Search Results (51)

Understanding the reproductive ecology of birds and the factors influencing nest predation is essential for developing scientifically sound and effective bird conservation strategies. Certain pheasant species sensitive to environmental changes are vulnerable to threats and face survival pressures such as habitat destruction and human activities. However, research related to their reproductive ecology is lacking. Here for the first time we reported information on breeding biology of the Chinese francolin (Francolinus pintadeanus). This study was conducted during the breeding seasons of the Chinese francolin in 2021, 2023, 2024, and 2025, combining traditional survey and infrared camera technology to monitor its reproductive ecology and nest predators in the Datian and Bangxi Reserves and to identify its potential predators through artificial nest experiments. All nests were open-ground nests located at the roots of dwarf shrubs and grasses. Our findings revealed that the breeding season of the Chinese francolin was mainly in March–September, peaking in May; its clutch size was 4.09 ± 1.27 (N = 22), reproductive success was 27.27%, and 16 nests were failed; and all failed nests were predated, with abandoned nests accounting for 93.75% of the failed nests. In artificial nest experiments, the predation rates of Datian Reserve and Bangxi Reserve were 70.91% (N = 55) and 60.00% (N = 30), respectively, with no significant difference in predation rates between the fully covered and exposed groups (Datian: χ² = 0.258, p = 0.612; Bangxi: p = 0.710). Natural nest monitoring and artificial nest experiments on the Chinese francolin identified snakes and the small Indian civet (Viverricula indica) as the main predators in Datian Reserve, as well as the greater coucal (Centropus sinensis) and wild boar (Sus scrofa) as potential predators. In contrast, the main predators in Bangxi Reserve were snakes and rodents. These findings indicate differences in nest predator taxa between the two reserves. We recommend prioritizing the restoration of dwarf scrub vegetation and optimizing the habitat management strategy in these reserves to better protect the breeding habitats of pheasants while promoting long-term stability and continuation of their populations. Full article

The Mediterranean region is increasingly confronted with intersecting environmental, agricultural, and socio-economic challenges, including biowaste accumulation, soil degradation, and high dependency on imported fossil fuels. Biomethane, a renewable substitute for natural gas, offers a strategic solution that aligns with the region’s need for sustainable energy transition and circular resource management. This review examines the current state of biomethane production in the Mediterranean area, with a focus on anaerobic digestion (AD) technologies, feedstock availability, policy drivers, and integration into the circular bioeconomy (CBE) framework. Emphasis is placed on the valorisation of regionally abundant feedstocks such as olive pomace, citrus peel, grape marc, cactus pear (Opuntia ficus-indica) residues, livestock manure, and the Organic Fraction of Municipal Solid Waste (OFMSW). The multifunctionality of AD—producing renewable energy and nutrient-rich digestate—is highlighted for its dual role in reducing greenhouse gas (GHG) emissions and restoring soil health, especially in areas threatened by desertification such as Sicily (Italy), Spain, Malta, and Greece. The review also explores emerging innovations in biogas upgrading, nutrient recovery, and digital monitoring, along with the role of Renewable Energy Directive III (RED III) and national biomethane strategies in scaling up deployment. Case studies and decentralised implementation models underscore the socio-technical feasibility of biomethane systems across rural and insular territories. Despite significant potential, barriers such as feedstock variability, infrastructural gaps, and policy fragmentation remain. The paper concludes with a roadmap for research and policy to advance biomethane as a pillar of Mediterranean climate resilience, energy autonomy and sustainable agriculture within a circular bioeconomy paradigm. Full article

To explore the effects of different plant combinations in ecological floating beds on water quality purification and phytoplankton community structure in shallow eutrophic lakes, we conducted a survey of phytoplankton communities within ecological floating beds featuring distinct plant combinations in Meiliang Bay, Lake Taihu, during June and August 2021. The study focuses on two combinations: EA (Canna indica + Acorus calamus + Phragmites australis) and ES (Canna indica + Oenanthe javanica + Sagittaria sagittifolia). Results indicated that ecological floating beds significantly improved water quality, with the strongest restoration effects observed in the EA area. Specifically, turbidity was reduced by 47–89%, while chlorophyll a (Chl-a) concentration inhibition rates reached 82% in June and 54% in August. The comprehensive trophic state index (TLI) remained stable at levels indicating slight eutrophication (≤58.6). Phytoplankton community structure shifted from dominance by eutrophic functional groups (primarily FG M) toward greater diversity. In the EA area, the number of dominant functional groups increased from five (control) to six, and the abundance of the key cyanobacteria group (FG M) declined from 18.29% (control) to 7.86%. Redundancy analysis (RDA) revealed temporal changes in driving factors: nutrients were primary in June (explanation rate: 64.7%), while physical factors dominated in August (explanation rate: 51.2%). This study demonstrates that installing ecological floating beds with diverse plant combinations in shallow eutrophic lakes can effectively alter phytoplankton community structure and enhance in situ water restoration. Among the tested combinations, EA (Canna indica + Acorus calamus + Phragmites australis) exhibited the optimal restoration effect. These findings provide a scientific basis for water environment protection and aquatic biological resource restoration in shallow eutrophic lakes. Full article

Background/Objectives: To overcome the limitations imposed by bacterial blight on widely adopted indica–japonica hybrid rice, this study employed molecular design breeding strategies to develop a resistant germplasm. Methods: Through conventional backcross breeding combined with molecular-marker-assisted selection, the Xa23-carrying material XR39 was hybridized with the wide-compatibility restorer line R5315 harboring the S5n gene. Progeny selection integrated evaluations of agronomic traits, disease resistance identification, and test-crossing with sterile lines. Results: Five wide-compatibility restorer lines simultaneously incorporating the Xa23 and S5n genes were successfully developed, demonstrating outstanding bacterial blight resistance and restoration ability. The selected hybrid combinations, A3/RP1, A1/RP4, and A4/RP4, exhibited yield increases of 2.6–8.6% compared to the control. Conclusions: This study not only established a novel germplasm for developing bacterial blight-resistant indica–japonica hybrid rice varieties, but also established a model for gene design breeding for rice improvement. Full article

Modern wheat breeding has largely emphasized aboveground traits, often at the expense of belowground characteristics such as root biomass, architecture, and beneficial microbial associations. This has narrowed genetic diversity, impacting traits essential for stress resilience and efficient nutrient and water acquisition—factors expected to become increasingly critical under climate change. In this study, we evaluated 36 primary synthetic (PS) hexaploid wheat lines developed by crossing Aegilops tauschii with the durum wheat cultivar Langdon (LNG) and compared them with LNG and the hexaploid variety Norin 61 (N61). We observed significant variation in root length, biomass, and associations with fungal endophytes, including beneficial Arbuscular Mycorrhizal Fungi (AMF) and Serendipita indica, and pathogenic Alternaria sp. Clustering analysis based on these traits identified three distinct PS groups: (1) lines with greater root length and biomass, high AMF and S. indica colonization, and low Alternaria infection; (2) lines with intermediate traits; and (3) lines with reduced root traits and high Alternaria susceptibility. Notably, these phenotypic patterns corresponded closely with the soil classification of the Ae. tauschii progenitors’ origin, such as Cambisols (supportive of root growth), and Gleysols and Calcisols (restrictive of root growth). This highlights the soil microenvironment as a key determinant of belowground trait expression. By comparing PS lines with domesticated tetraploid and hexaploid wheat, we identified and selected PS lines derived from diverse Ae. tauschii with enhanced root traits. Our study emphasizes the potential of wild D-genome diversity to restore critical root traits for breeding resilient wheat. Full article

Screening and breeding more resistant heat stress restorer lines represent an effective approach to addressing the decline in hybrid rice seed production caused by heat stress (HS). However, the molecular mechanisms affecting the differences in the heat resistance of anthers under HS remain unclear. This study compared the gene expression patterns of two hybrid rice restorer lines with differing heat resistances under HS and discusses the mechanisms of the heat response in rice. Under heat stress, 247 DEGs were co-expressed across varieties and were involved in biological processes such as protein processing and carbon metabolism, with heat shock proteins being the most ubiquitous. Interestingly, a substantial enrichment of genes related to non-structural carbohydrates and ATP was observed among the unique DEGs in R996 and R4628. Simultaneously, the contents of non-structural carbohydrates and ATP levels in the young spikes of R996 were significantly higher than those in R4628. This suggests that starch, soluble sugars and ATP play significant roles in heat tolerance during the flowering stage of rice. Overall, this study provides novel insights into the molecular mechanisms underlying heat stress resistance in indica rice restorer lines and informs future strategies for the genetic improvement of heat tolerance in these varieties. Full article

This study aimed to develop an aromatic thermosensitive genic male sterile (TGMS) line in indica rice using CRISPR/Cas9 technology. The TMS5 and FGR in the high-quality conventional rice variety Huahang 48 were targeted for editing using CRISPR/Cas9 technology. CRISPR/Cas9 vectors designed for TMS5 and FGR were constructed and introduced into rice calli through Agrobacterium-mediated transformation. Transgenic seedlings were subsequently regenerated, and the target sites of the edited plants were analyzed via sequencing. A total of fifteen T₀ double mutants were successfully obtained. Three mutants without T-DNA insertion were screened in the T₁ generation by the PCR detection of hygromycin gene fragments, and homozygous mutants without T-DNA insertion were screened in the T₂ generation by the sequencing analysis of the mutation sites, named Huahang 48s. Huahang 48s exhibited complete sterility at 24 °C and pollen transfer at 23 °C. The 2-acetyl-1-pyrroline (2-AP) content was detected in the young panicles, leaves, and stems of Huahang 48s. The leaves of Huahang 48s had the highest 2-AP content, contrasting with the absence of 2-AP in HuaHang 48. F₁ hybrids that crossed Huahang 48s with two high-quality restorer lines were superior to the two parents in terms of yield per plant and 1000-grain weight. Huahang 48s has a certain combining ability and application potential in two-line cross breeding. The successful application of CRISPR/Cas9 technology in Huahang 48 established a foundation for developing aromatic TGMS lines, providing both theoretical insights and practical materials for breeding efforts. Full article

Despite the successful breeding of hybrid japonica rice by the new strategy (the female parent with a restorer line containing an appropriate proportion of indica rice genes) in China, it remains unclear whether these cultivars exhibit a similar yield performance with the traditional high-yield hybrid cultivars in the Yangtze River region. Therefore, two field experiments were conducted in Fenghua City and Yuyao City, China, during the two growing seasons in 2019 and 2020. Six japonica hybrid rice cultivars and one control indica–japonica hybrid rice cultivar (Yongyou1540 [YY1540]) were chosen as the experimental materials in each year, and the seedling quality, grain yield, and yield components were evaluated. The results showed that the grain yield of YY1540 was 13.9 t ha⁻¹ and 14.5 t ha⁻¹ in 2019 and 2020, respectively, which was the highest among all cultivars in both years. However, the japonica hybrid rice cultivars CHY83 in 2019 and CHY112 in 2020 also achieved high yield performance with 13.7 t ha⁻¹ and 14.0 t ha⁻¹, respectively, which were not significantly difference from YY1540. The japonica hybrid cultivars with a high grain yield typically exhibited more spikelets per panicle, more spikelets per m², and a higher harvest index than those with a lower grain yield. Increasing the total growth duration had a limited impact on the grain yield of japonica hybrid rice. However, the post-heading daily grain yield was significantly positively correlated with grain yield in japonica hybrid rice cultivars. Moreover, significant quadratic relationships were observed between plant height at maturity and grain yield and between seedling dry weight and grain yield. The optimal plant height at maturity and seedling dry weight for achieving a high grain yield in japonica hybrid rice were approximately 130 cm and 300 mg plant⁻¹, respectively. This study provides useful information for breeding high-yield japonica hybrid cultivars. Full article

Background/Objectives: Cold stress poses a significant threat to Asian rice cultivation, disrupting important physiological processes crucial for seedling establishment and overall plant growth. It is, thus, crucial to elucidate genetic pathways involved in cold stress tolerance response mechanisms. Methods: We mapped OsUBC7, a Radiation-sensitive 6 (RAD6)-type homolog of rice, to a low-temperature seedling survivability (LTSS) QTL and used genomics, molecular genetics, and physiological assays to assess its role in plant resilience against low-temperature stress. Results: OsUBC7 is cold responsive and has higher expression levels in cold-tolerant japonica than cold-sensitive indica. Overexpression of OsUBC7 enhances LTSS of indica and freezing tolerance of Arabidopsis, increases levels of soluble sugars and chlorophyll A, boosts leaf development after cold exposure, and increases leaf cell numbers and plants size, but it does not affect membrane stability after cold stress exposure. Additionally, OsUBC7 has a positive role for germinability in the presence of salt and for flowering and yield-related traits. The OsUBC7 protein physically interacts with the developmental stage-specific and histone-modifying E3 ligases OsRFPH2-12 and OsHUB1/2, respectively, and potential target genes such as cell cycle dependent kinases were identified. Conclusions: OsUBC7 might contribute to cold resilience by regulating sugar metabolism to provide energy for promoting cellular homeostasis restoration after cold stress exposure via new cell growth, particularly in leaf cells crucial for photosynthesis and metabolic activity, possibly by interacting with cell cycle regulating proteins. Overall, the present study suggests that OsUBC7 may be involved in plant development, reproduction, and stress adaptation, and contributes to a deeper understanding of rice plant cold stress tolerance response mechanisms. OsUBC7 may be a promising candidate for improving crop productivity and resilience to stressful environments. Full article

Chalkiness is an important grain quality trait in rice. Chalk5, encoding a vacuolar H⁺-translocating pyrophosphatase, is a major gene affecting both the percentage of grains with chalkiness (PGWC) and chalkiness degree (DEC) in rice. Reducing its expression can decrease both PGEC and DEC. In this study, the first exon of Chalk5 was edited in the elite restorer line 9311 using the CRISPR/Cas9 system and two knockout mutants were obtained, one of which did not contain the exogenous Cas9 cassette. PGWC and DEC were both significantly reduced in both mutants, while the seed setting ratio (SSR) was also significantly decreased. Staggered sowing experiments showed that the chalkiness of the mutants was insensitive to temperature during the grain-filling stage, and the head milled rice rate (HMRR) could be improved even under high-temperature conditions. Finally, in the hybrid background, the mutants showed significantly reduced PGWC and DEC without changes in other agronomic traits. The results provide important germplasm and allele resources for breeding high-yield rice varieties with superior quality, especially for high-yield indica hybrid rice varieties with superior quality in high-temperature conditions. Full article

Road construction and strip mining in mountainous regions inevitably causes the destruction of vegetation and soil, leading to large ranges of exposed slopes. Although soil spray-sowing has become a promising method to accelerate community assembly in humid regions, the application of microbial fertilizers and shading in slope recovery during soil spray-sowing are rarely reported in dry-hot valleys. This study compared the effectiveness among artificial seeding, arch column + planting bags, and soil spray-sowing by slope restoration trials in the Yuanjiang dry-hot valley, southwest China. Additionally, we explored the effect of slope degrees, shade, and microbial fertilizers on seedling survival and growth after soil spray-sowing. Results indicated that soil spray-sowing displayed better species survival and growth performance than artificial seeding and arch column + planting bags. The richness, density, and height of seedlings dropped dramatically with the increasing of slope degrees after soil spray-sowing, especially when the slope degree was greater than 1. Although shading observably improved the species density, it inhibited the growth of Albizia julibrissin and Crotalaria pallida. Moreover, microbial fertilizers Penicillium chrysogenum and Bacillus aryabhattai markedly enhanced the density and growth of species Azadirachta Indica, Cajanus cajan, Indigofera cassioides, and Sophora xanthanth. Soil spray-sowing, combined with shading and microbial fertilizers, contributes to species survival and growth when the slope degree is less than 1.73 and the soil spray-sowing process coincides with the rainy season, which provides the theoretical basis and technical support for ecological restoration in the dry-hot river valley. Full article

Microbial community control is crucial for maintaining homeostasis of the gut–liver axis in metabolic dysfunction-associated steatotic liver disease (MASLD). Here, we show that supplementation with a mixture of Mexican foodstuffs (MexMix)—Opuntia ficus indica (nopal), Theobroma cacao (cocoa) and Acheta domesticus (crickets)—enriches several beneficial taxa in MASLD mice and overweight/obese humans. Thus, MexMix induces an important prebiotic effect. In mice, a restoration of intestinal health was observed due to the increased short-chain fatty acids (SCFAs) and intestinal crypt depth, Ocln and Cldn1 expression, and decreased Il6 and Tnfa expression. MexMix significantly reduced steatosis in the mice’s liver and modified the expression of 1668 genes. By PCR, we corroborated a Tnfa and Pparg decrease, and a Cat and Sod increase. In addition, MexMix increased the hepatic NRF2 nuclear translocation and miRNA-34a, miRNA-103, and miRNA-33 decline. In overweight/obese humans, MexMix improved the body image satisfaction and reduced the fat intake. These findings indicate that this new food formulation has potential as a therapeutic approach to treat conditions associated with excessive consumption of fats and sugars. Full article

Aquatic plants play a key role in the structuring and functioning of shallow lake ecosystems. However, eutrophication often triggers shifts in plant communities and species diversity, especially in the early stages when the water is still clear. Additionally, water depth is an important factor regulating aquatic plant communities. We conducted a 50-day mesocosm study to investigate how water depth (50 cm and 100 cm) affected the functional traits (vertical expansion versus horizontal colonisation) of 20 aquatic plants under eutrophic clear-water conditions. Among the selected species, the submerged plants Hydrocotyle vulgaris and Limnophila indica exhibited higher plant height or biomass in deeper water, while the emergent plants Myriophyllum aquaticum showed the opposite trend. Additionally, Ludwigia peploides subsp. stipulacea exhibited better vertical growth than the remaining species, and the submerged species Vallisneria denseserrulata had better horizontal colonisation. There was a positive correlation between plant height and rhizome length, indicating the absence of a trade-off between vertical growth and horizontal expansion. Our findings suggest an overall resilience of aquatic plants to varying water depths within our study range and highlight the importance of analysing functional traits when selecting appropriate species in freshwater ecosystem restoration, particularly in the face of climate change-induced water depth fluctuations. Full article

Anther length is the critical floral trait determining hybrid rice seed production and is controlled by many quantitative trait loci (QTL). However, the cloning of genes specifically controlling anther size has yet to be reported. Here, we report the fine mapping of qAL5.2 for anther size using backcross inbred lines (BILs) in the genetic background of Oryza sativa indica Huazhan (HZ). Gene chip analysis on the BC₄F₂ and BC₅F₁ population identified effective loci on Chr1, Chr5, and Chr8 and two genomic regions on Chr5, named qAL5.1 and qAL5.2. qAL5.2 was identified in both populations with LOD values of 17.54 and 10.19, which explained 35.73% and 25.1% of the phenotypic variances, respectively. Ultimately qAL5.2 was localized to a 73 kb region between HK139 and HK140 on chromosome 5. And we constructed two near-isogenic lines (NILs) for RNA-seq analysis, named NIL-qAL5.2^HZ and NIL-qAL5.2^KLY, respectively. The result of the GO enrichment analysis revealed that differential genes were significantly enriched in the carbohydrate metabolic process, extracellular region, and nucleic acid binding transcription, and KEGG enrichment analysis revealed that alpha-linolenic acid metabolism was significantly enriched. Meanwhile, candidate genes of qAL5.2 were analyzed in RNA-seq, and it was found that ORF8 is differentially expressed between NIL-qAL5.2^HZ and NIL-qAL5.2^KLY. The fine mapping of qAL5.2 conferring anther length will promote the breed improvement of the restorer line and understanding of the mechanisms driving crop mating patterns. Full article

The identification of superior haplotypes and haplotype combinations is essential for haplotype-based breeding (HBB), which provides selection targets for genomics-assisted breeding. In this study, genotypes of 42 functional genes in rice were analyzed by targeted capture sequencing in a panel of 180 Indica rice accessions. In total, 69 SNPs/Indels in seven genes were detected to be associated with grain length (GL), grain width (GW), ratio of grain length–width (L/W) and thousand-grain weight (TGW) using candidate gene-based association analysis, including BG1 and GS3 for GL, GW5 for GW, BG1 and GW5 for L/W, and AET1, SNAC1, qTGW3, DHD1 and GW5 for TGW. Furthermore, two haplotypes were identified for each of the seven genes according to these associated SNPs/Indels, and the amount of genetic variation explained by different haplotypes ranged from 3.24% to 27.66%. Additionally, three, three and eight haplotype combinations for GL, L/W and TGW explained 25.38%, 5.5% and 22.49% of the total genetic variation for each trait, respectively. Further analysis showed that Minghui63 had the superior haplotype combination Haplotype Combination 4 (HC4) for TGW. The most interesting finding was that some widely used restorer lines derived from Minghui63 also have the superior haplotype combination HC4, and our breeding varieties and lines using the haplotype-specific marker panel also confirmed that the TGW of the lines was much higher than that of their sister lines without HC4, suggesting that TGW-HC4 is the superior haplotype combination for TGW and can be utilized in rice breeding. Full article