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Advances in Fluorescent Probe Technology

A special issue of Molecules (ISSN 1420-3049). This special issue belongs to the section "Bioorganic Chemistry".

Deadline for manuscript submissions: closed (31 March 2024) | Viewed by 18990

Special Issue Editors

School of Chemical Engineering and Pharmacy, Wuhan Institute of Technology, Wuhan 430205, China
Interests: fluorescent probe; sensors; bioimaging; target recognition; bioanalysis

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Guest Editor
College of Chemistry and Chemical Engineering, Inner Mongolia Key Laboratory of Fine Organic Synthesis, Inner Mongolia University, Hohhot 010021, China
Interests: organic luminescent materials

Special Issue Information

Dear Colleagues,

Fluorescent probe technology is a widely used analytical method with huge potential which has been applied to the environmental, food, and medical fields. It has several advantages, including simple operation, rapid response, good selectivity, high sensitivity, and non-invasiveness. The rational design of fluorescent probes can detect various analytes, such as ions, small molecules, and biomacromolecules (proteins) both in vitro and in vivo, which are crucial for pollutant detection, food safety, and disease diagnosis. Furthermore, excellent fluorescent probes can help to analyze the occurrence and the development of biological events. Therefore, developing methods of novel fluorescent probes based on small molecules, nanomaterial, etc. possess broad application prospects in our life.

This Special Issue of Molecules aims to support fluorescent probe technology with novel structures, mechanisms, functions, and applications in the environmental, food, and medicine fields. This Special Issue will include original research articles, reviews, and short communications related to sensors, bioimaging, target recognition, and bioanalysis of fluorescent probes, among others.

Dr. Qi Sun
Prof. Dr. Jianguo Wang
Guest Editors

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Keywords

  • fluorescent probe
  • sensors
  • bioimaging
  • target recognition
  • bioanalysis
  • probe designing
  • biomolecule

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Published Papers (9 papers)

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Research

Jump to: Review

20 pages, 19943 KiB  
Article
Polyamine Derived Photosensitizer: A Novel Approach for Photodynamic Therapy of Cancer
by Hao Deng, Ke Xie, Liling Hu, Xiaowen Liu, Qingyun Li, Donghui Xie, Fengyi Xiang, Wei Liu, Weihong Zheng, Shuzhang Xiao, Jun Zheng and Xiao Tan
Molecules 2024, 29(17), 4277; https://doi.org/10.3390/molecules29174277 - 9 Sep 2024
Viewed by 781
Abstract
Polyamines play a pivotal role in cancer cell proliferation. The excessive polyamine requirement of these malignancies is satisfied through heightened biosynthesis and augmented extracellular uptake via the polyamine transport system (PTS) present on the cell membrane. Meanwhile, photodynamic therapy (PDT) emerges as an [...] Read more.
Polyamines play a pivotal role in cancer cell proliferation. The excessive polyamine requirement of these malignancies is satisfied through heightened biosynthesis and augmented extracellular uptake via the polyamine transport system (PTS) present on the cell membrane. Meanwhile, photodynamic therapy (PDT) emerges as an effective anti-cancer treatment devoid of drug resistance. Recognizing these intricacies, our study devised a novel polyamine-derived photosensitizer (PS) for targeted photodynamic treatment, focusing predominantly on pancreatic cancer cells. We synthesized and evaluated novel spermine-derived fluorescent probes (N2) and PS (N3), exhibiting selectivity towards pancreatic cancer cells via PTS. N3 showed minimal dark toxicity but significant phototoxicity upon irradiation, effectively causing cell death in vitro. A significant reduction in tumor volume was observed post-treatment with no pronounced dark toxicity using the pancreatic cancer CDX mouse model, affirming the therapeutic potential of N3. Overall, our findings introduce a promising new strategy for cancer treatment, highlighting the potential of polyamine-derived PSs in PDT. Full article
(This article belongs to the Special Issue Advances in Fluorescent Probe Technology)
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13 pages, 2148 KiB  
Article
Sensing and Microbiological Activity of a New Blue Fluorescence Polyamidoamine Dendrimer Modified with 1,8-Naphthalimide Units
by Ivo Grabchev, Albena Jordanova, Evgenia Vasileva-Tonkova and Ivan L. Minkov
Molecules 2024, 29(9), 1960; https://doi.org/10.3390/molecules29091960 - 25 Apr 2024
Viewed by 1146
Abstract
A novel second-generation blue fluorescent polyamidoamine dendrimer peripherally modified with sixteen 4-N,N-dimethylaninoethyloxy-1,8-naphthalimide units was synthesized. Its basic photophysical characteristics were investigated in organic solvents of different polarity. It was found that in these solvents, the dendrimer is colorless and emitted blue [...] Read more.
A novel second-generation blue fluorescent polyamidoamine dendrimer peripherally modified with sixteen 4-N,N-dimethylaninoethyloxy-1,8-naphthalimide units was synthesized. Its basic photophysical characteristics were investigated in organic solvents of different polarity. It was found that in these solvents, the dendrimer is colorless and emitted blue fluorescence with different intensities depending on their polarity. The effect of the pH of the medium on the fluorescence intensity was investigated and it was found that in the acidic medium, the fluorescence is intense and is quenched in the alkaline medium. The ability of the dendrimer to detect metal ions (Pb2+, Zn2+, Mg2+, Sn2+, Ba2+, Ni2+, Sn2+, Mn2+, Co2+, Fe3+, and Al3+) was also investigated, and it was found that in the presence of Fe3+, the fluorescent intensity was amplified more than 66 times. The antimicrobial activity of the new compound has been tested in vitro against Gram-positive B. cereus and Gram-negative P. aeruginosa. The tests were performed in the dark and after irradiation with visible light. The antimicrobial activity of the compound enhanced after light irradiation and B. cereus was found slightly more sensitive than P. aeruginosa. The increase in antimicrobial activity after light irradiation is due to the generation of singlet oxygen particles, which attack bacterial cell membranes. Full article
(This article belongs to the Special Issue Advances in Fluorescent Probe Technology)
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14 pages, 3695 KiB  
Article
Design and Synthesis of Novel Squaraine-Based Fluorescent Probe for Far-Red Detection of Chymotrypsin Enzyme
by Shekhar Gupta, Priyanka Balyan, Sai Kiran Mavileti, Shyam S. Pandey and Tamaki Kato
Molecules 2024, 29(6), 1282; https://doi.org/10.3390/molecules29061282 - 14 Mar 2024
Cited by 1 | Viewed by 1704
Abstract
Chymotrypsin, a crucial enzyme in human digestion, catalyzes the breakdown of milk proteins, underscoring its significance in both health diagnostics and dairy quality assurance. Addressing the critical need for rapid, cost-effective detection methods, we introduce a groundbreaking approach utilizing far-red technology and HOMO-Förster [...] Read more.
Chymotrypsin, a crucial enzyme in human digestion, catalyzes the breakdown of milk proteins, underscoring its significance in both health diagnostics and dairy quality assurance. Addressing the critical need for rapid, cost-effective detection methods, we introduce a groundbreaking approach utilizing far-red technology and HOMO-Förster resonance energy transfer (FRET). Our novel probe, SQ-122 PC, features a unique molecular design that includes a squaraine dye (SQ), a peptide linker, and SQ moieties synthesized through solid-phase peptide synthesis. Demonstrating a remarkable quenching efficiency of 93.75% in a tailored H2O:DMSO (7:3) solvent system, our probe exhibits absorption and emission properties within the far-red spectrum, with an unprecedented detection limit of 0.130 nM. Importantly, our method offers unparalleled selectivity towards chymotrypsin, ensuring robust and accurate enzyme detection. This pioneering work underscores the immense potential of far-red-based homo-FRET systems in enabling the sensitive and specific detection of chymotrypsin enzyme activity. By bridging the gap between cutting-edge technology and biomedical diagnostics, our findings herald a new era of enzyme sensing, promising transformative advancements in disease diagnosis and dairy quality control. Full article
(This article belongs to the Special Issue Advances in Fluorescent Probe Technology)
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11 pages, 6932 KiB  
Communication
A Novel Fluorescence Sensor for Iodide Detection Based on the 1,3-Diaryl Pyrazole Unit with AIE and Mechanochromic Fluorescence Behavior
by Lili Deng, Jian Xiong, Wenqin Liu, Lixue Wu, Huiyi Hu, Jiaqing Wu, Yue Liu, Lide Yu, Yuling Zhou, Wenjun Gao, Haifeng He and Weiyan Yin
Molecules 2023, 28(20), 7111; https://doi.org/10.3390/molecules28207111 - 16 Oct 2023
Cited by 3 | Viewed by 1682
Abstract
A D−A type of luminophore, TPA-CDP, was designed and synthesized by using triphenylamine (TPA) as D (electron donor), 1,3-diaryl pyrazole with cyano groups (CDP) as A (electron acceptor) and employing a cyanovinyl segment as a recognition group. Firstly, TPA-CDP demonstrates effective fluorescence quenching [...] Read more.
A D−A type of luminophore, TPA-CDP, was designed and synthesized by using triphenylamine (TPA) as D (electron donor), 1,3-diaryl pyrazole with cyano groups (CDP) as A (electron acceptor) and employing a cyanovinyl segment as a recognition group. Firstly, TPA-CDP demonstrates effective fluorescence quenching as a sensor for I by the nucleophilic addition reaction of the cyanovinyl segment with a high level of sensitivity, selectivity and a low determination limit of 4.43 μM. Interestingly, TPA-CDP exhibited an AIE phenomenon with the fw value reaching 50%. In addition, TPA-CDP displayed distinct mechanochromic fluorescence behavior with 70 nm red shift, which was observed over four repeated cycles. Furthermore, the mechanochromic fluorescence behavior of TPA-CDP, as observed in powder XRD experiments, was found to be associated with the morphological transition from a crystalline state to an amorphous state. These results confirm the significant potential of CDP as a powerful electron-deficient component in the creation of D−A-type mechanochromic fluorescence materials and biosensors for detecting I. Full article
(This article belongs to the Special Issue Advances in Fluorescent Probe Technology)
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11 pages, 2240 KiB  
Article
Enantioselective Labeling of Zebrafish for D-Phenylalanine Based on Graphene-Based Nanoplatform
by Yuqing He, Ziqi Ye, Fei Zhu, Tianxiang Qiu, Xiyan Dai, Yue Xie, Shibiao Zou, Qingjian Dong, Weiying Zhang, Junkai Ma and Xiaowei Mao
Molecules 2023, 28(9), 3700; https://doi.org/10.3390/molecules28093700 - 25 Apr 2023
Cited by 2 | Viewed by 1644
Abstract
Enantioselective labeling of important bioactive molecules in complex biological environments by artificial receptors has drawn great interest. From both the slight difference of enantiomers’ physicochemical properties and inherently complexity in living organism point of view, it is still a contemporary challenge for preparing [...] Read more.
Enantioselective labeling of important bioactive molecules in complex biological environments by artificial receptors has drawn great interest. From both the slight difference of enantiomers’ physicochemical properties and inherently complexity in living organism point of view, it is still a contemporary challenge for preparing practical chiral device that could be employed in the model animal due to diverse biological interference. Herein, we introduce γ-cyclodextrin onto graphene oxide for fabricating γ-cyclodextrin and graphene oxide assemblies, which provided an efficient nanoplatform for chiral labelling of D-phenylalanine with higher chiral discrimination ratio of KD/KL = 8.21. Significantly, the chiral fluorescence quenching effect of this γ-CD-GO nanoplatform for D-phenylalanine enantiomer in zebrafish was 7.0-fold higher than L-isomer, which exhibiting real promise for producing practical enantio-differentiating graphene-based systems in a complex biological sample. Full article
(This article belongs to the Special Issue Advances in Fluorescent Probe Technology)
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15 pages, 3198 KiB  
Article
Development of Highly Efficient Estrogen Receptor β-Targeted Near-Infrared Fluorescence Probes Triggered by Endogenous Hydrogen Peroxide for Diagnostic Imaging of Prostate Cancer
by Pei He, Xiaofei Deng, Bin Xu, Baohua Xie, Wenting Zou, Haibing Zhou and Chune Dong
Molecules 2023, 28(5), 2309; https://doi.org/10.3390/molecules28052309 - 2 Mar 2023
Cited by 3 | Viewed by 2065
Abstract
Hydrogen peroxide is one of the most important reactive oxygen species, which plays a vital role in many physiological and pathological processes. A dramatic increase in H2O2 levels is a prominent feature of cancer. Therefore, rapid and sensitive detection of [...] Read more.
Hydrogen peroxide is one of the most important reactive oxygen species, which plays a vital role in many physiological and pathological processes. A dramatic increase in H2O2 levels is a prominent feature of cancer. Therefore, rapid and sensitive detection of H2O2 in vivo is quite conducive to an early cancer diagnosis. On the other hand, the therapeutic potential of estrogen receptor beta (ERβ) has been implicated in many diseases including prostate cancer, and this target has attracted intensive attention recently. In this work, we report the development of the first H2O2-triggered ERβ-targeted near-infrared fluorescence (NIR) probe and its application in imaging of prostate cancer both in vitro and in vivo. The probe showed good ERβ selective binding affinity, excellent H2O2 responsiveness and near infrared imaging potential. Moreover, in vivo and ex vivo imaging studies indicated that the probe could selectively bind to DU-145 prostate cancer cells and rapidly visualizes H2O2 in DU-145 xenograft tumors. Mechanistic studies such as high-resolution mass spectrometry (HRMS) and density functional theory (DFT) calculations indicated that the borate ester group is vital for the H2O2 response turn-on fluorescence of the probe. Therefore, this probe might be a promising imaging tool for monitoring the H2O2 levels and early diagnosis studies in prostate cancer research. Full article
(This article belongs to the Special Issue Advances in Fluorescent Probe Technology)
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10 pages, 3532 KiB  
Article
Ratiometric Singlet Oxygen Sensor Based on BODIPY-DPA Dyad
by Alexey A. Pakhomov, Anastasia S. Belova, Arevik G. Khchoyan, Yuriy N. Kononevich, Dmitriy S. Ionov, Margarita A. Maksimova, Anastasiya Yu. Frolova, Mikhail V. Alfimov, Vladimir I. Martynov and Aziz M. Muzafarov
Molecules 2022, 27(24), 9060; https://doi.org/10.3390/molecules27249060 - 19 Dec 2022
Cited by 3 | Viewed by 2745
Abstract
Compounds sensitive to reactive oxygen species are widely used in the study of processes in living cells and in the development of therapeutic agents for photodynamic therapy. In the present work, we have synthesized a dyad in which the BODIPY dye is chemically [...] Read more.
Compounds sensitive to reactive oxygen species are widely used in the study of processes in living cells and in the development of therapeutic agents for photodynamic therapy. In the present work, we have synthesized a dyad in which the BODIPY dye is chemically bound to 9,10-diphenylanthracene (DPA). Here, DPA acts as a specific sensor of singlet oxygen and BODIPY as a reference dye. We studied the photophysical properties of the BODIPY-DPA dyad and showed that energy transfer occurs between the chromophores. As a result, the compound has excitation maxima in the absorption region of both DPA and BODIPY, but the fluorescence emission occurs mainly from BODIPY. In the presence of singlet oxygen, the excitation maximum of DPA decreases, while the intensity of the excitation maximum of BODIPY remains almost unchanged. This allows the BODIPY-DPA dyad to be used as a ratiometric sensor of singlet oxygen. Full article
(This article belongs to the Special Issue Advances in Fluorescent Probe Technology)
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Review

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27 pages, 3651 KiB  
Review
Recent Advances in Biological Applications of Aptamer-Based Fluorescent Biosensors
by Minhyuk Lee, Seonhye Shin, Sungjee Kim and Nokyoung Park
Molecules 2023, 28(21), 7327; https://doi.org/10.3390/molecules28217327 - 29 Oct 2023
Cited by 10 | Viewed by 4359
Abstract
Aptamers have been spotlighted as promising bio-recognition elements because they can be tailored to specific target molecules, bind to targets with a high affinity and specificity, and are easy to chemically synthesize and introduce functional groups to. In particular, fluorescent aptasensors are widely [...] Read more.
Aptamers have been spotlighted as promising bio-recognition elements because they can be tailored to specific target molecules, bind to targets with a high affinity and specificity, and are easy to chemically synthesize and introduce functional groups to. In particular, fluorescent aptasensors are widely used in biological applications to diagnose diseases as well as prevent diseases by detecting cancer cells, viruses, and various biomarkers including nucleic acids and proteins as well as biotoxins and bacteria from food because they have the advantages of a high sensitivity, selectivity, rapidity, a simple detection process, and a low price. We introduce screening methods for isolating aptamers with q high specificity and summarize the sequences and affinities of the aptamers in a table. This review focuses on aptamer-based fluorescence detection sensors for biological applications, from fluorescent probes to mechanisms of action and signal amplification strategies. Full article
(This article belongs to the Special Issue Advances in Fluorescent Probe Technology)
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16 pages, 9518 KiB  
Review
Two-Photon Fluorescent Probes for Amyloid-β Plaques Imaging In Vivo
by Yi Chen
Molecules 2023, 28(17), 6184; https://doi.org/10.3390/molecules28176184 - 22 Aug 2023
Cited by 3 | Viewed by 1913
Abstract
Amyloid-β (Aβ) peptide deposition, hyperphosphorylated tau proteins, reactive astrocytes, high levels of metal ions, and upregulated monoamine oxidases are considered to be the primary pathological markers of Alzheimer’s disease (AD). Among them, Aβ peptide deposition or Aβ plaques, is regarded as the initial [...] Read more.
Amyloid-β (Aβ) peptide deposition, hyperphosphorylated tau proteins, reactive astrocytes, high levels of metal ions, and upregulated monoamine oxidases are considered to be the primary pathological markers of Alzheimer’s disease (AD). Among them, Aβ peptide deposition or Aβ plaques, is regarded as the initial factor in the pathogenesis of AD and a critical pathological hallmark in AD. This review highlights recently Aβ-specific fluorescent probes for two-photon imaging of Aβ plaques in vivo. It includes the synthesis and detection mechanism of probes, as well as their application to two-photon imaging of Aβ plaques in vivo. Full article
(This article belongs to the Special Issue Advances in Fluorescent Probe Technology)
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