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Biomolecules, Volume 13, Issue 10

2023 October - 133 articles

Cover Story: This study exploits a unique heme biosynthesis pathway in Gram-positive bacteria to identify novel antimicrobials. The coproheme decarboxylase, chdC, of Listeria monocytogenes, is shown from both views, with both the substrate and inhibitor prodigiosin that was identified on the screen. This is one of several inhibitors of heme biosynthesis in firmicutes that was identified, using the screen described in the accompanying manuscript. These compounds target an essential biosynthetic process that has not been explored previously. We thank Samira Hassan Sheikh for her help in developing the art work that used the 6fxq chdC structure rendered with Pymol. View this paper
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Articles (133)

  • Article
  • Open Access
5 Citations
3,098 Views
21 Pages

Untargeted Lipidomic Approach for Studying Different Nervous System Tissues of the Murine Model of Krabbe Disease

  • Husam B. R. Alabed,
  • Ambra Del Grosso,
  • Valeria Bellani,
  • Lorena Urbanelli,
  • Sara Carpi,
  • Miriam De Sarlo,
  • Lorenzo Bertocci,
  • Laura Colagiorgio,
  • Sandra Buratta and
  • Roberto Maria Pellegrino
  • + 5 authors

23 October 2023

Krabbe disease is a rare neurodegenerative disease with an autosomal recessive character caused by a mutation in the GALC gene. The mutation leads to an accumulation of psychosine and a subsequent degeneration of oligodendrocytes and Schwann cells. P...

  • Article
  • Open Access
5 Citations
5,084 Views
11 Pages

23 October 2023

The CRISPR-Cas system has been widely used for genome editing due to its convenience, simplicity and flexibility. Using a plasmid-carrying Cas protein and crRNA or sgRNA expression cassettes is an efficient strategy in the CRISPR-Cas genome editing s...

  • Article
  • Open Access
3 Citations
3,217 Views
14 Pages

Historical Cohort Study of Congenital Isolated Hypoganglionosis of the Intestine: Determining the Best Surgical Interventions

  • Yohei Yamada,
  • Teizaburo Mori,
  • Nobuhiro Takahashi,
  • Takumi Fujimura,
  • Motohiro Kano,
  • Mototoshi Kato,
  • Masataka Takahashi,
  • Naoki Shimojima,
  • Toshihiko Watanabe and
  • Akihiro Fujino
  • + 3 authors

23 October 2023

No standard diagnostic method or surgical treatment for congenital isolated hypoganglionosis (CIHG) has been established. This study aimed to analyze the clinical outcomes of patients with CIHG and identify the best surgical interventions provided th...

  • Article
  • Open Access
7 Citations
2,763 Views
20 Pages

Designing Nanomedicines for Breast Cancer Therapy

  • Saba Abbasi Dezfouli,
  • Amarnath P. Rajendran,
  • Jillian Claerhout and
  • Hasan Uludag

22 October 2023

In 2020, breast cancer became the most diagnosed cancer worldwide. Conventional chemotherapies have major side effects due to their non-specific activities. Alternatively, short interfering RNA(siRNA)-carrying nanoparticles (NPs) have a high potentia...

  • Article
  • Open Access
7 Citations
3,268 Views
15 Pages

Unraveling the Metabolic Changes in Acute Pancreatitis: A Metabolomics-Based Approach for Etiological Differentiation and Acute Biomarker Discovery

  • Greta Dancu,
  • Cristi Tarta,
  • Carmen Socaciu,
  • Felix Bende,
  • Mirela Danila,
  • Roxana Sirli,
  • Ioan Sporea,
  • Bogdan Miutescu and
  • Alina Popescu

22 October 2023

Acute pancreatitis (AP) remains a challenging medical condition, where a deeper metabolic insight could pave the way for innovative treatments. This research harnessed serum metabolomics to discern potential diagnostic markers for AP and distinguish...

  • Review
  • Open Access
44 Citations
7,041 Views
29 Pages

TRP Channels in Cancer: Signaling Mechanisms and Translational Approaches

  • Matilde Marini,
  • Mustafa Titiz,
  • Daniel Souza Monteiro de Araújo,
  • Pierangelo Geppetti,
  • Romina Nassini and
  • Francesco De Logu

22 October 2023

Ion channels play a crucial role in a wide range of biological processes, including cell cycle regulation and cancer progression. In particular, the transient receptor potential (TRP) family of channels has emerged as a promising therapeutic target d...

  • Communication
  • Open Access
4 Citations
2,654 Views
12 Pages

CETP Expression in Bone-Marrow-Derived Cells Reduces the Inflammatory Features of Atherosclerosis in Hypercholesterolemic Mice

  • Thiago Rentz,
  • Gabriel G. Dorighello,
  • Renata R. dos Santos,
  • Lohanna M. Barreto,
  • Israelle N. Freitas,
  • Carolina M. Lazaro,
  • Daniela S. Razolli,
  • Patricia M. Cazita and
  • Helena C. F. Oliveira

22 October 2023

CETP activity reduces plasma HDL-cholesterol concentrations, a correlate of an increased risk of atherosclerotic events. However, our recent findings suggest that CETP expression in macrophages promotes an intracellular antioxidant state, reduces fre...

  • Review
  • Open Access
71 Citations
14,841 Views
48 Pages

Navigating the ERK1/2 MAPK Cascade

  • Ana Martin-Vega and
  • Melanie H. Cobb

20 October 2023

The RAS-ERK pathway is a fundamental signaling cascade crucial for many biological processes including proliferation, cell cycle control, growth, and survival; common across all cell types. Notably, ERK1/2 are implicated in specific processes in a co...

  • Article
  • Open Access
7 Citations
2,676 Views
23 Pages

Effect of ABA Pre-Treatment on Rice Plant Transcriptome Response to Multiple Abiotic Stress

  • Fatemeh Habibpourmehraban,
  • Farhad Masoomi-Aladizgeh and
  • Paul A. Haynes

20 October 2023

Half of the world’s population depends on rice plant cultivation, yet environmental stresses continue to substantially impact the production of one of our most valuable staple foods. The aim of this study was to investigate the changes in the t...

  • Article
  • Open Access
8 Citations
3,843 Views
15 Pages

Early Resveratrol Treatment Mitigates Joint Degeneration and Dampens Pain in a Mouse Model of Pseudoachondroplasia (PSACH)

  • Jacqueline T. Hecht,
  • Alka C. Veerisetty,
  • Debabrata Patra,
  • Mohammad G. Hossain,
  • Frankie Chiu,
  • Claire Mobed,
  • Francis H. Gannon and
  • Karen L. Posey

20 October 2023

Pseudoachondroplasia (PSACH), a severe dwarfing condition associated with early-onset joint degeneration and lifelong joint pain, is caused by mutations in cartilage oligomeric matrix protein (COMP). The mechanisms underlying the mutant-COMP patholog...

  • Article
  • Open Access
12 Citations
5,748 Views
25 Pages

G Protein-Coupled Receptor Kinase 2 Selectively Enhances β-Arrestin Recruitment to the D2 Dopamine Receptor through Mechanisms That Are Independent of Receptor Phosphorylation

  • Marta Sánchez-Soto,
  • Noelia M. Boldizsar,
  • Kayla A. Schardien,
  • Nora S. Madaras,
  • Blair K. A. Willette,
  • Laura R. Inbody,
  • Christopher Dasaro,
  • Amy E. Moritz,
  • Julia Drube and
  • David R. Sibley
  • + 3 authors

20 October 2023

The D2 dopamine receptor (D2R) signals through both G proteins and β-arrestins to regulate important physiological processes, such as movement, reward circuitry, emotion, and cognition. β-arrestins are believed to interact with G protein-co...

  • Review
  • Open Access
19 Citations
6,745 Views
26 Pages

19 October 2023

Transforming growth factor-β (TGF-β) has attracted attention as a tumor suppressor because of its potent growth-suppressive effect on epithelial cells. Dysregulation of the TGF-β signaling pathway is considered to be one of the key fac...

  • Review
  • Open Access
5 Citations
2,721 Views
21 Pages

19 October 2023

Myo-inositol belongs to one of the sugar alcohol groups known as cyclitols. Phosphatidylinositols are one of the derivatives of Myo-inositol, and constitute important mediators in many intracellular processes such as cell growth, cell differentiation...

  • Review
  • Open Access
29 Citations
6,304 Views
22 Pages

Interaction of Heavy Metal Lead with Gut Microbiota: Implications for Autism Spectrum Disorder

  • Yousef Tizabi,
  • Samia Bennani,
  • Nacer El Kouhen,
  • Bruk Getachew and
  • Michael Aschner

19 October 2023

Autism Spectrum Disorder (ASD), a neurodevelopmental disorder characterized by persistent deficits in social interaction and communication, manifests in early childhood and is followed by restricted and stereotyped behaviors, interests, or activities...

  • Article
  • Open Access
10 Citations
2,255 Views
16 Pages

An Overview of Ovarian Calyx Fluid Proteins of Toxoneuron nigriceps (Viereck) (Hymenoptera: Braconidae): An Integrated Transcriptomic and Proteomic Approach

  • Rosanna Salvia,
  • Carmen Scieuzo,
  • Andrea Boschi,
  • Marco Pezzi,
  • Michele Mistri,
  • Cristina Munari,
  • Milvia Chicca,
  • Heiko Vogel,
  • Flora Cozzolino and
  • Patrizia Falabella
  • + 2 authors

19 October 2023

The larval stages of the tobacco budworm, Heliothis virescens (Fabricius) (Lepidoptera: Noctuidae), are parasitized by the endophagous parasitoid wasp, Toxoneuron nigriceps (Viereck) (Hymenoptera: Braconidae). During the injections of eggs, this para...

  • Article
  • Open Access
5 Citations
2,415 Views
16 Pages

Novel Solution for Using Neural Networks for Kidney Boundary Extraction in 2D Ultrasound Data

  • Tao Peng,
  • Yidong Gu,
  • Shanq-Jang Ruan,
  • Qingrong Jackie Wu and
  • Jing Cai

19 October 2023

Background and Objective: Kidney ultrasound (US) imaging is a significant imaging modality for evaluating kidney health and is essential for diagnosis, treatment, surgical intervention planning, and follow-up assessments. Kidney US image segmentation...

  • Article
  • Open Access
14 Citations
3,627 Views
11 Pages

Optical Genome Mapping Enables Detection and Accurate Sizing of RFC1 Repeat Expansions

  • Stefano Facchini,
  • Natalia Dominik,
  • Arianna Manini,
  • Stephanie Efthymiou,
  • Riccardo Currò,
  • Bianca Rugginini,
  • Elisa Vegezzi,
  • Ilaria Quartesan,
  • Benedetta Perrone and
  • Andrea Cortese
  • + 10 authors

19 October 2023

A recessive Short Tandem Repeat expansion in RFC1 has been found to be associated with cerebellar ataxia, neuropathy and vestibular areflexia syndrome (CANVAS), and to be a frequent cause of late onset ataxia and sensory neuropathy. The usual procedu...

  • Article
  • Open Access
2 Citations
2,972 Views
16 Pages

NanoFIRE: A NanoLuciferase and Fluorescent Integrated Reporter Element for Robust and Sensitive Investigation of HIF and Other Signalling Pathways

  • Alison E. Roennfeldt,
  • Timothy P. Allen,
  • Brooke N. Trowbridge,
  • Michael R. Beard,
  • Murray L. Whitelaw,
  • Darryl L. Russell,
  • David C. Bersten and
  • Daniel J. Peet

19 October 2023

The Hypoxia Inducible Factor (HIF) transcription factors are imperative for cell adaption to low oxygen conditions and development; however, they also contribute to ischaemic disease and cancer. To identify novel genetic regulators which target the H...

  • Review
  • Open Access
36 Citations
7,683 Views
16 Pages

19 October 2023

Reactive oxygen species (ROS) are produced mainly by mitochondrial respiration and function as signaling molecules in the physiological range. However, ROS production is also associated with the pathogenesis of various diseases, including insulin res...

  • Feature Paper
  • Review
  • Open Access
17 Citations
9,123 Views
14 Pages

Understanding the Immunopathology of HTLV-1-Associated Adult T-Cell Leukemia/Lymphoma: A Comprehensive Review

  • Shingo Nakahata,
  • Daniel Enriquez-Vera,
  • M. Ishrat Jahan,
  • Kenji Sugata and
  • Yorifumi Satou

19 October 2023

Human T-cell leukemia virus type-1 (HTLV-1) causes adult T-cell leukemia/lymphoma (ATL). HTLV-1 carriers have a lifelong asymptomatic balance between infected cells and host antiviral immunity; however, 5–10% of carriers lose this balance and d...

  • Article
  • Open Access
24 Citations
3,272 Views
15 Pages

MiRNA and Exosomal miRNA as New Biomarkers Useful to Phenotyping Severe Asthma

  • Piera Soccio,
  • Giorgia Moriondo,
  • Donato Lacedonia,
  • Pasquale Tondo,
  • Dalila Pescatore,
  • Carla Maria Irene Quarato,
  • Mauro Carone,
  • Maria Pia Foschino Barbaro and
  • Giulia Scioscia

18 October 2023

Severe asthma (SA) is a chronic inflammatory disease of the airways. Due to the extreme heterogeneity of symptoms, new biomarkers are currently needed. MiRNAs are non-coding RNAs that negatively regulate gene expression at the post-transcriptional le...

  • Article
  • Open Access
10 Citations
2,124 Views
14 Pages

Association of Cytokine Gene Polymorphisms and Their Impact on Active and Latent Tuberculosis in Brazil’s Amazon Region

  • Ednelza da Silva Graça Amoras,
  • Thais Gouvea de Morais,
  • Rafaella do Nascimento Ferreira,
  • Samara Tatielle Monteiro Gomes,
  • Francisca Dayse Martins de Sousa,
  • Iury de Paula Souza,
  • Ricardo Ishak,
  • Antonio Carlos Rosário Vallinoto and
  • Maria Alice Freitas Queiroz

18 October 2023

Some genetic variations in cytokine genes can alter their expression and influence the evolution of Mycobacterium tuberculosis (Mtb) infection. This study aimed to investigate the association of polymorphisms in cytokine genes and variability in plas...

  • Brief Report
  • Open Access
5 Citations
2,930 Views
13 Pages

Effects of Storage Temperatures on Nitrogen Assimilation and Remobilization during Post-Harvest Senescence of Pak Choi

  • Savitha Dhandapani,
  • Vidya Susan Philip,
  • Shaik Anwar Ahamed Nabeela Nasreen,
  • Alice Mei Xien Tan,
  • Praveen Kumar Jayapal,
  • Rajeev J. Ram and
  • Bong Soo Park

18 October 2023

In the agricultural industry, the post-harvest leafy vegetable quality and shelf life significantly influence market value and consumer acceptability. This study examined the effects of different storage temperatures on leaf senescence, nitrogen assi...

  • Review
  • Open Access
13 Citations
9,484 Views
28 Pages

18 October 2023

Ischemic heart disease (IHD), especially myocardial infarction (MI), is a leading cause of death worldwide. Although coronary reperfusion is the most straightforward treatment for limiting the MI size, it has nevertheless been shown to exacerbate isc...

  • Brief Report
  • Open Access
2 Citations
2,390 Views
11 Pages

Treatment-Emergent Cilgavimab Resistance Was Uncommon in Vaccinated Omicron BA.4/5 Outpatients

  • Cesare Ernesto Maria Gruber,
  • Fabio Giovanni Tucci,
  • Martina Rueca,
  • Valentina Mazzotta,
  • Giulia Gramigna,
  • Alessandra Vergori,
  • Lavinia Fabeni,
  • Giulia Berno,
  • Emanuela Giombini and
  • Fabrizio Maggi
  • + 8 authors

18 October 2023

Mutations in the SARS-CoV-2 Spike glycoprotein can affect monoclonal antibody efficacy. Recent findings report the occurrence of resistant mutations in immunocompromised patients after tixagevimab/cilgavimab treatment. More recently, the Food and Dru...

  • Article
  • Open Access
2 Citations
2,833 Views
18 Pages

Comprehensive Transcriptomic Profiling of m6A Modification in Age-Related Hearing Loss

  • Menglong Feng,
  • Xiaoqing Zhou,
  • Yaqin Hu,
  • Juhong Zhang,
  • Ting Yang,
  • Zhiji Chen and
  • Wei Yuan

18 October 2023

Age-related hearing loss (ARHL), also known as presbycusis, is one of the most common neurodegenerative disorders in elderly individuals and has a prevalence of approximately 70–80% among individuals aged 65 and older. As ARHL is an intricate a...

  • Review
  • Open Access
11 Citations
7,539 Views
31 Pages

Pharmacotherapeutic Approaches to Treatment of Muscular Dystrophies

  • Alan Rawls,
  • Bridget K. Diviak,
  • Cameron I. Smith,
  • Grant W. Severson,
  • Sofia A. Acosta and
  • Jeanne Wilson-Rawls

17 October 2023

Muscular dystrophies are a heterogeneous group of genetic muscle-wasting disorders that are subdivided based on the region of the body impacted by muscle weakness as well as the functional activity of the underlying genetic mutations. A common featur...

  • Review
  • Open Access
6 Citations
3,825 Views
13 Pages

Emerging Roles for Dendritic Cells in Heart Failure

  • Danish Saleh,
  • Rebecca T. L. Jones,
  • Samantha L. Schroth,
  • Edward B. Thorp and
  • Matthew J. Feinstein

17 October 2023

The field of cardio-immunology has emerged from discoveries that define roles for innate and adaptive immune responses associated with myocardial inflammation and heart failure. Dendritic cells (DCs) comprise an important cellular compartment that co...

  • Review
  • Open Access
3 Citations
4,241 Views
26 Pages

17 October 2023

Advanced genomics, transcriptomics, and epigenomics techniques are providing unprecedented insights into the understanding of the molecular underpinnings of the central nervous system, including the neuro-sensory cochlea of the inner ear. Here, we re...

  • Article
  • Open Access
3 Citations
3,239 Views
16 Pages

Biological Applications of Synthetic Binders Isolated from a Conceptually New Adhiron Library

  • Claudia D’Ercole,
  • Matteo De March,
  • Gianluca Veggiani,
  • Sandra Oloketuyi,
  • Rossella Svigelj and
  • Ario de Marco

17 October 2023

Background: Adhirons are small (10 kDa) synthetic ligands that might represent an alternative to antibody fragments and to alternative scaffolds such as DARPins or affibodies. Methods: We prepared a conceptionally new adhiron phage display library th...

  • Article
  • Open Access
4 Citations
2,594 Views
13 Pages

HIF-1α Reduction by Lowering Intraocular Pressure Alleviated Retinal Neovascularization

  • Ziqi Yang,
  • Biyan Ni,
  • Tian Zhou,
  • Zijing Huang,
  • Hong Zhou,
  • Yang Zhou,
  • Shiya Lin,
  • Chang He and
  • Xialin Liu

17 October 2023

Hypoxia-induced retinal neovascularization is a leading cause of blindness worldwide. Oxygen-induced retinopathy (OIR) mouse, a well-established angiogenesis model, has been extensively used to evaluate the effect of anti-angiogenic agents through in...

  • Article
  • Open Access
1 Citations
1,877 Views
16 Pages

Protein Concentration Affects the Food Allergen γ-Conglutin Uptake and Bacteria-Induced Cytokine Production in Dendritic Cells

  • Giuditta C. Heinzl,
  • Danny Blichfeldt Eriksen,
  • Peter Riber Johnsen,
  • Alessio Scarafoni and
  • Hanne Frøkiær

16 October 2023

γ-Conglutin (γ-C) from lupin seeds has been identified as a potent allergen with cross reactivity to peanuts. Here, we investigated how γ-C affected the response in bone marrow-derived dendritic cells (DCs) to bacterial stimuli. &ga...

  • Article
  • Open Access
3 Citations
2,646 Views
11 Pages

GlycA: Evaluation of a New Biomarker of Acute Pancreatitis

  • Ishani Shah,
  • William Yakah,
  • Awais Ahmed,
  • Steven D. Freedman,
  • Zhenghui G. Jiang and
  • Sunil G. Sheth

16 October 2023

Background: Acute pancreatitis (AP) is a leading cause of gastrointestinal hospital admissions, with up to 40% mortality in patients with moderate–severe AP. Glycoprotein acetylation (GlycA) is measured as a nuclear magnetic resonance signal (N...

  • Article
  • Open Access
3 Citations
2,336 Views
20 Pages

Factors Affecting the Bioproduction of Resveratrol by Grapevine Cell Cultures under Elicitation

  • Juan Carlos Vera-Urbina,
  • Susana Sellés-Marchart,
  • Ascensión Martínez-Márquez,
  • María José Martínez-Esteso,
  • María Angeles Pedreño,
  • Jaime Morante-Carriel and
  • Roque Bru-Martínez

16 October 2023

Here we present a study of the characterization and optimization of the production of trans-Resveratrol (t-R) in grape (Vitis vinifera cv. Gamay) cell cultures elicited with methyl jasmonate (MeJA) and dimethyl-β-cyclodextrin (DIMEB). The aim of...

  • Systematic Review
  • Open Access
17 Citations
4,264 Views
15 Pages

The Effectiveness of Cold Atmospheric Plasma (CAP) on Bacterial Reduction in Dental Implants: A Systematic Review

  • Ahmed Yaseen Alqutaibi,
  • Abdulbari Aljohani,
  • Abdullah Alduri,
  • Abdulmajid Masoudi,
  • Anas M. Alsaedi,
  • Hesham Mohammed Al-Sharani,
  • Ahmed E. Farghal,
  • Ahmad Abdulkareem Alnazzawi,
  • Afaf Noman Aboalrejal and
  • Muhammad Sohail Zafar
  • + 1 author

16 October 2023

Background: The emergence of dental implants has revolutionized the management of tooth loss. However, the placement of clinical implants exposes them to complex oral environment and numerous microscopic entities, such as bacteria. Cold atmospheric p...

  • Review
  • Open Access
3 Citations
3,623 Views
12 Pages

Novel Insights into the Role of Chromatin Remodeler MORC2 in Cancer

  • Namita Chutani,
  • Sandhya Ragula,
  • Khajamohiddin Syed and
  • Suresh B. Pakala

15 October 2023

A newly discovered chromatin remodeler, MORC2, is a Microrchidia (MORC) family member. MORC2 acts as a chromatin remodeler by binding to the DNA and changing chromatin conformation using its ATPase domain. MORC2 is highly expressed in a variety of hu...

  • Article
  • Open Access
1 Citations
3,348 Views
16 Pages

Novel Insights on the Role of Epigenetics in Androgen Receptor’s Expression in Prostate Cancer

  • Vânia Camilo,
  • Mariana Brütt Pacheco,
  • Filipa Moreira-Silva,
  • Gonçalo Outeiro-Pinho,
  • Vítor M. Gaspar,
  • João F. Mano,
  • C. Joana Marques,
  • Rui Henrique and
  • Carmen Jerónimo

14 October 2023

The androgens/androgen receptor (AR) axis is the main therapeutic target in prostate cancer (PCa). However, while initially responsive, a subset of tumors loses AR expression through mechanisms putatively associated with epigenetic modifications. In...

  • Article
  • Open Access
5 Citations
2,679 Views
18 Pages

14 October 2023

The myelin sheath provides insulation to the brain’s neuron cells, which aids in signal transmission and communication with the body. Degenerated myelin hampers the connection between the glial cells, which are the front row responders during t...

  • Article
  • Open Access
2 Citations
2,648 Views
15 Pages

Improved Stability and Manufacturability of Nucleocapsid Antigens for SARS-CoV2 Diagnostics through Protein Engineering

  • Esha Shukla,
  • Lipsa Choudhury,
  • Saurabh Rastogi,
  • Arshmeet Chawla,
  • Sanghati Bhattacharya,
  • Umesh Kaushik,
  • Manan Mittal,
  • Anurag Singh Rathore and
  • Gaurav Pandey

14 October 2023

The COVID-19 pandemic has had a significant impact on human health management. A rapid diagnosis of SARS-CoV2 at the point-of-care (POC) is critical to prevent disease spread. As a POC device for remote settings, a LFIA should not require cold-chain...

  • Article
  • Open Access
3 Citations
3,020 Views
13 Pages

Identifying Suitable Reference Gene Candidates for Quantification of DNA Damage-Induced Cellular Responses in Human U2OS Cell Culture System

  • Nikolett Barta,
  • Nóra Ördög,
  • Vasiliki Pantazi,
  • Ivett Berzsenyi,
  • Barbara N. Borsos,
  • Hajnalka Majoros,
  • Zoltán G. Páhi,
  • Zsuzsanna Ujfaludi and
  • Tibor Pankotai

13 October 2023

DNA repair pathways trigger robust downstream responses, making it challenging to select suitable reference genes for comparative studies. In this study, our goal was to identify the most suitable housekeeping genes to perform comparable molecular an...

  • Feature Paper
  • Review
  • Open Access
13 Citations
4,011 Views
15 Pages

The Molecular Mechanisms of Complement Receptor 1—It Is Complicated

  • Matthew P. Hardy,
  • Mariam Mansour,
  • Tony Rowe and
  • Sandra Wymann

13 October 2023

Human complement receptor 1 (CR1) is a membrane-bound regulator of complement that has been the subject of recent attempts to generate soluble therapeutic compounds comprising different fragments of its extracellular domain. This review will focus on...

  • Review
  • Open Access
18 Citations
4,736 Views
34 Pages

Functional Consequences of Pathogenic Variants of the GJB2 Gene (Cx26) Localized in Different Cx26 Domains

  • Olga L. Posukh,
  • Ekaterina A. Maslova,
  • Valeriia Yu. Danilchenko,
  • Marina V. Zytsar and
  • Konstantin E. Orishchenko

13 October 2023

One of the most common forms of genetic deafness has been predominantly associated with pathogenic variants in the GJB2 gene, encoding transmembrane protein connexin 26 (Cx26). The Cx26 molecule consists of an N-terminal domain (NT), four transmembra...

  • Article
  • Open Access
5 Citations
2,147 Views
20 Pages

Quantitative Phosphoproteomic Analysis Provides Insights into the Sodium Bicarbonate Responsiveness of Glycine max

  • Qiang Li,
  • Minglong Li,
  • Huiying Ma,
  • Man Xue,
  • Tong Chen,
  • Xiaodong Ding,
  • Shuzhen Zhang and
  • Jialei Xiao

13 October 2023

Sodium bicarbonate stress caused by NaHCO3 is one of the most severe abiotic stresses affecting agricultural production worldwide. However, little attention has been given to the molecular mechanisms underlying plant responses to sodium bicarbonate s...

  • Review
  • Open Access
54 Citations
15,397 Views
25 Pages

Exploring the Multifaceted Nexus of Uric Acid and Health: A Review of Recent Studies on Diverse Diseases

  • Masanari Kuwabara,
  • Tomoko Fukuuchi,
  • Yuhei Aoki,
  • Einosuke Mizuta,
  • Motoshi Ouchi,
  • Masafumi Kurajoh,
  • Tatsuya Maruhashi,
  • Atsushi Tanaka,
  • Nagisa Morikawa and
  • Kohtaro Abe
  • + 11 authors

13 October 2023

The prevalence of patients with hyperuricemia or gout is increasing worldwide. Hyperuricemia and gout are primarily attributed to genetic factors, along with lifestyle factors like consuming a purine-rich diet, alcohol and/or fructose intake, and phy...

  • Article
  • Open Access
4 Citations
2,575 Views
17 Pages

Nano-Architecture of Persistent Focal DNA Damage Regions in the Minipig Epidermis Weeks after Acute γ-Irradiation

  • Harry Scherthan,
  • Beatrice Geiger,
  • David Ridinger,
  • Jessica Müller,
  • Diane Riccobono,
  • Felix Bestvater,
  • Matthias Port and
  • Michael Hausmann

13 October 2023

Exposure to high acute doses of ionizing radiation (IR) can induce cutaneous radiation syndrome. Weeks after such radiation insults, keratinocyte nuclei of the epidermis exhibit persisting genomic lesions that present as focal accumulations of DNA do...

  • Article
  • Open Access
3 Citations
2,576 Views
18 Pages

Identification of miR-128 Target mRNAs That Are Expressed in B Cells Using a Modified Dual Luciferase Vector

  • Sandra Schreiber,
  • Patrick Daum,
  • Heike Danzer,
  • Manuela Hauke,
  • Hans-Martin Jäck and
  • Jürgen Wittmann

13 October 2023

MicroRNAs (miRNAs) are 21–25 nucleotide long non-coding ribonucleic acids that modulate gene expression by degrading transcripts or inhibiting translation. The miRNA miR-128, originally thought to be brain-specific, was later also found in immu...

  • Article
  • Open Access
8 Citations
3,901 Views
15 Pages

12 October 2023

Single-cell RNA sequencing (scRNA-seq) technology has significantly advanced our understanding of the diversity of cells and how this diversity is implicated in diseases. Yet, translating these findings across various scRNA-seq datasets poses challen...

  • Review
  • Open Access
62 Citations
8,316 Views
21 Pages

Iturin: A Promising Cyclic Lipopeptide with Diverse Applications

  • Deepak A. Yaraguppi,
  • Zabin K. Bagewadi,
  • Ninganagouda R. Patil and
  • Nitin Mantri

12 October 2023

This comprehensive review examines iturin, a cyclic lipopeptide originating from Bacillus subtilis and related bacteria. These compounds are structurally diverse and possess potent inhibitory effects against plant disease-causing bacteria and fungi....

  • Article
  • Open Access
10 Citations
2,501 Views
17 Pages

DAEMDA: A Method with Dual-Channel Attention Encoding for miRNA–Disease Association Prediction

  • Benzhi Dong,
  • Weidong Sun,
  • Dali Xu,
  • Guohua Wang and
  • Tianjiao Zhang

12 October 2023

A growing number of studies have shown that aberrant microRNA (miRNA) expression is closely associated with the evolution and development of various complex human diseases. These key biomarkers’ identification and observation are significant fo...

  • Article
  • Open Access
12 Citations
2,566 Views
20 Pages

12 October 2023

tRNA-derived small RNAs (tDRs) are dysregulated in several diseases, including pancreatic cancer (PC). However, only a limited number of tDRs involved in PC progression are known. Herein, a novel tDR, 5′-tRF-19-Q1Q89PJZ (tRF-19-Q1Q89PJZ), was v...

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Biomolecules - ISSN 2218-273X