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Field Spectroscopy and Radiometry

A special issue of Remote Sensing (ISSN 2072-4292).

Deadline for manuscript submissions: closed (30 November 2015) | Viewed by 129600

Special Issue Editor


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Special Issue Information

Dear Colleagues,

Field spectroscopy has emerged in tandem with space agencies' progress in developing more bands and higher spectral resolutions across the passive remote-sensing domains. Field spectroscopy was first used to understand the interaction of objects with solar electromagnetic radiation, and then to design the best spectral channels for remote sensing the Earth from space. Later, this technology was adopted by other disciplines, which opened new frontiers in the environmental monitoring field, and enabled rapid measurements of targets on the ground. Applications involve precision agriculture, geological prospecting, and monitoring of soil and water contamination. The need for field spectroscopy by many users encouraged electro-optic companies to design and manufacture portable spectrometers for easy operation, resulting in a significant increase in the number and activities of these devices. Today, it would be hard to find any remote-sensing group without one or more portable spectrometers at hand, with other, non-remote-sensing communities also possessing these means. Thus field spectroscopy is no longer simply an accessory tool for remote-sensing activities but rather, stands as an important tool for many applications in all spheres (i.e., the atmosphere, hydrosphere, geosphere, pedosphere, cryosphere, and biosphere). The field spectrometer can be a point or imaging spectrometer covering solar (VIS–NIR–SWIR) or earth (MWIR–LWIR) radiation. In general, field spectroscopy is aimed at understanding the interaction of the targets in question with electromagnetic radiation under better conditions than those available when operating air and orbit sensors. Uses of field spectroscopy include the calibration and validation of remote-sensing sensors and their products, the development of semi- and fully quantitative models for terrestrial applications, the study of interactions between higher spectral resolution radiation and solids, liquids, and gases, and the development of as yet undiscovered applications. The aim of this Special Issue is to cover research dedicated exclusively to field spectroscopy (point or imaging) across the 400–14,000 nm spectral region and to promote further work in this direction. Sensor calibration, spectral modeling, the development of quantitative models for outdoor applications, and of standards and protocols for field measurements, are just a few examples. Relevant fields will include environmental monitoring, civil engineering assessments, precision-agriculture applications, the monitoring of soil and water contamination, the detection of atmospheric pollution and forest management, among others.

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Prof. Dr. Eyal Ben-Dor
Guest Editor

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Keywords

  • point and imaging spectroscopy
  • sensor calibration
  • data mining and quantitative modeling of spectral information
  • spectral applications for portable spectrometers
  • cal/val
  • commercialization of field spectroscopy
  • standardization and protocols for reflectance and emissivity measurements in the field
  • cross-calibration of portable spectrometers
  • spectral library
  • vegetation monitoring using field spectroscopy
  • soil and water contamination using field spectroscopy
  • reflectance and emissivity

Published Papers (16 papers)

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Research

2183 KiB  
Article
Analysis of Red and Far-Red Sun-Induced Chlorophyll Fluorescence and Their Ratio in Different Canopies Based on Observed and Modeled Data
by Micol Rossini, Michele Meroni, Marco Celesti, Sergio Cogliati, Tommaso Julitta, Cinzia Panigada, Uwe Rascher, Christiaan Van der Tol and Roberto Colombo
Remote Sens. 2016, 8(5), 412; https://doi.org/10.3390/rs8050412 - 13 May 2016
Cited by 55 | Viewed by 8285
Abstract
Sun-induced canopy chlorophyll fluorescence in both the red (FR) and far-red (FFR) regions was estimated across a range of temporal scales and a range of species from different plant functional types using high resolution radiance spectra collected on the [...] Read more.
Sun-induced canopy chlorophyll fluorescence in both the red (FR) and far-red (FFR) regions was estimated across a range of temporal scales and a range of species from different plant functional types using high resolution radiance spectra collected on the ground. Field measurements were collected with a state-of-the-art spectrometer setup and standardized methodology. Results showed that different plant species were characterized by different fluorescence magnitude. In general, the highest fluorescence emissions were measured in crops followed by broadleaf and then needleleaf species. Red fluorescence values were generally lower than those measured in the far-red region due to the reabsorption of FR by photosynthetic pigments within the canopy layers. Canopy chlorophyll fluorescence was related to plant photosynthetic capacity, but also varied according to leaf and canopy characteristics, such as leaf chlorophyll concentration and Leaf Area Index (LAI). Results gathered from field measurements were compared to radiative transfer model simulations with the Soil-Canopy Observation of Photochemistry and Energy fluxes (SCOPE) model. Overall, simulation results confirmed a major contribution of leaf chlorophyll concentration and LAI to the fluorescence signal. However, some discrepancies between simulated and experimental data were found in broadleaf species. These discrepancies may be explained by uncertainties in individual species LAI estimation in mixed forests or by the effect of other model parameters and/or model representation errors. This is the first study showing sun-induced fluorescence experimental data on the variations in the two emission regions and providing quantitative information about the absolute magnitude of fluorescence emission from a range of vegetation types. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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5472 KiB  
Article
Evaluation of Continuous VNIR-SWIR Spectra versus Narrowband Hyperspectral Indices to Discriminate the Invasive Acacia longifolia within a Mediterranean Dune Ecosystem
by André Große-Stoltenberg, Christine Hellmann, Christiane Werner, Jens Oldeland and Jan Thiele
Remote Sens. 2016, 8(4), 334; https://doi.org/10.3390/rs8040334 - 15 Apr 2016
Cited by 49 | Viewed by 11109
Abstract
Hyperspectral remote sensing is an effective tool to discriminate plant species, providing vast potential to trace plant invasions for ecological assessments. However, necessary baseline information for the use of remote sensing data is missing for many high-impact invaders. Furthermore, the identification of the [...] Read more.
Hyperspectral remote sensing is an effective tool to discriminate plant species, providing vast potential to trace plant invasions for ecological assessments. However, necessary baseline information for the use of remote sensing data is missing for many high-impact invaders. Furthermore, the identification of the suitable classification algorithms and spectral regions for successfully classifying species remains an open field of research. Here, we tested the separability of the invasive tree Acacia longifolia from adjacent exotic and native vegetation in a Natura 2000 protected Mediterranean dune ecosystem. We used continuous visible, near-infrared and short wave infrared (VNIR-SWIR) data as well as vegetation indices at the leaf and canopy level for classification, comparing five different classification algorithms. We were able to successfully distinguish A. longifolia from surrounding vegetation based on vegetation indices. At the leaf level, radial-basis function kernel Support Vector Machine (SVM) and Random Forest (RF) achieved both a high Sensitivity (SVM: 0.83, RF: 0.78) and a high Positive Predicted Value (PPV) (0.86, 0.83). At the canopy level, RF was the classifier with an optimal balance of Sensitivity (0.75) and PPV (0.75). The most relevant vegetation indices were linked to the biochemical parameters chlorophyll, water, nitrogen, and cellulose as well as vegetation cover, which is in line with biochemical and ecophysiological properties reported for A. longifolia. Our results highlight the potential to use remote sensing as a tool for an early detection of A. longifolia in Mediterranean coastal ecosystems. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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9750 KiB  
Article
A New Method for the Estimation of Broadband Apparent Albedo Using Hyperspectral Airborne Hemispherical Directional Reflectance Factor Values
by Javier F. Calleja, Carmen Recondo, Juanjo Peón, Susana Fernández, Fernando De la Cruz and José González-Piqueras
Remote Sens. 2016, 8(3), 183; https://doi.org/10.3390/rs8030183 - 25 Feb 2016
Cited by 9 | Viewed by 6759
Abstract
The broadband albedo values retrieved from satellite sensors are usually compared directly to ground measurements. Some authors have noted the necessity of high spatial resolution albedo estimates to fill the gap between ground measurements and satellite retrievals. In this respect, hyperspectral airborne data [...] Read more.
The broadband albedo values retrieved from satellite sensors are usually compared directly to ground measurements. Some authors have noted the necessity of high spatial resolution albedo estimates to fill the gap between ground measurements and satellite retrievals. In this respect, hyperspectral airborne data with high spatial resolution is a powerful tool. Here, a new operational method for the calculation of airborne broadband apparent albedo over the spectral range of 350–2500 nm is presented. This new method uses the Hemispherical Directional Reflectance Factor (HDRF) as a proxy for the narrowband albedo, assuming a Lambertian approximation. The broadband apparent albedo obtained is compared to that estimated using theapparent albedo equation devised for the Moderate Resolution Imaging Spectroradiometer (MODIS). Airborne data were collected using the Airborne Hyperspectral Scanner (AHS). Field data were acquired at three sites: a camelina field, a green grass field, and a vineyard. The HDRF can be used to approximate the narrowband albedo for all View Zenith Angle (VZA) values for flights parallel to the solar principal plane (SPP); for flights orthogonal to the SPP, discrepancies are observed when the VZA approaches −45°. Root Mean Square Error (RMSE) values in the range 0.009–0.018 were obtained using the new method, improving upon previous results over the same area (RMSEs of 0.01–0.03). The relative error in the albedo estimation using the new method is 12% for −36.2° < VZA < 40.8° in the case of flights parallel to the SPP and less than 15% for −13° < VZA < 45° and 45% for VZA = −45° for flights orthogonal to the SPP. The good performance of the new method lies in the use of the at-surface solar irradiance and the proposed integration method. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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2622 KiB  
Article
Examining the Spectral Separability of Prosopis glandulosa from Co-Existent Species Using Field Spectral Measurement and Guided Regularized Random Forest
by Nyasha Mureriwa, Elhadi Adam, Anshuman Sahu and Solomon Tesfamichael
Remote Sens. 2016, 8(2), 144; https://doi.org/10.3390/rs8020144 - 15 Feb 2016
Cited by 24 | Viewed by 6373
Abstract
The invasive taxa of Prosopis is rated the world’s top 100 unwanted species, and a lack of spatial data about the invasion dynamics has made the current control and monitoring methods unsuccessful. This study thus tests the use of in situ spectroscopy data [...] Read more.
The invasive taxa of Prosopis is rated the world’s top 100 unwanted species, and a lack of spatial data about the invasion dynamics has made the current control and monitoring methods unsuccessful. This study thus tests the use of in situ spectroscopy data with a newly-developed algorithm, guided regularized random forest (GRRF), to spectrally discriminate Prosopis from coexistent acacia species (Acacia karroo, Acacia mellifera and Ziziphus mucronata) in the arid environment of South Africa. Results show that GRRF was able to reduce the high dimensionality of the spectroscopy data and select key wavelengths (n = 11) for discriminating amongst the species. These wavelengths are located at 356.3 nm, 468.5 nm, 531.1 nm, 665.2 nm, 1262.3 nm, 1354.1 nm, 1361.7 nm, 1376.9 nm, 1407.1 nm, 1410.9 nm and 1414.6 nm. The use of these selected wavelengths increases the overall classification accuracy from 79.19% and a Kappa value of 0.7201 when using all wavelengths to 88.59% and a Kappa of 0.8524 when the selected wavelengths were used. Based on our relatively high accuracies and ease of use, it is worth considering the GRRF method for reducing the high dimensionality of spectroscopy data. However, this assertion should receive considerable additional testing and comparison before it is accepted as a substitute for reliable high dimensionality reduction. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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1352 KiB  
Article
Comparison of Sun-Induced Chlorophyll Fluorescence Estimates Obtained from Four Portable Field Spectroradiometers
by Tommaso Julitta, Lawrence A. Corp, Micol Rossini, Andreas Burkart, Sergio Cogliati, Neville Davies, Milton Hom, Alasdair Mac Arthur, Elizabeth M. Middleton, Uwe Rascher, Anke Schickling and Roberto Colombo
Remote Sens. 2016, 8(2), 122; https://doi.org/10.3390/rs8020122 - 05 Feb 2016
Cited by 57 | Viewed by 8540
Abstract
Remote Sensing of Sun-Induced Chlorophyll Fluorescence (SIF) is a research field of growing interest because it offers the potential to quantify actual photosynthesis and to monitor plant status. New satellite missions from the European Space Agency, such as the Earth Explorer 8 FLuorescence [...] Read more.
Remote Sensing of Sun-Induced Chlorophyll Fluorescence (SIF) is a research field of growing interest because it offers the potential to quantify actual photosynthesis and to monitor plant status. New satellite missions from the European Space Agency, such as the Earth Explorer 8 FLuorescence EXplorer (FLEX) mission—scheduled to launch in 2022 and aiming at SIF mapping—and from the National Aeronautics and Space Administration (NASA) such as the Orbiting Carbon Observatory-2 (OCO-2) sampling mission launched in July 2014, provide the capability to estimate SIF from space. The detection of the SIF signal from airborne and satellite platform is difficult and reliable ground level data are needed for calibration/validation. Several commercially available spectroradiometers are currently used to retrieve SIF in the field. This study presents a comparison exercise for evaluating the capability of four spectroradiometers to retrieve SIF. The results show that an accurate far-red SIF estimation can be achieved using spectroradiometers with an ultrafine resolution (less than 1 nm), while the red SIF estimation requires even higher spectral resolution (less than 0.5 nm). Moreover, it is shown that the Signal to Noise Ratio (SNR) plays a significant role in the precision of the far-red SIF measurements. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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3706 KiB  
Article
Quantitative Estimation of Carbonate Rock Fraction in Karst Regions Using Field Spectra in 2.0–2.5 μm
by Xiangjian Xie, Shufang Tian, Peijun Du, Wenfeng Zhan, Alim Samat and Jike Chen
Remote Sens. 2016, 8(1), 68; https://doi.org/10.3390/rs8010068 - 15 Jan 2016
Cited by 4 | Viewed by 6450
Abstract
Considering the important roles of carbonate rock fraction in karst rocky desertification areas and their potential for indicating damage to vegetation, improved knowledge is desired to assess the application of spectroscopy and remote sensing to characterizing and quantifying the biophysical constituents of karst [...] Read more.
Considering the important roles of carbonate rock fraction in karst rocky desertification areas and their potential for indicating damage to vegetation, improved knowledge is desired to assess the application of spectroscopy and remote sensing to characterizing and quantifying the biophysical constituents of karst landscapes. In this study, we examined the spectra of major surface constituents in karst areas for direct evidence of absorption features attributable to carbonate rock fraction. Using spectral feature analysis with continuum removal, we observed that there are overlapping spectral absorption in 2.149–2.398 μm by soils and non-photosynthetic vegetation. These overlapping features complicated the carbonate absorption feature near 2.340 μm in synthetic mixed spectra. To remove the overprint signal, two hyperspectral carbonate rock indices (HCRIs) were developed. Compared to the absorption features including depths, areas, and KRDSIs (karst rocky desertification synthesis indices), linear regression of HCRIs with carbonate rock fraction in linear synthetic mixtures resulted in higher correlations and lower errors. This study demonstrates that spectral variation of the surface constituents spectra in 2.270–2.398 μm region can indicate carbonate rock fraction and be used to quantify them. Still, additional research is needed to advance our understanding of the spectral influences from carbonate petrography relative to carbonate mineralogy, components and physical state of rock surface. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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2305 KiB  
Article
The Effect of Epidermal Structures on Leaf Spectral Signatures of Ice Plants (Aizoaceae)
by René Hans-Jürgen Heim, Norbert Jürgens, André Große-Stoltenberg and Jens Oldeland
Remote Sens. 2015, 7(12), 16901-16914; https://doi.org/10.3390/rs71215862 - 15 Dec 2015
Cited by 19 | Viewed by 8095
Abstract
Epidermal structures (ES) of leaves are known to affect the functional properties and spectral responses. Spectral studies focused mostly on the effect of hairs or wax layers only. We studied a wider range of different ES and their impact on spectral properties. Additionally, [...] Read more.
Epidermal structures (ES) of leaves are known to affect the functional properties and spectral responses. Spectral studies focused mostly on the effect of hairs or wax layers only. We studied a wider range of different ES and their impact on spectral properties. Additionally, we identified spectral regions that allow distinguishing different ES. We used a field spectrometer to measure ex situ leaf spectral responses from 350 nm–2500 nm. A spectral library for 25 species of the succulent family Aizoaceae was assembled. Five functional types were defined based on ES: flat epidermal cell surface, convex to papillary epidermal cell surface, bladder cells, hairs and wax cover. We tested the separability of ES using partial least squares discriminant analysis (PLS-DA) based on the spectral data. Subsequently, variable importance (VIP) was calculated to identify spectral regions relevant for discriminating our functional types (classes). Classification performance was high, with a kappa value of 0.9 indicating well-separable spectral classes. VIP calculations identified six spectral regions of increased importance for the classification. We confirmed and extended previous findings regarding the visible-near-infrared spectral region. Our experiments also confirmed that epidermal leaf traits can be classified due to clearly distinguishable spectral signatures across species and genera within the Aizoaceae. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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1966 KiB  
Article
Mapping the Spectral Soil Quality Index (SSQI) Using Airborne Imaging Spectroscopy
by Tarin Paz-Kagan, Eli Zaady, Christoph Salbach, Andreas Schmidt, Angela Lausch, Steffen Zacharias, Gila Notesco, Eyal Ben-Dor and Arnon Karnieli
Remote Sens. 2015, 7(11), 15748-15781; https://doi.org/10.3390/rs71115748 - 23 Nov 2015
Cited by 40 | Viewed by 11333
Abstract
Soil quality (SQ) assessment has numerous applications for managing sustainable soil function. Airborne imaging spectroscopy (IS) is an advanced tool for studying natural and artificial materials, in general, and soil properties, in particular. The primary goal of this research was to prove and [...] Read more.
Soil quality (SQ) assessment has numerous applications for managing sustainable soil function. Airborne imaging spectroscopy (IS) is an advanced tool for studying natural and artificial materials, in general, and soil properties, in particular. The primary goal of this research was to prove and demonstrate the ability of IS to evaluate soil properties and quality across anthropogenically induced land-use changes. This aim was fulfilled by developing and implementing a spectral soil quality index (SSQI) using IS obtained by a laboratory and field spectrometer (point scale) as well as by airborne hyperspectral imaging (local scale), in two experimental sites located in Israel and Germany. In this regard, 13 soil physical, biological, and chemical properties and their derived soil quality index (SQI) were measured. Several mathematical/statistical procedures, consisting of a series of operations, including a principal component analysis (PCA), a partial least squares-regression (PLS-R), and a partial least squares-discriminate analysis (PLS-DA), were used. Correlations between the laboratory spectral values and the calculated SQI coefficient of determination (R2) and ratio of performance to deviation (RPD) were R2 = 0.84; RPD = 2.43 and R2 = 0.78; RPD = 2.10 in the Israeli and the German study sites, respectively. The PLS-DA model that was used to develop the SSQI showed high classification accuracy in both sites (from laboratory, field, and imaging spectroscopy). The correlations between the SSQI and the SQI were R2 = 0.71 and R2 = 0.7, in the Israeli and the German study sites, respectively. It is concluded that soil quality can be effectively monitored using the spectral-spatial information provided by the IS technology. IS-based classification of soils can provide the basis for a spatially explicit and quantitative approach for monitoring SQ and function at a local scale. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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1365 KiB  
Article
Towards an Interoperable Field Spectroscopy Metadata Standard with Extended Support for Marine Specific Applications
by Barbara A. Rasaiah, Chris Bellman, Simon. D. Jones, Tim J. Malthus and Chris Roelfsema
Remote Sens. 2015, 7(11), 15668-15701; https://doi.org/10.3390/rs71115668 - 20 Nov 2015
Cited by 5 | Viewed by 5274
Abstract
This paper presents an approach to developing robust metadata standards for specific applications that serves to ensure a high level of reliability and interoperability for a spectroscopy dataset. The challenges of designing a metadata standard that meets the unique requirements of specific user [...] Read more.
This paper presents an approach to developing robust metadata standards for specific applications that serves to ensure a high level of reliability and interoperability for a spectroscopy dataset. The challenges of designing a metadata standard that meets the unique requirements of specific user communities are examined, including in situ measurement of reflectance underwater, using coral as a case in point. Metadata schema mappings from seven existing metadata standards demonstrate that they consistently fail to meet the needs of field spectroscopy scientists for general and specific applications (μ = 22%, σ = 32% conformance with the core metadata requirements and μ = 19%, σ = 18% for the special case of a benthic (e.g., coral) reflectance metadataset). Issues such as field measurement methods, instrument calibration, and data representativeness for marine field spectroscopy campaigns are investigated within the context of submerged benthic measurements. The implication of semantics and syntax for a robust and flexible metadata standard are also considered. A hybrid standard that serves as a “best of breed” incorporating useful modules and parameters within the standards is proposed. This paper is Part 3 in a series of papers in this journal, examining the issues central to a metadata standard for field spectroscopy datasets. The results presented in this paper are an important step towards field spectroscopy metadata standards that address the specific needs of field spectroscopy data stakeholders while facilitating dataset documentation, quality assurance, discoverability and data exchange within large-scale information sharing platforms. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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1085 KiB  
Article
Reducing the Influence of Soil Moisture on the Estimation of Clay from Hyperspectral Data: A Case Study Using Simulated PRISMA Data
by Fabio Castaldi, Angelo Palombo, Simone Pascucci, Stefano Pignatti, Federico Santini and Raffaele Casa
Remote Sens. 2015, 7(11), 15561-15582; https://doi.org/10.3390/rs71115561 - 19 Nov 2015
Cited by 53 | Viewed by 6963
Abstract
Soil moisture hampers the estimation of soil variables such as clay content from remote and proximal sensing data, reducing the strength of the relevant spectral absorption features. In the present study, two different strategies have been evaluated for their ability to minimize the [...] Read more.
Soil moisture hampers the estimation of soil variables such as clay content from remote and proximal sensing data, reducing the strength of the relevant spectral absorption features. In the present study, two different strategies have been evaluated for their ability to minimize the influence of soil moisture on clay estimation by using soil spectra acquired in a laboratory and by simulating satellite hyperspectral data. Simulated satellite data were obtained according to the spectral characteristics of the forthcoming hyperspectral imager on board of the Italian PRISMA satellite mission. The soil datasets were split into four groups according to the water content. For each soil moisture level a prediction model was applied, using either spectral indices or partial least squares regression (PLSR). Prediction models were either specifically developed for the soil moisture level or calibrated using synthetically dry soil spectra, generated from wet soil data. Synthetically dry spectra were obtained using a new technique based on the effects caused by soil moisture on the optical spectrum from 400 to 2400 nm. The estimation of soil clay content, when using different prediction models according to soil moisture, was slightly more accurate as compared to the use of synthetically dry soil spectra, both employing clay indices and PLSR models. The results obtained in this study demonstrate that the a priori knowledge of the soil moisture class can reduce the error of clay estimation when using hyperspectral remote sensing data, such as those that will be provided by the PRISMA satellite mission in the near future. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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12024 KiB  
Article
Estimating Pasture Quality of Fresh Vegetation Based on Spectral Slope of Mixed Data of Dry and Fresh Vegetation—Method Development
by Rachel Lugassi, Alexandra Chudnovsky, Eli Zaady, Levana Dvash and Naftaly Goldshleger
Remote Sens. 2015, 7(6), 8045-8066; https://doi.org/10.3390/rs70608045 - 18 Jun 2015
Cited by 22 | Viewed by 6999
Abstract
The main objective of the present study was to apply a slope-based spectral method to both dry and fresh pasture vegetation. Differences in eight spectral ranges were identified across the near infrared-shortwave infrared (NIR-SWIR) that were indicative of changes in chemical properties. Slopes [...] Read more.
The main objective of the present study was to apply a slope-based spectral method to both dry and fresh pasture vegetation. Differences in eight spectral ranges were identified across the near infrared-shortwave infrared (NIR-SWIR) that were indicative of changes in chemical properties. Slopes across these ranges were calculated and a partial least squares (PLS) analytical model was constructed for the slopes vs. crude protein (CP) and neutral detergent fiber (NDF) contents. Different datasets with different numbers of fresh/dry samples were constructed to predict CP and NDF contents. When using a mixed-sample dataset with dry-to-fresh ratios of 85%:15% and 75%:25%, the correlations of CP (R2 = 0.95, in both) and NDF (R2 = 0.84 and 0.82, respectively) were almost as high as when using only dry samples (0.97 and 0.85, respectively). Furthermore, satisfactory correlations were obtained with a dry-to-fresh ratio of 50%:50% for CP (R2 = 0.92). The results of our study are especially encouraging because CP and NDF contents could be predicted even though some of the selected spectral regions were directly affected by atmospheric water vapor or water in the plants. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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6339 KiB  
Article
Ground-Level Classification of a Coral Reef Using a Hyperspectral Camera
by Tamir Caras and Arnon Karnieli
Remote Sens. 2015, 7(6), 7521-7544; https://doi.org/10.3390/rs70607521 - 05 Jun 2015
Cited by 10 | Viewed by 8543
Abstract
Especially in the remote sensing context, thematic classification is a desired product for coral reef surveys. This study presents a novel statistical-based image classification approach, namely Partial Least Square Discriminant Analysis (PLS-DA), capable of doing so. Three classification models were built and implemented [...] Read more.
Especially in the remote sensing context, thematic classification is a desired product for coral reef surveys. This study presents a novel statistical-based image classification approach, namely Partial Least Square Discriminant Analysis (PLS-DA), capable of doing so. Three classification models were built and implemented for the images while the fourth was a combination of spectra from all three images together. The classification was optimised by using pre-processing transformations (PPTs) and post-classification low-pass filtering. Despite the fact that the images were acquired under different conditions and quality, the best classification model was achieved by combining spectral training samples from three images (accuracy 0.63 for all classes). PPTs improved the classification accuracy by 5%–15% and post-classification treatments further increased the final accuracy by 10%–20%. The fourth classification model was the most accurate one, suggesting that combining spectra from differ conditions improves thematic classification. Despite some limitations, available aerial sensors already provide an opportunity to implement the described classification and mark the next investigation step. Nonetheless, the findings of this study are relevant both to the field of remote sensing in general and to the niche of coral reef spectroscopy. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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2903 KiB  
Article
Potential of VIS-NIR-SWIR Spectroscopy from the Chinese Soil Spectral Library for Assessment of Nitrogen Fertilization Rates in the Paddy-Rice Region, China
by Shuo Li, Wenjun Ji, Songchao Chen, Jie Peng, Yin Zhou and Zhou Shi
Remote Sens. 2015, 7(6), 7029-7043; https://doi.org/10.3390/rs70607029 - 29 May 2015
Cited by 24 | Viewed by 7735
Abstract
To meet growing food demand with limited land and reduced environmental impact, soil testing and formulated fertilization methods have been widely adopted around the world. However, conventional technology for investigating nitrogen fertilization rates (NFR) is time consuming and expensive. Here, we evaluated the [...] Read more.
To meet growing food demand with limited land and reduced environmental impact, soil testing and formulated fertilization methods have been widely adopted around the world. However, conventional technology for investigating nitrogen fertilization rates (NFR) is time consuming and expensive. Here, we evaluated the use of visible near-infrared shortwave-infrared (VIS-NIR-SWIR: 400–2500 nm) spectroscopy for the assessment of NFR to provide necessary information for fast, cost-effective and precise fertilization rating. Over 2000 samples were collected from paddy-rice fields in 10 Chinese provinces; samples were added to the Chinese Soil Spectral Library (CSSL). Two kinds of modeling strategies for NFR, quantitative estimation of soil N prior to classification and qualitative by classification, were employed using partial least squares regression (PLSR), locally weighted regression (LWR), and support vector machine discriminant analogy (SVMDA). Overall, both LWR and SVMDA had moderate accuracies with Cohen’s kappa coefficients of 0.47 and 0.48, respectively, while PLSR had fair accuracy (0.37). We conclude that VIS-NIR-SWIR spectroscopy coupled with the CSSL appears to be a viable, rapid means for the assessment of NFR in paddy-rice soil. Based on qualitative classification of soil spectral data only, it is recommended that the SVMDA be adopted for rapid implementation. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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1106 KiB  
Article
Estimating Cotton Nitrogen Nutrition Status Using Leaf Greenness and Ground Cover Information
by Farrah Melissa Muharam, Stephen J. Maas, Kevin F. Bronson and Tina Delahunty
Remote Sens. 2015, 7(6), 7007-7028; https://doi.org/10.3390/rs70607007 - 29 May 2015
Cited by 19 | Viewed by 6594
Abstract
Assessing nitrogen (N) status is important from economic and environmental standpoints. To date, many spectral indices to estimate cotton chlorophyll or N content have been purely developed using statistical analysis approach where they are often subject to site-specific problems. This study describes and [...] Read more.
Assessing nitrogen (N) status is important from economic and environmental standpoints. To date, many spectral indices to estimate cotton chlorophyll or N content have been purely developed using statistical analysis approach where they are often subject to site-specific problems. This study describes and tests a novel method of utilizing physical characteristics of N-fertilized cotton and combining field spectral measurements made at different spatial scales as an approach to estimate in-season chlorophyll or leaf N content of field-grown cotton. In this study, leaf greenness estimated from spectral measurements made at the individual leaf, canopy and scene levels was combined with percent ground cover to produce three different indices, named TCCLeaf, TCCCanopy, and TCCScene. These indices worked best for estimating leaf N at early flowering, but not for chlorophyll content. Of the three indices, TCCLeaf showed the best ability to estimate leaf N (R2 = 0.89). These results suggest that the use of green and red-edge wavelengths derived at the leaf scale is best for estimating leaf greenness. TCCCanopy had a slightly lower R2 value than TCCLeaf (0.76), suggesting that the utilization of yellow and red-edge wavelengths obtained at the canopy level could be used as an alternative to estimate leaf N in the absence of leaf spectral information. The relationship between TCCScene and leaf N was the lowest (R2 = 0.50), indicating that the estimation of canopy greenness from scene measurements needs improvement. Results from this study confirmed the potential of these indices as efficient methods for estimating in-season leaf N status of cotton. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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Article
Assessing Field Spectroscopy Metadata Quality
by Barbara A. Rasaiah, Simon. D. Jones, Chris Bellman, Tim J. Malthus and Andreas Hueni
Remote Sens. 2015, 7(4), 4499-4526; https://doi.org/10.3390/rs70404499 - 15 Apr 2015
Cited by 9 | Viewed by 5954
Abstract
This paper presents the proposed criteria for measuring the quality and completeness of field spectroscopy metadata in a spectral archive. Definitions for metadata quality and completeness for field spectroscopy datasets are introduced. Unique methods for measuring quality and completeness of metadata to meet [...] Read more.
This paper presents the proposed criteria for measuring the quality and completeness of field spectroscopy metadata in a spectral archive. Definitions for metadata quality and completeness for field spectroscopy datasets are introduced. Unique methods for measuring quality and completeness of metadata to meet the requirements of field spectroscopy datasets are presented. Field spectroscopy metadata quality can be defined in terms of (but is not limited to) logical consistency, lineage, semantic and syntactic error rates, compliance with a quality standard, quality assurance by a recognized authority, and reputational authority of the data owners/data creators. Two spectral libraries are examined as case studies of operationalized metadata policies, and the degree to which they are aligned with the needs of field spectroscopy scientists. The case studies reveal that the metadata in publicly available spectral datasets are underperforming on the quality and completeness measures. This paper is part two in a series examining the issues central to a metadata standard for field spectroscopy datasets. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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Article
Field Spectroscopy in the VNIR-SWIR Region to Discriminate between Mediterranean Native Plants and Exotic-Invasive Shrubs Based on Leaf Tannin Content
by Jan Rudolf Karl Lehmann, André Große-Stoltenberg, Meike Römer and Jens Oldeland
Remote Sens. 2015, 7(2), 1225-1241; https://doi.org/10.3390/rs70201225 - 23 Jan 2015
Cited by 45 | Viewed by 11526
Abstract
The invasive shrub, Acacia longifolia, native to southeastern Australia, has a negative impact on vegetation and ecosystem functioning in Portuguese dune ecosystems. In order to spectrally discriminate A. longifolia from other non-native and native species, we developed a classification model based on [...] Read more.
The invasive shrub, Acacia longifolia, native to southeastern Australia, has a negative impact on vegetation and ecosystem functioning in Portuguese dune ecosystems. In order to spectrally discriminate A. longifolia from other non-native and native species, we developed a classification model based on leaf reflectance spectra (350–2500 nm) and condensed leaf tannin content. High variation of leaf tannin content is common for Mediterranean shrub and tree species, in particular between N-fixing and non-N-fixing species, as well as within the genus, Acacia. However, variation in leaf tannin content has not been studied in coastal dune ecosystems in southwest Portugal. We hypothesized that condensed tannin concentration varies significantly across species, further allowing for distinguishing invasive, nitrogen-fixing A. longifolia from other vegetation based on leaf spectral reflectance data. Spectral field measurements were carried out using an ASD FieldSpec FR spectroradiometer attached to an ASD leaf clip in order to collect 750 in situ leaf reflectance spectra of seven frequent plant species at three study sites in southwest Portugal. We applied partial least squares (PLS) regression to predict the obtained leaf reflectance spectra of A. longifolia individuals to their corresponding tannin concentration. A. longifolia had the lowest tannin concentration of all investigated species. Four wavelength regions (675–710 nm, 1060–1170 nm, 1360–1450 nm and 1630–1740 nm) were identified as being highly correlated with tannin concentration. A spectra-based classification model of the different plant species was calculated using a principal component analysis-linear discriminant analysis (PCA-LDA). The best prediction of A. longifolia was achieved by using wavelength regions between 1360–1450 nm and 1630–1740 nm, resulting in a user’s accuracy of 98.9%. In comparison, selecting the entire wavelength range, the best user accuracy only reached 86.5% for A. longifolia individuals. Full article
(This article belongs to the Special Issue Field Spectroscopy and Radiometry)
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