω-dibromo-alkanes to yield bis(mono-brominated) alkoxy-chains of variable length. The brominated side-arms in [...] Read more.
A series of cationic p-tert-butylcalix[4]arenes, with side-arms that are functionalized with imidazolium groups, have been synthesized in good yields. The parent tetrahydroxy para-t-butyl-calix[4]arene was dialkylated at the phenolic hydrogen atoms using α,ω-dibromo-alkanes to yield bis(mono-brominated) alkoxy-chains of variable length. The brominated side-arms in these compounds were then further alkylated with substituted imidazoles (N-methylimidazole, N-(2,4,6-trimethyl-phenyl)imidazole, or N-(2,6-di-isopropylphenyl)imidazole) to yield a series of dicationic calixarenes with two imidazolium groups tethered, via different numbers of methylene spacers (n = 2–4), to the calixarene moiety. Related tetracationic compounds, which contain four imidazolium units linked to the calix[4]arene backbone, were also prepared. In all of these compounds, the NMR data show that the calixarenes adopted a cone configuration. All molecules were characterized by NMR spectroscopy and by MS studies. Single crystal X-ray diffraction studies were attempted on many mono-crystals of these cations, but significant disorder problems, partly caused by occluded solvent in the lattice, and lack of crystallinity resulting from partial solvent loss, precluded the good resolution of most X-ray structures. Eventually, good structural data were obtained from an unusually disordered single crystal of 5a, (1,3)-Cone-5,11,17,23-tetra-t-butyl-25,27-di-hydroxy-26,28-di-[2-(N-2,6-diisopropylphenyl-imidazolium)ethoxy]calix[4]arene dibromide and its presumed structure was confirmed. The structure revealed the presence of H-bonded interactions and some evidence of π-stacking. Some of these imidazolium salts were reacted with nickelocene to form the nickel N-heterocyclic carbene (NHC) complexes 7a7d. A bis-carbene nickel complex 8 was also isolated and its structure was established by single crystal X-ray diffraction studies. The structure was disordered and not of high quality, but the structural data corroborated the spectroscopic data. Full article
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23 pages, 6095 KB  
Article
Benzo[1,2-d:4,5-d′]bis([1,2,3]thiadiazole) and Its Bromo Derivatives: Molecular Structure and Reactivity
by Timofey N. Chmovzh, Daria A. Alekhina, Timofey A. Kudryashev, Rinat R. Aysin, Alexander A. Korlyukov and Oleg A. Rakitin
Int. J. Mol. Sci. 2023, 24(10), 8835; https://doi.org/10.3390/ijms24108835 - 16 May 2023
Cited by 1 | Viewed by 4219
Abstract
Benzo[1,2-d:4,5-d′]bis([1,2,3]thiadiazole) (isoBBT) is a new electron-withdrawing building block that can be used to obtain potentially interesting compounds for the synthesis of OLEDs and organic solar cells components. The electronic structure and delocalization in benzo[1,2-d:4,5-d′]bis([1,2,3]thiadiazole), 4-bromobenzo[1,2- [...] Read more.
Benzo[1,2-d:4,5-d′]bis([1,2,3]thiadiazole) (isoBBT) is a new electron-withdrawing building block that can be used to obtain potentially interesting compounds for the synthesis of OLEDs and organic solar cells components. The electronic structure and delocalization in benzo[1,2-d:4,5-d′]bis([1,2,3]thiadiazole), 4-bromobenzo[1,2-d:4,5-d′]bis([1,2,3]thiadiazole), and 4,8-dibromobenzo[1,2-d:4,5-d′]bis([1,2,3]thiadiazole) were studied using X-ray diffraction analysis and ab initio calculations by EDDB and GIMIC methods and were compared to the corresponding properties of benzo[1,2-c:4,5-c′]bis[1,2,5]thiadiazole (BBT). Calculations at a high level of theory showed that the electron affinity, which determines electron deficiency, of isoBBT was significantly smaller than that of BBT (1.09 vs. 1.90 eV). Incorporation of bromine atoms improves the electrical deficiency of bromobenzo-bis-thiadiazoles nearly without affecting aromaticity, which increases the reactivity of these compounds in aromatic nucleophilic substitution reactions and, on the other hand, does not reduce the ability to undergo cross-coupling reactions. 4-Bromobenzo[1,2-d:4,5-d′]bis([1,2,3]thiadiazole) is an attractive object for the synthesis of monosubstituted isoBBT compounds. The goal to find conditions for the selective substitution of hydrogen or bromine atoms at position 4 in order to obtain compounds containing a (het)aryl group in this position and to use the remaining unsubstituted hydrogen or bromine atoms to obtain unsymmetrically substituted isoBBT derivatives, potentially interesting compounds for organic photovoltaic components, was not set before. Nucleophilic aromatic and cross-coupling reactions, along with palladium-catalyzed C-H direct arylation reactions for 4-bromobenzo[1,2-d:4,5-d′]bis([1,2,3]thiadiazole), were studied and selective conditions for the synthesis of monoarylated derivatives were found. The observed features of the structure and reactivity of isoBBT derivatives may be useful for building organic semiconductor-based devices. Full article
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22 pages, 4741 KB  
Article
Inhibitors of the Oncogenic PA2G4-MYCN Protein-Protein Interface
by Hassina Massudi, Jie-Si Luo, Jessica K. Holien, Satyanarayana Gadde, Sukriti Krishan, Mika Herath, Jessica Koach, Brendan W. Stevenson, Michael A. Gorman, Pooja Venkat, Chelsea Mayoh, Xue-Qun Luo, Michael W. Parker, Belamy B. Cheung and Glenn M. Marshall
Cancers 2023, 15(6), 1822; https://doi.org/10.3390/cancers15061822 - 17 Mar 2023
Cited by 2 | Viewed by 3125
Abstract
MYCN is a major oncogenic driver for neuroblastoma tumorigenesis, yet there are no direct MYCN inhibitors. We have previously identified PA2G4 as a direct protein-binding partner of MYCN and drive neuroblastoma tumorigenesis. A small molecule known to bind PA2G4, WS6, significantly decreased tumorigenicity [...] Read more.
MYCN is a major oncogenic driver for neuroblastoma tumorigenesis, yet there are no direct MYCN inhibitors. We have previously identified PA2G4 as a direct protein-binding partner of MYCN and drive neuroblastoma tumorigenesis. A small molecule known to bind PA2G4, WS6, significantly decreased tumorigenicity in TH-MYCN neuroblastoma mice, along with the inhibition of PA2G4 and MYCN interactions. Here, we identified a number of novel WS6 analogues, with 80% structural similarity, and used surface plasmon resonance assays to determine their binding affinity. Analogues #5333 and #5338 showed direct binding towards human recombinant PA2G4. Importantly, #5333 and #5338 demonstrated a 70-fold lower toxicity for normal human myofibroblasts compared to WS6. Structure-activity relationship analysis showed that a 2,3 dimethylphenol was the most suitable substituent at the R1 position. Replacing the trifluoromethyl group on the phenyl ring at the R2 position, with a bromine or hydrogen atom, increased the difference between efficacy against neuroblastoma cells and normal myofibroblast toxicity. The WS6 analogues inhibited neuroblastoma cell phenotype in vitro, in part through effects on apoptosis, while their anti-cancer effects required both PA2G4 and MYCN expression. Collectively, chemical inhibition of PA2G4-MYCN binding by WS6 analogues represents a first-in-class drug discovery which may have implications for other MYCN-driven cancers. Full article
(This article belongs to the Topic Targeting Signaling Networks for Cancer Therapy)
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22 pages, 5514 KB  
Article
Roles of Hydrogen, Halogen Bonding and Aromatic Stacking in a Series of Isophthalamides
by Islam Ali Osman, Vickie McKee, Christian Jelsch and John F. Gallagher
Symmetry 2023, 15(3), 738; https://doi.org/10.3390/sym15030738 - 16 Mar 2023
Cited by 2 | Viewed by 4136
Abstract
The synthesis and spectroscopic characterisation of six bis(5-X-pyridine-2-yl)isophthalamides (X = H, F, Br, Cl, I, NO2) are reported, together with five crystal structure analyses (for X = H, F to I). The isophthalamides span a range of conformations [...] Read more.
The synthesis and spectroscopic characterisation of six bis(5-X-pyridine-2-yl)isophthalamides (X = H, F, Br, Cl, I, NO2) are reported, together with five crystal structure analyses (for X = H, F to I). The isophthalamides span a range of conformations as syn/anti (H-DIP; I-DIP), anti/anti- (F-DIP; Br-DIP) and with both present in ratio 2:1 in Cl-DIP. The essentially isostructural F-DIP and Br-DIP molecules (using strong amide…amide interactions) aggregate into 2D molecular sheets that align with either F/H or Br atoms at the sheet surfaces (interfaces), respectively. Sheets are linked by weak C-H⋯F contacts in F-DIP and by Br⋯Br halogen bonding interactions as a ‘wall of bromines’ at the Br atom rich interfaces in Br-DIP. Cl-DIP is an unusual crystal structure incorporating both syn/anti and anti/anti molecular conformations in the asymmetric unit (Z’ = 3). The I-DIP•½(H2O) hemihydrate structure has a water molecule residing on a twofold axis between two I-DIPs and has hydrogen and N⋯I (Nc = 0.88) halogen bonding. The hydrate is central to an unusual synthon and involved in six hydrogen bonding interactions/contacts. Contact enrichment analysis on the Hirshfeld surface demonstrates that F-DIP, Cl-DIP and Br-DIP have especially over-represented halogen···halogen interactions. With the F-DIP, Cl-DIP and Br-DIP molecules having an elongated skeleton, the formation of layers of halogen atoms in planes perpendicular to the long unit cell axis occurs in the crystal packings. All six DIPs were analysed by ab initio calculations and conformational analysis; comparisons are made between their minimized structures and the five crystal structures. In addition, physicochemical properties are compared and assessed. Full article
(This article belongs to the Special Issue Symmetry in Molecular Aggregation)
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Article
N-Doped Carbon/CeO2 Composite as a Biomimetic Catalyst for Antibacterial Application
by Nan Wang, Xiaofan Zhai, Fang Guan, Ruiyong Zhang, Baorong Hou and Jizhou Duan
Int. J. Mol. Sci. 2023, 24(3), 2445; https://doi.org/10.3390/ijms24032445 - 26 Jan 2023
Cited by 16 | Viewed by 2379
Abstract
Exploring new and high efficiency mimic enzymes is a vital and novel strategy for antibacterial application. Haloperoxidase-like enzymes have attracted wide attention thanks to their amazing catalytic property for hypohalous acid generation from hydrogen peroxide and halides. However, few materials have displayed halogenating [...] Read more.
Exploring new and high efficiency mimic enzymes is a vital and novel strategy for antibacterial application. Haloperoxidase-like enzymes have attracted wide attention thanks to their amazing catalytic property for hypohalous acid generation from hydrogen peroxide and halides. However, few materials have displayed halogenating catalytic performance until now. Herein, we synthesized N-doped C/CeO2 (N-C/CeO2) composite materials by a combination of the liquid and solid-state method. N-C/CeO2 can possess haloperoxidase-like catalytic activity by catalyzing the bromination of organic signaling compounds (phenol red) with H2O2 at a wide range of temperatures (20 °C to 55 °C), with a solution color changing from yellow to blue. Meanwhile, it exhibits high catalytic stability/recyclability in the catalytic reaction. The synthesized N-C/CeO2 composite can effectively catalyze the oxidation of Br with H2O2 to produce HBrO without the presence of phenol red. The produced HBrO can resist typical marine bacteria like Pseudomonas aeruginosa. This study provides an efficient biomimetic haloperoxidase and a novel sustainable method for antibacterial application. Full article
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