Integrated Photonic Digital PCR Techniques

A special issue of Micromachines (ISSN 2072-666X). This special issue belongs to the section "E:Engineering and Technology".

Deadline for manuscript submissions: closed (29 February 2024) | Viewed by 1061

Special Issue Editors


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Guest Editor
Immunotherapy Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea
Interests: MEMS; interfacial chemistry; field-effect transistor; photonic PCR; PoCT; portable devices
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Guest Editor
SKKU Advanced Institute of Nanotechnology (SAINT), Department of Nano Engineering, Sungkyunkwan University, Suwon 16419, Republic of Korea
Interests: chem/bio sensors; interfacing chemistry; nanomaterials; electronics; smart sensors
Special Issues, Collections and Topics in MDPI journals

Special Issue Information

Dear Colleagues,

PCR technology has developed over several decades and through three generations due to the utilization of various techniques. As the world has recently experienced COVID-19, PCR technology has become necessary for rapid and early diagnosis. Recently, quantitative analysis has become possible with the development of a fast molecular diagnosis and digital PCR, and the expectations of molecular diagnosis have increased as ultra-fast digital PCR technology has been developed using light energy and energy conversion technologies. Photonic digital PCR is a molecular analysis technique that enables the precise quantification and amplification of DNA or RNA molecules in a sample. This method offers exceptional sensitivity and accuracy by partitioning the sample into thousands of individual reaction volumes, each containing a limited number of target molecules. Through the utilization of advanced microfluidics and optical detection systems, photonic digital PCR allows for the absolute quantification of nucleic acids without the need for a standard curve. Accordingly, this Special Issue seeks to showcase research papers, short communications, and review articles that focus on: (1) (portable) photonic dPCR development using new technologies, (2) demonstrations using highly infectious pathogens, and (3) on-site demonstrations using portable devices.

Dr. Kyung Ho Kim
Prof. Dr. Oh-seok Kwon
Guest Editors

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Keywords

  • photonic PCR
  • energy conversion
  • molecular diagnosis
  • nanotechnology

Published Papers (1 paper)

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Research

11 pages, 6799 KiB  
Article
Photothermal-Based Multiplex Nested Digital PCR System for Rapid Detection of Foodborne Pathogens
by Junwei Li, Xinyi Liang, Jinsong Ma, Jianye Cheng, Hui Wang, Xuzhao Wang, Jie Jayne Wu and Hailong An
Micromachines 2024, 15(4), 435; https://doi.org/10.3390/mi15040435 - 25 Mar 2024
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Abstract
The rapid and sensitive detection of foodborne pathogens is crucial for ensuring food safety. Among virus testing methods, polymerase chain reaction (PCR) has served as the gold-standard technique in most food safety regulation organizations. However, to enhance the speed and efficiency of PCR, [...] Read more.
The rapid and sensitive detection of foodborne pathogens is crucial for ensuring food safety. Among virus testing methods, polymerase chain reaction (PCR) has served as the gold-standard technique in most food safety regulation organizations. However, to enhance the speed and efficiency of PCR, novel approaches are continually being explored. In this work, leveraging the photothermal effects and high thermal conductivity of gold nanoparticles, we have significantly improved the heating and cooling rates of thermal cycles, enabling ultra-fast PCR detection. Specifically, we present a pre-degassing multiplex digital PCR chip integrated with gold nanoparticles. We further developed a portable system with a light source for photothermal heating cycling, along with an optoelectronic sensor to analyze PCR amplification products after rapid thermal cycling. As proof of concept, the proposed chip and portable device was applied for the on-site detection of several types of foodborne pathogens, including Escherichia coli, Listeria monocytogenes, Staphylococcus aureus, and Salmonella. The whole system could distinguish those pathogens within 20 min, showing good potential for the rapid detection of multiple types of foodborne pathogens. Full article
(This article belongs to the Special Issue Integrated Photonic Digital PCR Techniques)
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