Search Results (68)

Dickeya solani causes soft rot in potato (Solanum tuberosum L.) tubers. We used bulk RNA-seq to compare the early transcriptional responses of the diploid F₁ genotypes from the mapping population that varied in tuber resistance to D. solani. RNA was collected from wounded tubers inoculated with D. solani (B), wounded tubers treated with sterile water (W), and non-treated tubers (NT) at 8, 24, and 48 hours post-inoculation (hpi). The largest transcriptional divergence between resistant (R) and susceptible (S) genotypes occurred at 8 hpi, with R tubers showing stronger induction of phenylpropanoid biosynthesis, phenylalanine and tyrosine metabolism, amino sugar and nucleotide sugar metabolism, isoquinoline alkaloid biosynthesis, and glutathione metabolism. Phenylpropanoid biosynthesis was dominant in R tubers, in 17 differentially expressed genes (DEGs), consistent with rapid suberin and lignin deposition as a physical barrier. RT-qPCR of nine defence-related genes corroborated the RNA-seq trends. The suberisation-associated anionic peroxidase POPA was located within a QTL for D. solani resistance on chromosome II, supporting its role as a candidate for future functional studies. This is the first transcriptome-based comparison of R and S potato genotypes challenged with D. solani, providing candidate pathways and genes that may guide future molecular breeding once their roles are validated. Full article

Several strains of the genus Serratia isolated from the rhizosphere of crops are plant growth-promoting bacteria (PGPB) that may possess various traits associated with nitrogen metabolism, auxin production, and other characteristics. The objective of the present study was to investigate the in vitro and in vivo characteristics of the growth-promoting activity of S. liquefaciens UNJFSC 002 in potato plants. This strain was inoculated into potato varieties (Solanum tuberosum) under laboratory and greenhouse conditions to determine the bacterial strain’s ability to promote growth under controlled conditions. It was found that the S. liquefaciens strain UNJFSC 002 had a significantly greater effect on the fresh and dry weight of the foliage and induced a higher tuber weight per plant and larger tuber diameter compared to the uninoculated potato plants (p < 0.05). Additionally, in vitro, the strain demonstrated the ability to fix atmospheric nitrogen and produce indole-3-acetic acid (IAA), as well as the capacity to solubilise tricalcium phosphate in the laboratory. This research reveals the potential of S. liquefaciens UNJFSC 002 as an inoculant to improve potato production, demonstrating its ability to promote the growth and productivity of potato varieties suitable for direct consumption and processing under controlled conditions. Full article

The rising global demand for food, including potatoes, necessitates increased crop production. To achieve higher yields, farmers frequently depend on regular applications of nitrogen and phosphate fertilizers. As people seek more environmentally friendly alternatives, biofertilizers are gaining popularity as a potential replacement for synthetic fertilizers. This study aimed to determine how Glomus iranicum affects the growth of potatoes (Solanum tuberosum L.) and the nutritional value of potato tubers when grown alongside broad beans (Vicia faba L.). An experiment was conducted using potatoes tested at five dosage levels of G. iranicum, ranging from 0 to 4 g, to see its impact on the plants and soil. Inoculation with G. iranicum produced variable results in associated potato and bean crops, with significant effects on some variables. In particular, inoculation with 3 g of G. iranicum produced an increase in plant height (24%), leaf dry weight (90%), and tuber dry weight (57%) of potatoes. Similarly, 4 g of G. iranicum produced an increase in the foliar fresh weight (115%), root length (124%), root fresh weight (159%), and root dry weight (243%) of broad beans compared to no inoculation. These findings suggest that G. iranicum could be a helpful biological tool in Andean crops to improve the productivity of potatoes associated with broad beans. This could potentially reduce the need for chemical fertilizers in these crops. Full article

Ectomycorrhizal symbiosis is a cornerstone of ecosystem health, facilitating nutrient uptake, stress tolerance, and biodiversity maintenance in trees. Optimizing Pinus armandii–Tuber indicum mycorrhizal synthesis enhances the ecological stability of coniferous forests while supporting high-value truffle cultivation. This study conducted a pot experiment to compare the effects of three root nutrient regulations—Aolu 318S (containing N-P₂O₅-K₂O in a ratio of 15-9-11 (w/w%)), Aolu 328S (11-11-18), and Youguduo (19-19-19)—on the mycorrhizal synthesis of P. armandii–T. indicum. The results showed that root nutrient supplementation significantly improved the seedling crown, plant height, ground diameter, biomass dry weight, and mycorrhizal infection rate of both the control and mycorrhizal seedlings, with the slow-release fertilizers Aolu 318S and 328S outperforming the quick-release fertilizer Youguduo. The suitable substrate composition in this experiment was as follows: pH 6.53–6.86, organic matter content 43.25–43.49 g/kg, alkali-hydrolyzable nitrogen 89.25–90.3 mg/kg, available phosphorus 83.69–87.32 mg/kg, available potassium 361.5–364.65 mg/kg, exchangeable magnesium 1.17–1.57 mg/kg, and available iron 33.06–37.3 mg/kg. It is recommended to mix the Aolu 318S and 328S solid fertilizers evenly into the substrate, with a recommended dosage of 2 g per plant. These results shed light on the pivotal role of a precise N-P-K ratio regulation in fostering sustainable ectomycorrhizal symbiosis, offering a novel paradigm for integrating nutrient management with mycorrhizal biotechnology to enhance forest restoration efficiency in arid ecosystems. Full article

The synthesis and symbiotic mechanisms of truffle ectomycorrhizae have attracted considerable scientific interest in recent decades. Although previous research has successfully identified the symbiotic partners of truffles (Tuber spp.) and characterized their mature morphological features, the dynamic processes involved in truffle ectomycorrhizal formation remain insufficiently understood. In this study, we established an ectomycorrhizal synthesis system using Castanea mollissima seedlings inoculated with Tuber sinense spore suspensions under controlled greenhouse conditions, followed by an eight-month observation period. To systematically characterize and model the morphological changes during ectomycorrhizal development, we employed an innovative approach integrating resin sectioning with confocal microscopy. Ectomycorrhizal formation was initially observed two months post inoculation, with a colonization rate reaching 24.4 ± 5.3% by the third month. The ectomycorrhizae displayed a distinct color progression from light brown through ochre and finally dark brown, typically manifesting either monopodial or branched structures. Early developmental stages (2–3 months) were characterized by a thin mycelial membrane enveloping the root surface, accompanied by limited hyphal penetration into the root system. By the eighth month, the colonization rate stabilized at 45.2 ± 8.6%, with enhanced organization and density of the fungal mantle and extended Hartig nets reaching the periphery of outer cortical cells. The continuous growth and differentiation of mycorrhizal root tips generated repetitive root architectures, significantly enhancing symbiotic efficiency. These findings provide critical insights into the morphological development and symbiotic effectiveness of truffle ectomycorrhizae while establishing a methodological framework for investigating ectomycorrhizal associations in other economically significant plant–fungal systems. Full article

Bacterial inoculation stimulates growth and adaptation in micropropagated plants. This study evaluated the effects of biotization on in vitro seedling production and in vivo adaptation in two potato cultivars, Agatha and Duvira. Nine bacterial strains were tested for hormone production and ACC deaminase activity and then inoculated in vitro and re-inoculated in vivo. Growth, adaptation, and tuber production were assessed. Biotization significantly enhanced seedling growth, survival, and tuber yield. Biotized seedlings had a 1.3-fold higher survival rate than the controls. Azospirillum brasilense Ab-V5 and Rhizobium tropici CIAT 899 promoted at least one growth variable in both cultivars under in vitro and in vivo conditions. A. brasilense Ab-V5 consistently improved plant performance across production stages, with re-inoculated plants showing 1.2–1.3-fold increases in stem and root length and a 1.1-fold gain in total dry biomass. Additionally, inoculated plants produced 1.9 times more tubers than the controls. Biotization effects were strain-dependent, with A. brasilense Ab-V5 improving in vitro seedling quality and enhancing plant performance and survivability in vivo. Full article

This study explores agroecological practices designed to improve soil quality and crop yield in small-scale agriculture, focusing on soil inoculation with beneficial bacteria over conventional fertilizers. Conducted at the SZIA Agroecological Garden MATE in Gödöllő, Hungary, the research utilizes 12 plots to evaluate different conservation tillage methods, including minimum and no-tillage, with and without microbial inoculation. Commenced in 2022, this study centers on potato cultivation (Solanum tuberosum L.) and includes comprehensive chemical and physical analyses of soil and harvested potatoes, alongside continuous monitoring of growth. Statistical analysis using One-way Anova in R revealed p-values predominantly above 0.05, indicating no significant differences across most parameters, though variations in soil plasticity and pH (KCl) were noted. Results suggest that substantial treatmeent differences may require a longer observation period. Notably, plots with microbial inoculation exhibited higher harvest weights and tuber sizes compared to control plots. Additionally, trends and interactions were found between weed abundance, total harvest, and plant height. The findings indicate that the benefits of integrated agroecological practices, including conservation tillage, may take time to materialize, emphasizing the necessity for extended observation. This research lays the groundwork for future studies, underscoring the importance of patience in achieving improvements in soil health and crop quality through sustainable agricultural methods. Full article

Due to shallow root systems, potato is a particularly drought-sensitive crop. To counteract these limitations, the application of plant growth-promoting microorganisms (PGPMs) is discussed as a strategy to improve nutrient acquisition and biotic and abiotic stress resilience. However, initial root colonization by PGPMs, in particular, can be affected by stress factors that negatively impact root growth and activity or the survival of PGPMs in the rhizosphere. In this study, perspectives for the use of commercial silicate-based soil conditioners (SCs) supposed to improve soil water retention were investigated. The SC products were based on combinations with lignocellulose polysaccharides (Sanoplant^® = SP) or polyacrylate (Geohumus^® = GH). It was hypothesized that SC applications would support beneficial plant–inoculant interactions (arbuscular mycorrhiza, AM: Rhizophagus irregularis MUCL41833, and Pseudomonas brassicacearum 3Re2-7) on a silty loam soil–sand mixture under water-deficit conditions (6–12 weeks at 15–20% substrate water-holding capacity, WHC). Although no significant SC effects on WHC and total plant biomass were detectable, the SC-inoculant combinations increased the proportion of leaf biomass not affected by drought stress symptoms (chlorosis, necrosis) by 66% (SP) and 91% (GH). Accordingly, osmotic adjustment (proline, glycine betaine accumulation) and ROS detoxification (ascorbate peroxidase, total antioxidants) were increased. This was associated with elevated levels of phytohormones involved in stress adaptations (abscisic, jasmonic, salicylic acids, IAA) and reduced ROS (H₂O₂) accumulation in the leaf tissue. In contrast to GH, the SP treatments additionally stimulated AM root colonization. Finally, the SP-inoculant combination significantly increased tuber biomass (82%) under well-watered conditions, and a similar trend was observed under drought stress, reaching 81% of the well-watered control. The P status was sufficient for all treatments, and no treatment differences were observed for stress-protective nutrients, such as Zn, Mn, or Si. By contrast, GH treatments had negative effects on tuber biomass, associated with excess accumulation of Mn and Fe in the leaf tissue close to toxicity levels. The findings suggest that inoculation with the PGPMs in combination with SC products (SP) can promote physiological stress adaptations and AM colonization to improve potato tuber yield, independent of effects on soil water retention. However, this does not apply to SC products in general. Full article

The sustainability of the primary sector is closely linked to meeting the demand for seeds using agro-industrial waste and bioresidues. Sustainability is a multidimensional concept focused on achieving environmental health, social justice, and economic viability. To this end, an experiment was designed based on a combination of biotechnological strategies accessible to many individuals. The first strategy involves the use of compost and vermicompost as cultivation substrates; the second is the in vitro acclimatization of potato plants to these substrates; and the third is the incorporation of Trichoderma asperellum into these substrates to determine the synergistic effect of both. The compost used in this work came from sewage sludge from an agri-food company (Cp); a dining room and pruning waste from a university campus (Cu); and vermicomposted coffee pulp waste (Cv). Each sample was mixed with coconut fiber (Fc) in proportions of 100, 75, 50, and 25%. In the resulting mixtures, María Bonita variety vitroplants were planted and placed in a greenhouse. The biometric response in the three cases indicated a dependence on the type of compost and the proportion of the coconut fiber mixture. The inoculation of Trichoderma asperellum with sewage sludge compost increased stem thickness (42.58%) and mini-tuber weight (6.74%). In contrast, uninoculated treatments showed the best performance in terms of the number of mini-tubers. A 50:50 mixture of sewage sludge compost with coconut fiber and without inoculation of Trichoderma asperellum was the best treatment for the production of pre-basic seeds of the María Bonita potato variety. The use of composted agricultural waste and bioresidues is shown as a valid and low-cost alternative for the sector, even independently of the incorporation of additional inoculants. Full article

Gastrodia elata, commonly known as Tian Ma, is a perennial mycoheterotrophic orchid. Qianyang Tian Ma (QTM), a geographical indication agricultural product from Hongjiang City, Hunan Province, China, is primarily characterized by the red variety, G. elata f. elata. A severe outbreak of tuber brown rot disease was documented in QTM during the harvesting season in Hunan. The fungal pathogen associated with the disease was isolated on potato saccharose agar (PSA) and identified through morphological and phylogenetic analyses. Pathogenicity tests were performed on healthy tubers of G. elata f. elata. The results showed that the representative isolate, named TMB, produced white hyphal colonies with a ring structure, broom-like phialides, partially curved ellipsoidal conidia, and orange–yellow spherical ascocarps on PSA. Phylogenetic analysis of the ITS, LSU, rpb2 and tub2 sequences using Bayesian and maximum-likelihood methods identified the isolate TMB as Clonostachys rosea, based on morphological and phylogenetic data. Pathogenicity tests revealed typical disease symptoms on healthy G. elata tubers 15 days post-inoculation with the isolate TMB. C. rosea is known to cause diseases in economically important crops, but there are no reports of its occurrence on G. elata f. elata in China. This study provides valuable insights into the occurrence, prevention, and control of brown rot disease in G. elata f. elata. Full article

Potatoes (Solanum tuberosum L.) represent an important food in the country’s gastronomy due to their cost, nutritional contribution, and versatility. However, many plant diseases such as the common scab—caused by Streptomyces species—reduce its yield and quality. This study aims to determine Streptomyces species being the causal agent of common scabs in a commercial potato field in the Yaqui Valley, Mexico, while identifying Bacillus strains as a biological control method to mitigate the impact of this disease under field conditions. Thus, three Streptomyces strains were selected from symptomatic samples, and then they were morphologically and molecularly (through sequencing recA and rpoB genes) identified as Streptomyces caniscabiei. After pathogenicity tests, the three strains were found to be pathogenic to potato tubers. In screening assays to identify biocontrol bacteria, strain TSO2^T (Bacillus cabrialesii subsp. tritici) and TE3^T_UV25 (Bacillus subtilis) had the best in vitro biocontrol effect against S. caniscabiei. Then, a field experiment (1 ha per treatment), under commercial conditions, was carried out to analyze the effectivity of these biocontrol bacteria to mitigate the common scabs on potato crops. After four months, the inoculation of this bacterial consortium decreased common scab incidence from 31% to 21% and increased the potato yield up to almost 5 tons/ha vs. the un-inoculated treatment. These findings demonstrate the effectiveness of the studied bacterial consortium as a potential biological control strategy to control common scabs of potato caused by Streptomyces caniscabiei, as well as increase the potato yield in the Yaqui Valley, Mexico. Full article

Crop disease often leads to field epidemics with serious threats to yield. Early symptoms are sometimes difficult to identify, so the origin of primary inoculum is a critical focal point in the study of plant diseases, as it can help design management strategies to reduce crop losses. Here, we investigated whether anthracnose of water yams (Dioscorea alata L.) caused by the species complex Colletotrichum gloeosporioides can start from infected seed tubers from the previous harvest. Over two years, we collected tubers with varying pathogen prevalence in the field directly from producers and conducted fungal isolations in the lab to sample C. gloeosporioides. We also proceeded to artificially inoculate tubers before planting and monitored disease development. Finally, we genotyped isolates from leaves in the fields and assessed fixation indices between plots based on plot ownership (plots with a common seed tuber origin from a single farmer) vs. samples in plots from unrelated producers in Guadeloupe, Martinique, and Barbados. We were unable to isolate the fungus from harvested tubers in either sampling survey nor did any plants grown from inoculated tubers develop any disease symptoms during growth. Also, the genetic structure of samples within each plot was independent of plot ownership, though this occurred with varying levels in the different islands. These results suggest that contaminated planting material from seed tubers is not the primary source of the disease, which is in contrast to the common perception of yam anthracnose prevalence in the Antilles. Full article

Fungi of the genus Tuber are famous for their hypogeous ascomata (truffles), many of which possess noteworthy organoleptic properties. T. aestivum shows a wide geographic distribution, has many plant symbionts and is well adapted to various climatic conditions. In this study, five Quercus taxa native to Greece (i.e., Q. coccifera, Q. ilex, Q. ithaburensis subsp. macrolepis, Q. pubescens and Q. trojana subsp. trojana) were inoculated with spore suspensions obtained from a single ascoma of T. aestivum. The fungal colonization of oak roots was evaluated at three, seven and 12 months after inoculation; the respective colonization rates for each time period were as follows: low to medium (17–41%) for Q. pubescens, Q. ithaburensis subsp. macrolepis and Q. trojana subsp. trojana, medium to relatively high (58–80%) for Q. ithaburensis subsp. macrolepis, Q. ilex, Q. pubescens and Q. trojana subsp. trojana, and medium to high (45–87%) for all oak species examined. Positive correlations were assessed between the number of colonized root tips and the total root tips number, but no significant differences were detected between the inoculated plants and the respective control as regards plant growth. The ectomycorrhizae formed by T. aestivum with Q. ithaburensis subsp. macrolepis and Q. trojana subsp. trojana are described for the first time. The outcome of the study evidences the feasibility of generating the seedlings of various indigenous oak species (covering a large range of diverse habitats) successfully inoculated with autochthonous truffles to be readily used for cultivation purposes. Full article

The study hypothesis proposes that the use of Trichoderma, associated with fertilization with 100% of the recommended phosphorus, may mitigate saline stress and maximize the productivity and quality of the tuberous root. This study aims to evaluate the mitigating effects of phosphate fertilization and Trichoderma harzianum in beet plants under salt stress, by measuring the initial growth, leaf gas exchange, productivity and quality of the beet. The experimental design used was entirely randomized, in a 3 × 2 × 2 factorial scheme, referring to three doses of phosphate fertilization (25%, 50% and 100%), with and without the use of Trichoderma-based inoculation, and two levels of electrical conductivity of the irrigation water (0.5 and 6.2 dS m⁻¹). Salt stress negatively affected the leaf area of the beet. The shoots’ dry mass was reduced as the electrical conductivity of the irrigation water increased, especially in the treatment with the 25% P₂O₅ dose. Salt stress reduced photosynthesis to a greater extent at the 25% P₂O₅ dose and in the absence of Trichoderma harzianum. Increasing the electrical conductivity of the irrigation water reduced transpiration and increased leaf temperature at the 25% P₂O₅ dose and in the presence of Trichoderma harzianum. The 25% P₂O₅ dose increased the stomatal conductance of the beet. The higher electrical conductivity of the irrigation water negatively affected water use efficiency, most significantly at the 25% P₂O₅ dose. Our data showed that the doses of 50% and 100% P₂O₅ were more efficient at increasing the productivity and quality of the beet, with the tuberous root diameter being higher under the lower electrical conductivity of the water and the absence of Trichoderma harzianum. The pH was high under the lowest electrical conductivity of the water, with a dose of 25% P₂O₅ and the absence of Trichoderma harzianum. Full article

Microbial communities are not only an important indicator of soil status but also a determinant of plant nutrition and health levels. Loss of microbial community ecosystem control can directly lead to microbial disease occurrence. During the process of Yuanyang Nanqi wild imitation planting, root rot diseases frequently occur, seriously affecting their yield and quality. Via amplicon sequencing, this study mainly compared the microbial community composition between the rhizosphere soil and roots of healthy and diseased Yuanyang Nanqi with root rot. The α-diversity showed that the microbial community diversity and abundance in the roots of diseased Yuanyang Nanqi were much lower than those of those in healthy specimens, while no significant difference was found in the rhizosphere soil. The β-diversity showed that the bacterial community in the Gejiu region and the fungal community in the Honghe region were significantly different from those in other regions. The species relative abundance map showed that there was no obvious difference in microbial community composition between the rhizosphere soil and roots of healthy and diseased Nanqi, but in diseased specimens with root rot, the proportions of Pseudomonas and Fusarium increased. Based on a functional prediction analysis of FUNGuild, the results showed that the Nanqi roots were mainly pathological saprophytic type and that their rhizosphere soil was mainly saprophytic type. The microorganisms in the roots of Yuanyang Nanqi tubers with root rot were also isolated and identified through the use of the culture method. The possible pathogenic strains were tested via anti-inoculation, and Fusarium oxysporum was identified as one of the main pathogenic fungi of Nanqi root rot, which was consistent with the amplicon sequencing results. These results will help us understand the change trend of microbial communities in healthy and diseased plants and analyze the pathogens involved, the pathogenesis, and the beneficial microorganisms, which would provide a theoretical basis for effective biological control. Full article