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Volume 14
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Animals, Volume 14, Issue 22 (November-2 2024) – 51 articles

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17 pages, 288 KiB  
Article
Inbreeding Depression and Purging in Fertility and Longevity Traits in Sheep Breeds from Germany
by Cathrin Justinski, Jens Wilkens and Ottmar Distl
Animals 2024, 14(22), 3214; https://doi.org/10.3390/ani14223214 - 8 Nov 2024
Abstract
In the present study, we analysed fertility and longevity traits of 22 sheep breeds from Germany with a suitable quantity of data in the national database OviCap. The data comprised merino, meat, country and milk sheep breeds with 62,198 ewes and about 173,000 [...] Read more.
In the present study, we analysed fertility and longevity traits of 22 sheep breeds from Germany with a suitable quantity of data in the national database OviCap. The data comprised merino, meat, country and milk sheep breeds with 62,198 ewes and about 173,000 lambing records, until the fifth lambing. Across-breed means of heritabilities reached estimates of 0.13, 0.17 and 0.18 for number of lambings, average number of lambs born per lambing and number of lambs per lifetime, respectively. For age at first lambing, length of lifetime and productive life, mean heritabilities over breeds were 0.34, 0.17 and 0.32, respectively. The across-breed means of the individual rate of inbreeding were significantly negative for the average number of lambs born per lambing and number of lambs born per lifetime, and for number of lambings it was close to the significance threshold. We found declining slopes for inbreeding depression for the average number of lambs born per lambing and number of lambs born per lifetime in 16 breeds, and significantly negative slopes in five and seven breeds. For lifetime and productive life, 9/22 and 8/22 breeds showed significant inbreeding depression, while for age at first lambing, only 1/22 breeds showed significant inbreeding depression. A significant reduction in inbreeding depression due to purging effects was found for eight breeds. Fitness traits may be subject to forced directional selection. Therefore, sheep breeding programmes should give special consideration to fertility and longevity traits. Fitness related traits seem to be essential in conservation of genetic diversity within sheep breeds. Full article
(This article belongs to the Special Issue Genetics and Genomics of Small Ruminants Prolificacy)
16 pages, 5387 KiB  
Article
Heat Stress Impairs Endometrial Function During Implantation by Regulating Autophagy in Hainan Black Goat
by Xiaoping Li, Yanyu Sun, Yi Min, Xinyu Wang, Diqi Yang and Hui Peng
Animals 2024, 14(22), 3213; https://doi.org/10.3390/ani14223213 (registering DOI) - 8 Nov 2024
Abstract
Heat stress (HS) is a significant factor that adversely affects the health, welfare, and productivity of domestic animals, particularly impacting embryo implantation rates. However, the effects of HS on endometrial function during the peri-implantation period in Hainan black goats remain unclear. This study [...] Read more.
Heat stress (HS) is a significant factor that adversely affects the health, welfare, and productivity of domestic animals, particularly impacting embryo implantation rates. However, the effects of HS on endometrial function during the peri-implantation period in Hainan black goats remain unclear. This study explores the influence of HS on the endometrium of these goats. We collected uterine tissue samples from both control and heat-stressed goats and performed in vitro experiments using a 2 × 2 factorial design. This design included two temperature conditions (37 °C as the control and 42 °C to simulate heat stress) and two pharmacological treatments: chloroquine (CQ), an autophagy inhibitor, and rapamycin (RAPA), an autophagy activator. Our results showed that heat stress initially suppresses autophagy activity, which is subsequently enhanced with prolonged exposure. The pharmacologic modulation of autophagy, through activation or inhibition, resulted in corresponding upregulation or downregulation of the endometrial epithelial cells’ (EECs) receptivity markers. The overexpression of ATG7 partially reversed the HS-induced downregulation of these markers. Additionally, TJP1, a tight-junction marker, was degraded under the pharmacologic and genetic activation of autophagy in HS conditions but accumulated more in the EECs pre-treated with CQ. These findings suggest that autophagy plays a protective role in maintaining endometrial function under HS conditions in Hainan black goats. This study offers valuable insights into the role of autophagy in endometrial receptivity and proposes a potential strategy to mitigate the adverse effects of HS on goat reproduction. Full article
(This article belongs to the Section Animal Reproduction)
15 pages, 1126 KiB  
Article
Genome-Wide Selection Signals Reveal Candidate Genes Associated with Plateau Adaptation in Tibetan Sheep
by Yufang Song, Chao Yuan, Xuejiao An, Tingting Guo, Wentao Zhang, Zengkui Lu and Jianbin Liu
Animals 2024, 14(22), 3212; https://doi.org/10.3390/ani14223212 (registering DOI) - 8 Nov 2024
Abstract
Tibetan sheep have developed unique adaptations for survival in the Qinghai–Tibet Plateau environment. However, the functional genes and molecular mechanisms that regulate hypoxia adaptation have not been fully characterized. In this study, based on the whole-genome resequencing data for Tibetan sheep at different [...] Read more.
Tibetan sheep have developed unique adaptations for survival in the Qinghai–Tibet Plateau environment. However, the functional genes and molecular mechanisms that regulate hypoxia adaptation have not been fully characterized. In this study, based on the whole-genome resequencing data for Tibetan sheep at different altitudes, the population differentiation index (FST) and nucleotide diversity ratio (θπ ratio) were evaluated in populations of 20 Oula sheep (3501 m altitude, OL), 20 Zashijia sheep (4369 m altitude, ZSJ), and 20 Awang sheep (4643 m altitude, AW) to reveal candidate loci related to high-altitude hypoxia. We screened 728 and 524 candidate genes in the AW vs. OL and ZSJ vs. OL groups, respectively, of which 134 genes were jointly screened. Candidate genes were mainly enriched in the Ras, melanoma, melanogenesis, VEGF, and PPAR signaling pathways. HIF1AN, PDGFA, PDGFD, ANXA2, SOCS2, NOXA1, WNT7B, MMP14, GNG2, ATF6, PGAM2, PPP3R1, GSTCD, and PPARA may play important roles in the high-altitude adaptation of Tibetan sheep. In conclusion, this study provides valuable insights into the genes and molecular mechanisms that underlie high-altitude hypoxia adaptation in Tibetan sheep. Full article
(This article belongs to the Section Small Ruminants)
20 pages, 25566 KiB  
Article
Reassortants of the Highly Pathogenic Influenza Virus A/H5N1 Causing Mass Swan Mortality in Kazakhstan from 2023 to 2024
by Kulyaisan T. Sultankulova, Takhmina U. Argimbayeva, Nurdos A. Aubakir, Arailym Bopi, Zamira D. Omarova, Aibarys M. Melisbek, Kobey Karamendin, Aidyn Kydyrmanov, Olga V. Chervyakova, Aslan A. Kerimbayev, Yerbol D. Burashev, Yermukhanmet T. Kasymbekov and Mukhit B. Orynbayev
Animals 2024, 14(22), 3211; https://doi.org/10.3390/ani14223211 (registering DOI) - 8 Nov 2024
Abstract
In the winter of 2023/2024, the mass death of swans was observed on Lake Karakol on the eastern coast of the Caspian Sea. From 21 December 2023 to 25 January 2024, 1132 swan corpses (Cygnus olor, Cygnus cygnus) were collected [...] Read more.
In the winter of 2023/2024, the mass death of swans was observed on Lake Karakol on the eastern coast of the Caspian Sea. From 21 December 2023 to 25 January 2024, 1132 swan corpses (Cygnus olor, Cygnus cygnus) were collected and disposed of on the coast by veterinary services and ecologists. Biological samples were collected from 18 birds for analysis at different dates of the epizootic. It was found that the influenza outbreak was associated with a high concentration of migrating birds at Lake Karakol as a result of a sharp cold snap in the northern regions. At different dates of the epizootic, three avian influenza A/H5N1 viruses of clade 2.3.4.4.b were isolated from dead birds and identified as highly pathogenic viruses (HPAIs) based on the amino acid sequence of the hemagglutinin multi-base proteolytic cleavage site (PLREKRRRKR/G). A phylogenetic analysis showed that the viruses isolated from the swans had reassortations in the PB2, PB1, and NP genes between highly pathogenic (HP) and low-pathogenic (LP) avian influenza viruses. Avian influenza viruses A/Cygnus cygnus/Karakol lake/01/2024(H5N1) and A/Mute swan/Karakol lake/02/2024(H5N1) isolated on 10 January 2024 received PB2, PB1, and NP from LPAIV, while A/Mute swan/Mangystau/9809/2023(H5N1) isolated on 26 December 2023 received PB1 and NP from LPAIV, indicating that the H5N1 viruses in this study are new reassortants. All viruses showed amino acid substitutions in the PB2, PB1, NP, and NS1 segments, which are critical for enhanced virulence or adaptation in mammals. An analysis of the genomes of the isolated viruses showed that bird deaths during different periods of the epizootic were caused by different reassortant viruses. Kazakhstan is located at the crossroads of several migratory routes of migratory birds, and the possible participation of wild birds in the introduction of various pathogens into the regions of Kazakhstan requires further study. Full article
(This article belongs to the Special Issue Interdisciplinary Perspectives on Wildlife Disease Ecology)
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11 pages, 323 KiB  
Article
Bioavailable Selenium Concentration and Bioavailability in Tissues of Beef Cattle
by Marta Juszczak-Czasnojć, Małgorzata Bąkowska, Dariusz Gączarzewicz, Bogumiła Pilarczyk and Agnieszka Tomza-Marciniak
Animals 2024, 14(22), 3210; https://doi.org/10.3390/ani14223210 (registering DOI) - 8 Nov 2024
Abstract
The aim of the study was to compare the levels of bioavailable Se between different organs in beef cattle with regard to selenium status. The animals were divided into two groups based on serum selenium concentration, viz. normal and deficient Se status. Bioavailable [...] Read more.
The aim of the study was to compare the levels of bioavailable Se between different organs in beef cattle with regard to selenium status. The animals were divided into two groups based on serum selenium concentration, viz. normal and deficient Se status. Bioavailable selenium was extracted from the organs by simulated in vitro digestion, and its concentration was determined by spectrofluorimetry. The percentage of bioavailable Se was calculated in the liver, kidney, lung, spleen, heart, and longissimus dorsi muscle, based on the total Se content. In all animals tested, the highest bioavailable selenium concentrations were found in the kidney (0.175–0.408 µg/g) and the lowest in the longissimus dorsi muscle (0.04–0.042 µg/g), regardless of Se status. The highest bioavailability of Se was recorded in bulls, reaching 56.6% in the longissimus dorsi muscle, and the lowest in the kidney (21.4%). The study showed that cattle with Se deficiency had a higher percentage of bioavailable Se in their tissues than those with normal Se levels. This is most likely related to the fact that the body seeks to ensure optimal levels of the element in the organs during insufficient supply. Despite balanced feeding, there was a deficiency of Se. This is most likely related to the fact that, in plants, it occurs mainly in its inorganic form, which is less well-utilised by the animals and does not cover their needs for this element. Full article
(This article belongs to the Special Issue Beef Cattle Feedlot: Nutrition, Production and Management)
16 pages, 271 KiB  
Article
Utilization of Purple Napier Grass Silage on Milk Quality and Blood Antioxidant Activity in Lactating Dairy Goats
by Weerada Meethip, Siwaporn Paengkoum, Narawich Onjai-uea, Sorasak Thongpea, Nittaya Taethaisong, Jariya Surakhunthod and Pramote Paengkoum
Animals 2024, 14(22), 3209; https://doi.org/10.3390/ani14223209 (registering DOI) - 8 Nov 2024
Abstract
In this study, our subjects were 18 female crossbred Saanen lactating goats; the goats weighed approximately 43.25 ± 2.35 kg and had been producing milk for 14 ± 2 days. They were assigned to three equally sized experimental groups based on the cycle [...] Read more.
In this study, our subjects were 18 female crossbred Saanen lactating goats; the goats weighed approximately 43.25 ± 2.35 kg and had been producing milk for 14 ± 2 days. They were assigned to three equally sized experimental groups based on the cycle of the lactation period. In accordance with the randomized complete block design (RCBD), six animals were randomly assigned to the treatments in each block. There were three treatments: (1) control = Napier Pakchong-1 grass silage (NPS); (2) = sweet grass silage (SGS); and (3) = purple Napier silage (PNS). Our findings show that the goats fed with purple Napier grass silage had a higher DM intake (1805.97 g/day) than those that underwent a different treatment (1312.76 and 1443.43 g/day). The goats fed with purple Napier grass silage had higher protein digestibility (79.85) than those fed with Napier Pakchong-1 and sweet grass silage. There were significant differences in the ruminal ammonia nitrogen and blood urea nitrogen. Nevertheless, purple Napier grass silage significantly increased butyric acid 2 and 4 h after feeding and increased the number of microorganisms. In the dairy goats fed purple Napier grass silage, we observed a reduction in protozoa and methanogen populations. The levels of antioxidants shown by the plasma indices differed in the goats fed with purple Napier grass silage and showed enhanced milk composition, higher levels of total antioxidants, superoxide dismutase and glutathione peroxidase in the plasma, reduced protozoa methanogen, and a decreased level of malondialdehyde in the plasma. This study highlights that purple Napier grass silage has the potential to be a beneficial source of roughage for lactating dairy goats. Full article
(This article belongs to the Special Issue Sustainable Management of Ruminants: Feed Utilization, Nitrogen Dynamics, Physiology, and Metabolism)
16 pages, 1927 KiB  
Article
Dietary Malondialdehyde Impair Intestinal Health and Fillet Quality of Hybrid Grouper (Epinephelus fuscoguttatus♀ × E. lanceolatus♂)
by Xuehan Wang, Jiongting Fan, Xiaohui Dong, Shuang Zhang, Qihui Yang, Shuyan Chi, Haitao Zhang, Junming Deng and Beiping Tan
Animals 2024, 14(22), 3208; https://doi.org/10.3390/ani14223208 (registering DOI) - 8 Nov 2024
Abstract
Aquafeed kept at elevated temperatures and humidity can result in malondialdehyde (MDA) formation, adversely affecting aquafeed quality and triggering negative reactions in fish. To investigate the detrimental effects of dietary MDA on fish, six experimental diets with varying MDA levels (ranging from 0.03 [...] Read more.
Aquafeed kept at elevated temperatures and humidity can result in malondialdehyde (MDA) formation, adversely affecting aquafeed quality and triggering negative reactions in fish. To investigate the detrimental effects of dietary MDA on fish, six experimental diets with varying MDA levels (ranging from 0.03 to 17.72 mg/kg, on dietary crude lipid basis) were administered to three replicates of hybrid grouper for 8 weeks. Dietary inclusion of 4.43 mg/kg MDA significantly decreased serum complement 4 content and lysozyme activity, along with intestinal complement 3, complement 4, and immunoglobulin M contents. Furthermore, dietary inclusion of 8.86 mg/kg MDA significantly increased the activities of interleukin-1 receptor-associated kinase, ubiquitin-protein ligase, p38 mitogen-activated protein kinase, and tumor necrosis factor-α, downregulated the relative expression of Occludin but upregulated the relative expression of HSP70 in the hindgut. Additionally, the highest inclusion of MDA (17.72 mg/kg) significantly upregulated the relative levels of pro-inflammatory cytokines (IL-1β and TNF-α), caused intestinal inflammation, and damaged the intestinal microbial structure and fish fillet texture. This study demonstrated a dose-dependent response of MDA on hybrid grouper. A low dietary dose of MDA (<2.21 mg/kg) exhibited minimal impact on immune response and fillet quality. However, higher inclusion levels (≥4.43 mg/kg) impaired the intestinal health and fillet quality. Consequently, the safety limit for MDA content in the diet for hybrid grouper has been established at 4.43 mg/kg based on dietary crude lipid basis. Full article
(This article belongs to the Special Issue Advances in Aquaculture Nutrition for Sustainable Health Management)
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28 pages, 3268 KiB  
Article
Anthropic Pressure on Cetaceans Stranded Along the Ligurian Coast Within the Pelagos Sanctuary: A Case Series
by Virginia Mattioda, Federica Giorda, Guia Consales, Camilla Testori, Simona Zoppi, Maria Goria, Maria Ines Crescio, Laura Serracca, Katia Varello, Valerio Carta, Letizia Marsili, Matteo Baini, Matteo Galli, Cristina Cristina Fossi, Elena Fontanesi, Fulvio Garibaldi, Guido Pietroluongo, Sandro Mazzariol, Francesco Brunelli, Cristina Casalone and Carla Grattarolaadd Show full author list remove Hide full author list
Animals 2024, 14(22), 3207; https://doi.org/10.3390/ani14223207 - 8 Nov 2024
Abstract
Data collected by C. Re. Di. Ma over a 3-year period (2020–2022) were considered to assess anthropic pressure on cetaceans living in the Ligurian sea. Out of a total of 37 stranded cetaceans, a complete post mortem examination was performed on 23 cases. [...] Read more.
Data collected by C. Re. Di. Ma over a 3-year period (2020–2022) were considered to assess anthropic pressure on cetaceans living in the Ligurian sea. Out of a total of 37 stranded cetaceans, a complete post mortem examination was performed on 23 cases. Of these, 14 were further selected considering at least one of these conditions: (i) confirmed, probable, or suspected interaction with fishing activities through the application of a standardized diagnostic framework (7/14; 50%), (ii) toxicological stress through the evaluation of OCs hazardous levels (14/14; 100%), and (iii) terrestrial pathogen-associated disease (systemic infection and/or associated lesions) (7/14; 50%). For 9 animals out of a total of 14 selected, the cause of death was classified as natural (6/14; 42,8%), anthropic (3/14; 21,4%), or not determined (5/14; 35,7%) based on gross and histological pathology and ancillary testing. These findings extend our knowledge of the anthropic pressure to which cetaceans stranded along the Ligurian coastline are subjected from a multidisciplinary point of view. Full article
(This article belongs to the Section Ecology and Conservation)
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9 pages, 1876 KiB  
Article
Hair and Blood Trace Elements (Cadmium, Zinc, Chrome, Lead, Iron and Copper) Biomonitoring in the Athletic Horse: The Potential Role of Haematological Parameters as Biomarkers
by Francesca Aragona, Claudia Giannetto, Giuseppe Piccione, Patrizia Licata, Ömer Deniz and Francesco Fazio
Animals 2024, 14(22), 3206; https://doi.org/10.3390/ani14223206 - 8 Nov 2024
Abstract
The aim of the present study was the evaluation of the bioaccumulation of cadmium (Cd), Zinc (Zn), Chrome (Cr), Lead (Pb), Iron (Fe) and Copper (Cu), in the blood, serum, tail and mane of horses from the industrialized area of Milazzo (Messina, Sicily), [...] Read more.
The aim of the present study was the evaluation of the bioaccumulation of cadmium (Cd), Zinc (Zn), Chrome (Cr), Lead (Pb), Iron (Fe) and Copper (Cu), in the blood, serum, tail and mane of horses from the industrialized area of Milazzo (Messina, Sicily), to understand the relationships between haematological parameters: Red Blood Cells (RBCs), White Blood Cells (WBCs), Haemoglobin (Hb), Haematocrit (Hct), Mean Corpuscular Volume (MCV), Mean Corpuscular Haemoglobin (MCH), Mean Corpuscular Haemoglobin Concentration (MCHC), Platelets (PLTs) and the concentrations of trace elements. Blood and hair samples from 20 healthy Italian Saddle horses and water, hay and concentrates samples were obtained to determine the haemogram and mineral concentration using a Thermo Scientific iCAP-Q ICP-MS spectrometer. Descriptive analysis showed a higher concentration of Zn, Cr, Pb, Fe, and Cu in the blood and a higher concentration of Cd in the tail than other substrates. A positive correlation was found for Cr (p < 0.0001) and Zn (p < 0.01) between blood and serum substrates, for Zn (p < 0.001) between mane and tail and for Pb (p < 0.01) between blood and mane, while a negative correlation was observed for Cr (p < 0.01) between blood and tail. Results showed a close relationship between the bioaccumulation of certain trace elements in biological substrates and haematological parameters, which represent useful biomarkers suggesting further studies, given the role of haematological parameters in athletic horses. Full article
(This article belongs to the Section Equids)
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16 pages, 3186 KiB  
Article
Trends in Urban Wild Meat Trade of Chelonians (Turtles and Tortoises) in the Peruvian Amazon
by Pedro Mayor, Richard Bodmer, Kelly Moya, Samantha Solis, Maire Kirkland, Pedro Perez-Peña, Tula Fang and Martí Orta-Martínez
Animals 2024, 14(22), 3205; https://doi.org/10.3390/ani14223205 - 8 Nov 2024
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Abstract
Culturally, chelonians are important sources of nutrition and income for rural and urban people in tropical rainforests, but urban trade can cause declines in wild populations. This study analyses the urban chelonian trade and its trends to better understand the impact on free-living [...] Read more.
Culturally, chelonians are important sources of nutrition and income for rural and urban people in tropical rainforests, but urban trade can cause declines in wild populations. This study analyses the urban chelonian trade and its trends to better understand the impact on free-living populations in the Northern Peruvian Amazon. We studied the urban trade of wild chelonians by conducting 526 days of participant observation and structured questionnaires with the main chelonian vendors in the wet markets of Iquitos between 2006 and 2018. The trade of chelonians decreased by −161.6%, from 22,694 individuals in 2006/07 to 8657 individuals in 2017/18. Chelonoidis denticulatus was the species sold the most (86.3%), followed by Podocnemis unifilis (13.6%). Podocnemis expansa was only sold in 2006/07. River turtle sales increased in the dry season, while sales of Chelonoidis denticulatus decreased. Turtles were the most expensive meat sold in urban markets: 49.7% more expensive than the most frequently consumed fish, Prochilodus nigricans, and 48.4% more expensive than poultry. Turtles represented only 0.19% (SD 0.23) of the index of domestic meat and fish consumption per capita. River turtle eggs are sold by a different set of vendors, and in 2017/18, 570,229 eggs were traded in the market of Belén in Iquitos, equivalent to an approximate lay of 10,418 P. unifilis and 1178 P. expansa females. The high magnitude of the trade of river turtle eggs together with the reduction in their meat trade suggests a prioritization of egg sales, which should improve the conservation of adults, since meat sales can be detrimental to chelonian populations. Full article
(This article belongs to the Section Wildlife)
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15 pages, 2093 KiB  
Article
Comparative Transcriptome Analysis Reveals the Impact of a High-Fat Diet on Hepatic Metabolic Function in Tilapia (Oreochromis niloticus)
by Rui Jia, Yiran Hou, Linjun Zhou, Liqiang Zhang, Bing Li and Jian Zhu
Animals 2024, 14(22), 3204; https://doi.org/10.3390/ani14223204 - 8 Nov 2024
Viewed by 92
Abstract
Hepatic steatosis is prevalent among cultured fish, yet the molecular mechanisms remain incompletely understood. This study aimed to assess changes in hepatic metabolic function in tilapia and to explore the underlying molecular mechanisms through transcriptomic analyses. Tilapia were allocated into two groups: a [...] Read more.
Hepatic steatosis is prevalent among cultured fish, yet the molecular mechanisms remain incompletely understood. This study aimed to assess changes in hepatic metabolic function in tilapia and to explore the underlying molecular mechanisms through transcriptomic analyses. Tilapia were allocated into two groups: a normal control (Ctr)-fed group and a high-fat diet (HFD)-fed group. Serum biochemical analyses revealed that HFD feeding led to liver damage and lipid accumulation, characterized by elevated levels of glutamic-pyruvic transaminase (GPT), glutamic-oxaloacetic transaminase (GOT), triglycerides (TGs), and total cholesterol (TC). Transcriptome analysis showed that 538 genes were significantly downregulated, and 460 genes were significantly upregulated in the HFD-fed fish. Gene Ontology (GO) enrichment analysis showed that these differentially expressed genes (DEGs) were apparently involved in the lipid metabolic process and monocarboxylic acid metabolic process. Meanwhile, Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis indicated significant alterations in pathways of steroid biosynthesis, porphyrin metabolism, terpenoid backbone biosynthesis, and retinol metabolism after HFD feeding. Additionally, results from Gene Set Enrichment Analysis (GSEA) revealed that gene expression patterns in pathways including oxidative phosphorylation, protein export, protein processing in the endoplasmic reticulum, and ribosome biogenesis were positively enriched in the HFD-fed tilapia. These findings provide novel insights into the mechanisms underlying HFD-induced hepatic dysfunction in fish, contributing to the optimization of feeding strategies in aquaculture. Full article
(This article belongs to the Special Issue Research Progress in Growth, Health and Metabolism of Fishes)
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10 pages, 1115 KiB  
Article
Is Butyrate Concentration in the Equine Gastrointestinal Tract Altered During and After Surgery for Treatment of Large Colon Obstruction?
by Charlotte K. Barton, Diana M. Hassel, Kelly Anders and Tiffany L. Weir
Animals 2024, 14(22), 3203; https://doi.org/10.3390/ani14223203 - 8 Nov 2024
Viewed by 89
Abstract
A major cause of morbidity and mortality in horses with large colon obstructive lesions is injury to the colonic mucosal barrier from ischemic injury. Since butyrate has been shown to play a critical role in the maintenance of a healthy mucosal barrier, it [...] Read more.
A major cause of morbidity and mortality in horses with large colon obstructive lesions is injury to the colonic mucosal barrier from ischemic injury. Since butyrate has been shown to play a critical role in the maintenance of a healthy mucosal barrier, it may play a role in the recovery process. This study’s objective was to determine whether the differences in butyrate concentrations existed between horses with surgical large colon obstructive lesions and healthy horses both during and after surgery. Eleven horses presenting with surgical colic lesions were enrolled; colonic samples were acquired during surgery, and fecal samples were obtained 36 h later. Colonic and fecal samples were also obtained from control groups. Samples were analyzed for butyrate, acetate, and propionate concentrations. There was no significant difference in butyrate content between surgical colonic or fecal samples and controls; however, an alteration in the proportion of SCFAs in relation to one another was noted. These changes in the individual SCFA levels were not statistically significant. The study findings demonstrated that there were no significant differences in butyrate proportions when comparing samples from horses with surgical colic lesions to healthy control horses. Full article
(This article belongs to the Section Equids)
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18 pages, 5532 KiB  
Article
Antibacterial and Antibiofilm Activity of Essential Oils Against Aeromonas spp. Isolated from Rainbow Trout
by Patrícia Hudecová, Jana Koščová, Vanda Hajdučková, Ján Király and Peter Horňak
Animals 2024, 14(22), 3202; https://doi.org/10.3390/ani14223202 - 8 Nov 2024
Viewed by 87
Abstract
Aeromonas spp. is a major pathogen in aquaculture with a great negative economic impact. Essential oils (EOs) are compounds of the secondary metabolism of plants known for their antibacterial and antibiofilm activities. In this study, in vitro antibacterial activity of eight EOs: tea [...] Read more.
Aeromonas spp. is a major pathogen in aquaculture with a great negative economic impact. Essential oils (EOs) are compounds of the secondary metabolism of plants known for their antibacterial and antibiofilm activities. In this study, in vitro antibacterial activity of eight EOs: tea tree (extracted from Melaleuca alternifolia), eucalyptus (extracted from Eucalyptus globulus LABILL.), knee timber (extracted from Pini mungo L.), peppermint (extracted from Mentha piperita L.), oregano (extracted from Origanum vulgare L.), rosemary (extracted from Rosmarinus officinalis L.), thyme (extracted from Thymus vulgaris L.) and pine EO (extracted from Pinus silvestris L.), obtained from Calendula a.s., was evaluated. Their antibacterial activity was demonstrated against Aeromonas spp. isolates. Oregano and thyme EOs showed the strongest activity against all tested isolates at low concentrations, followed by tea tree and peppermint EOs. The MIC value ranged from 0.06 µL/mL to 1.0 µL/mL. The tested EOs showed a significant antibiofilm activity against biofilm-forming isolates with MBIC50 ranging from 0.015 µL/mL to 0.25 µL/mL. All tested isolates were obtained from rainbow trout free of clinical signs of infection. Twelve isolates of Aeromonas salmonicida subsp. masoucida, four Aeromonas hydrophila, and four isolates of Aeromonas veronii were identified. The results of the in vitro study showed a significant effect of EOs against Aeromonas spp., which confirmed their potential for use in aquaculture as a prevention against bacterial diseases and a way of reducing the use of antibiotics. Full article
(This article belongs to the Special Issue Optimizing Farm-Raised Fish Production: Nutritional Requirements, Precision Feed Formulations, Sustainable Feeding Strategies, and Health and Welfare)
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12 pages, 911 KiB  
Article
Sales of Veterinary Antibiotics in Serbia: Identification of Problem Areas Using Standardized Metrics
by Ana Tomas, Nebojša Pavlović, Saša Vukmirović, Zorana Kovačević, Tihomir Dugandžija, Dragana Radovanović and Nebojša Stilinović
Animals 2024, 14(22), 3201; https://doi.org/10.3390/ani14223201 - 8 Nov 2024
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Abstract
One Health, as a multi-disciplinary approach, considers animal, human, and environmental health. Serbia continuously records high rates of antimicrobial resistance, with a knowledge gap on practices regarding veterinary antibiotic use, as no standardized data regarding veterinary consumption of antibiotics that would allow for [...] Read more.
One Health, as a multi-disciplinary approach, considers animal, human, and environmental health. Serbia continuously records high rates of antimicrobial resistance, with a knowledge gap on practices regarding veterinary antibiotic use, as no standardized data regarding veterinary consumption of antibiotics that would allow for temporal or spatial comparison are available in Serbia. This study aimed to describe the sales of veterinary antibiotics in Serbia. Aggregated wholesale data on veterinary drug sales were retrieved from the annual reports available from the Medicines and Medical Devices Agency of the Republic of Serbia for a period between 2017 and 2020. Veterinary use was analyzed using standard European Medicines Agency proposed methodology and expressed in milligrams of active substance per population correction unit (mg/PCU). Overall, there has been a 13% increase in aggregated sales, in mg/PCU, of antibiotic veterinary medicinal products (VMPs) for food-producing animals in Serbia between 2017 and 2020. With sales of around 110 mg/PCU in 2020, Serbia would have ranked ninth in Europe. In 2020, the overall highest-selling antibiotic classes were penicillins (27.62 mg/PCU), tetracyclines (27.54 mg/PCU), and aminoglycosides (12.8 mg/PCU), accounting for 61.9% of the total sales of antibiotic VMPs for food-producing animals, in mg/PCU. An increase in the use of macrolides and lincosamides and a decrease in the use of penicillins and the group classified as “other antibacterials” was noted. The current study identified an increase in the sales of veterinary antibiotics in Serbia and pointed out several potential problem areas. Full article
(This article belongs to the Special Issue Antimicrobial Usage Monitoring Systems and Stewardship of Antimicrobials in Animal Health: Second Edition)
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14 pages, 1555 KiB  
Article
Development of Microsatellite Markers from Transcriptome of Eriocheir sinensis and Their Application in Multiplex PCR Panels
by Qizhen Xiao, Meijun Tang, Qingqing Li, Pengsheng Dong, Yongxu Cheng, Deng Deng and Xugan Wu
Animals 2024, 14(22), 3200; https://doi.org/10.3390/ani14223200 - 8 Nov 2024
Viewed by 247
Abstract
Background: The development of genetic markers is crucial for aquaculture and population genetics. Polyallelic microsatellite markers are widely used for breeding and family management of Eriocheir sinensis (E. sinensis), contributing to the sustainable development of the industry. Methods: Through transcriptome analysis, [...] Read more.
Background: The development of genetic markers is crucial for aquaculture and population genetics. Polyallelic microsatellite markers are widely used for breeding and family management of Eriocheir sinensis (E. sinensis), contributing to the sustainable development of the industry. Methods: Through transcriptome analysis, 100 highly polymorphic SSR markers were identified and developed. From these, four multiplex PCR panels, each containing 16 markers, were constructed and applied to parentage assignment in six E. sinensis families. Results: The number of alleles (Na) ranged from 7 to 21, the observed heterozygosity (Ho) varied from 0.356 to 0.951, and the expected heterozygosity (He) varied from 0.656 to 0.909. The polymorphism information content (PIC) ranged from 0.633 to 0.900. The CERVUS analysis showed that using only the two most informative multiplex PCR panels, assignment success rates exceeded 90.34%, with 100% accuracy in assigning offspring to parents when three or four panels were used. Conclusions: This method significantly enhances the efficiency of microsatellite marker analysis, which provides a convenient and cost-effective method for breeding programs and family management of E. sinensis. Full article
(This article belongs to the Section Aquatic Animals)
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19 pages, 2588 KiB  
Article
Artificial Light at Night Advances the Onset of Vocal Activity in Both Male and Female Great Tits During the Breeding Season, While Noise Pollution Has Less Impact and Only in Females
by Kim Foppen, Rianne Pinxten, Marjolein Meijdam and Marcel Eens
Animals 2024, 14(22), 3199; https://doi.org/10.3390/ani14223199 - 7 Nov 2024
Viewed by 216
Abstract
Artificial light at night (ALAN) and noise pollution are two important stressors associated with urbanisation that can have a profound impact on animal behaviour and physiology, potentially disrupting biological rhythms. Although the influence of ALAN and noise pollution on daily activity patterns of [...] Read more.
Artificial light at night (ALAN) and noise pollution are two important stressors associated with urbanisation that can have a profound impact on animal behaviour and physiology, potentially disrupting biological rhythms. Although the influence of ALAN and noise pollution on daily activity patterns of songbirds has been clearly demonstrated, studies often focus on males, and the few that examined females have not included the potential influence of males on female activity patterns. Using free-living pairs of great tits (Parus major) as a model, we examined for the first time the effects of ALAN and noise pollution and their interaction on the onset of (vocal) activity in both members of a pair. We focused on the egg-laying phase, when both sexes are most vocally active. The onset of male dawn song, female emergence time from the nest box and the onset of female calling in the nest box were measured and used as a proxy for the chronotype. The repeatabilities for all chronotype proxies were high, with higher repeatabilities for males. Consistent with previous studies, ALAN advanced the onset of male dawn song, while it did not elicit a strong response in female emergence time. Additionally, our results suggest an indirect effect of ALAN on the onset of female vocal activity via acoustic interaction with the male. Noise pollution advanced the emergence time in females, while an interaction between ALAN and noise pollution was found for the onset of female calling. In agreement with previous studies, several covariables were shown to have an influence on the activity onset. Taking several proxies for chronotype into account, this study has provided robust evidence of effects of ALAN on male and female cavity-nesting songbirds during the egg-laying period. Full article
(This article belongs to the Section Birds)
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14 pages, 601 KiB  
Article
Innovation and Utilization of Functional Feed Additives from Maize By-Products in Broiler Chickens
by Orranee Srinual, Chanidapha Kanmanee, Phatchari Srinual, Thanongsak Chaiyaso, Mongkol Yachai, Tanya Tapingkae and Wanaporn Tapingkae
Animals 2024, 14(22), 3198; https://doi.org/10.3390/ani14223198 - 7 Nov 2024
Viewed by 255
Abstract
Supplementation with spent mushroom substrate (SMS) as an exogenous enzyme in broiler diets represents a promising nutritional strategy to enhance production efficiency and reduce costs. To assess the effects of SMS enzyme products on various parameters, including growth performance, blood chemistry, carcass and [...] Read more.
Supplementation with spent mushroom substrate (SMS) as an exogenous enzyme in broiler diets represents a promising nutritional strategy to enhance production efficiency and reduce costs. To assess the effects of SMS enzyme products on various parameters, including growth performance, blood chemistry, carcass and meat quality, and gut health, a study was conducted with one-day-old broilers (n = 500). The broilers were separated into five groups: a control diet (CON) and an antibiotic group (AGP) which were added to the diet at 0.25 g kg−1, and SMS from Flammulina velutipes supplementation groups which were added to the diet at 0.5 g kg−1 (SMS0.5), 1.0 g kg−1 (SMS1.0), and 2.0 g kg−1 (SMS2.0). Final body weight and average daily gain in broilers which were fed the AGP diet were higher than in broilers which were fed the CON, SMS0.5, and SMS1.0 diets. Broilers in the CON group had a decreased average daily feed intake compared to other groups. The addition of AGP and SMS2.0 diets improved the feed conversion ratio and reduced the feed cost per gain in broilers. Broilers that were fed the CON diet had the highest serum cholesterol, while the AGP diet increased triglyceride. Dietary supplementation of SMS improved some carcass characteristics and ceacum microbial content in broilers, especially with the SMS2.0 diet. Broiler fed CON and SMS0.5 worsened the villus height/crypt depth ratio of duodenum histology. In conclusion, SMS supplementation at 1.0 and 2.0 g kg−1 can improve productive performance and health in broiler diets; however, SMS2.0 had the best efficiency. Full article
(This article belongs to the Collection Use of Agricultural By-Products in Animal Feeding)
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25 pages, 12684 KiB  
Article
Research on Behavior Recognition and Online Monitoring System for Liaoning Cashmere Goats Based on Deep Learning
by Geng Chen, Zhiyu Yuan, Xinhui Luo, Jinxin Liang and Chunxin Wang
Animals 2024, 14(22), 3197; https://doi.org/10.3390/ani14223197 - 7 Nov 2024
Viewed by 331
Abstract
Liaoning Cashmere Goats are a high-quality dual-purpose breed valued for both their cashmere and meat. They are also a key national genetic resource for the protection of livestock and poultry in China, with their intensive farming model currently taking shape. Leveraging new productivity [...] Read more.
Liaoning Cashmere Goats are a high-quality dual-purpose breed valued for both their cashmere and meat. They are also a key national genetic resource for the protection of livestock and poultry in China, with their intensive farming model currently taking shape. Leveraging new productivity advantages and reducing labor costs are urgent issues for intensive breeding. Recognizing goatbehavior in large-scale intelligent breeding not only improves health monitoring and saves labor, but also improves welfare standards by providing management insights. Traditional methods of goat behavior detection are inefficient and prone to cause stress in goats. Therefore, the development of a convenient and rapid detection method is crucial for the efficiency and quality improvement of the industry. This study introduces a deep learning-based behavior recognition and online detection system for Liaoning Cashmere Goats. We compared the convergence speed and detection accuracy of the two-stage algorithm Faster R-CNN and the one-stage algorithm YOLO in behavior recognition tasks. YOLOv8n demonstrated superior performance, converging within 50 epochs with an average accuracy of 95.31%, making it a baseline for further improvements. We improved YOLOv8n through dataset expansion, algorithm lightweighting, attention mechanism integration, and loss function optimization. Our improved model achieved the highest detection accuracy of 98.11% compared to other state-of-the-art (SOTA) target detection algorithms. The Liaoning Cashmere Goat Online Behavior Detection System demonstrated real-time detection capabilities, with a relatively low error rate compared to manual video review, and can effectively replace manual labor for online behavior detection. This study introduces detection algorithms and develops the Liaoning Cashmere Goat Online Behavior Detection System, offering an effective solution for intelligent goat management. Full article
(This article belongs to the Section Small Ruminants)
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17 pages, 1906 KiB  
Article
Ensiling as a Conservation Technique for Opuntia ficus indica (L.) By-Products: Peel and Pastazzo
by Riccardo Gannuscio, Cinzia Cardamone, Alessandro Vastolo, Caterina Lucia, Angela D’Amico, Giuseppe Maniaci and Massimo Todaro
Animals 2024, 14(22), 3196; https://doi.org/10.3390/ani14223196 - 7 Nov 2024
Viewed by 226
Abstract
Italy is the third largest producer of Opuntia fruits in the world after Mexico and the United States, and 97.72% of these fruits produced by Italy are grown in Sicily. The use of prickly pear fruits or juice leads to a high production [...] Read more.
Italy is the third largest producer of Opuntia fruits in the world after Mexico and the United States, and 97.72% of these fruits produced by Italy are grown in Sicily. The use of prickly pear fruits or juice leads to a high production of by-products. In this study, ensiling was chosen to preserve prickly pear peels (PPPs) and “pastazzo” (PPS) mixed with 12% wheat bran. PPP silage presented a lower DM than PPS silage (20.03 vs. 41.37%; p < 0.01), as well as aNDFom (25.31 vs. 66.66% DM; p < 0.01), but had the best protein content (12.02 vs. 9.55% DM; p < 0.01). For both by-products, fermentation proceeded rapidly with increasing temperature, with the temperature for PPS (38 °C) being higher than that for the PPP (30 °C). Mesophilic LAB (lactic acid bacteria) were detected at higher levels than thermophilic LAB, and rod counts were higher than cocci counts. The detected organic acids and silage pH indicate an optimal fermentation process for these by-products. PPP silage had a higher polyphenol content than PPS silage (30.24 vs. 24.22 mg GAE/g DM; p < 0.01) and, consequently, also higher antioxidant activity. The results of this study on the mineral composition and macro- and micro-nutrients in silage highlight that these by-products are sources of minerals, with high levels of potassium, calcium, and magnesium. Full article
(This article belongs to the Collection Use of Agricultural By-Products in Animal Feeding)
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16 pages, 2690 KiB  
Article
Screening and Functional Prediction of Rumen Microbiota Associated with Methane Emissions in Dairy Cows
by Jiatai Bao, Lei Wang, Shanshan Li, Jiahe Guo, Pan Ma, Xixia Huang, Gang Guo, Hailiang Zhang and Yachun Wang
Animals 2024, 14(22), 3195; https://doi.org/10.3390/ani14223195 - 7 Nov 2024
Viewed by 283
Abstract
Agricultural activities are a significant contributor to global greenhouse gas emissions, accounting for 14.5% of total anthropogenic emissions. Specifically, greenhouse gas emissions from beef cattle and dairy cattle constitute 35% and 30% of total global livestock emissions, respectively. This study focuses on dairy [...] Read more.
Agricultural activities are a significant contributor to global greenhouse gas emissions, accounting for 14.5% of total anthropogenic emissions. Specifically, greenhouse gas emissions from beef cattle and dairy cattle constitute 35% and 30% of total global livestock emissions, respectively. This study focuses on dairy cattle, exploring the complex relationships between rumen microbiota and methane emission. The methane emissions of 968 lactating Holstein cows were measured using a laser methane detector (LMD, Shanghai Hesai Technology Co., Ltd., Shanghai, China). Among the measured cows, 107 individuals were further selected into high (HME) and low methane-emitting (LME) groups, including 50 cows in the HME group and 57 in the LME group. This study analyzed differences in rumen microbiota and microbial functions between cows with varying levels of methane emissions. The results showed significant differences in the Simpson and Pielou indices of rumen bacterial communities between the HME and LME groups. Beta diversity analysis revealed significant differences in microbial community structure between the two groups. It was found that the abundance of Bacteroidales and Prevotellaceae in the rumen of cows in the HME group cows was significantly higher than that of cows in the LME group (LDA > 3, p < 0.05). Additionally, bacterial functions related to biosynthesis and carbohydrate metabolism were more active in the HME group. This study revealed distinct differences in the rumen bacterial communities between HME and LME cow in Chinese Holstein cattle, and identified specific bacteria and their functional differences in the HME group. The microbial characteristics and metabolic pathways provide new insights for developing strategies to reduce methane emissions, supporting the sustainable development of the dairy industry. Full article
(This article belongs to the Collection Advances in Cattle Breeding, Genetics and Genomics)
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12 pages, 2995 KiB  
Article
Caspase-8-and Gasdermin D (GSDMD)-Dependent PANoptosis Participate in the Seasonal Atrophy of Scented Glands in Male Muskrats
by Xiaofeng Tong, Xuefei Zhao, Yue Ma, Haimeng Li, Jinpeng Zhang, Zuoyang Zhang, Sirui Hua, Bo Li, Wei Zhang, Yu Zhang and Suying Bai
Animals 2024, 14(22), 3194; https://doi.org/10.3390/ani14223194 - 7 Nov 2024
Viewed by 260
Abstract
The muskrat (Ondatra zibethicus) is an animal with special economic significance whose scented glands rapidly atrophy during the non-breeding season, but the mechanism of atrophy is not clear, with significant differences in apoptotic and pyroptotic signaling pathway expression according to transcriptome [...] Read more.
The muskrat (Ondatra zibethicus) is an animal with special economic significance whose scented glands rapidly atrophy during the non-breeding season, but the mechanism of atrophy is not clear, with significant differences in apoptotic and pyroptotic signaling pathway expression according to transcriptome sequencing. During the non-breeding season, key apoptosis-related genes such as Tnfr1 (TNF Receptor Superfamily Member 1A), TRADD (TNFRSF1A Associated via Death Domain), FADD (Fas Associated via Death Domain), Casp-8 (Cysteine-aspartic proteases-8), and Bax (Bcl-associated X protein) were upregulated in the scented glands, while Bcl2 (B-cell lymphoma-2) expression was downregulated. In the classical pyroptosis pathway, the mRNA expression levels of key genes including Nlrp3 (the Nod-like receptor family pyrin domain-containing 3), ASC (the apoptosis-associated speck-like protein), Casp-1 (Cysteine-aspartic proteases-1), Gsdmd (Gasdermin D), and IL-1β (Interleukin 1 Beta) were higher during the non-breeding season, similar to the transcription level of Ripk1 (Receptor Interacting Serine/Threonine Kinase 1) in the non-canonical pyroptosis pathway, while TAK1 (transforming growth factor kinase) expression was downregulated in this latter pathway. TUNEL assays and immunofluorescence analysis indicated increased apoptosis and GSDMD and Caspase-8 protein levels during the non-breeding season. Indeed, the protein levels of GSDMD-N, Caspase-8 p43, and Caspase-8 p18 were significantly higher during the non-breeding season, while the GSDMD levels were significantly lower compared to the secretion season. These results suggest that apoptosis and pyroptosis play regulatory roles in scented gland atrophy and that there is an interplay between them during this process. Full article
(This article belongs to the Section Mammals)
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18 pages, 2239 KiB  
Article
Unveiling the Hidden Causes: Identifying the Drivers of Human–Elephant Conflict in Nilgiri Biosphere Reserve, Western Ghats, Southern India
by Nagarajan Baskaran, Selvarasu Sathishkumar, Varadharajan Vanitha, Mani Arjun, Perumal Keerthi and Nikshepan Goud Bandhala
Animals 2024, 14(22), 3193; https://doi.org/10.3390/ani14223193 - 7 Nov 2024
Viewed by 270
Abstract
Since the human population is growing beyond the earth’s ability to sustain it, more people are being brought into contact with wildlife, leading to increasing human–wildlife conflict. The Asian elephant, a wide-ranging megaherbivore, is being increasingly threatened by human–elephant conflict [HEC]. Its conservation [...] Read more.
Since the human population is growing beyond the earth’s ability to sustain it, more people are being brought into contact with wildlife, leading to increasing human–wildlife conflict. The Asian elephant, a wide-ranging megaherbivore, is being increasingly threatened by human–elephant conflict [HEC]. Its conservation depends on identifying the causes of HEC and implement measure to mitigate the HEC effectively. We studied the drivers of HEC among five forest divisions in Western Ghats, India, that support a high density of elephants across Asia. Comparing the last six years’ data on HEC with 26 ecological covariates in the GLMM framework, we identified spatiotemporal variations and drivers of crop, and property damages and human casualties. Spatially, HEC was highest in the territorial division and lowest in those declared as Protected Areas earlier. The comparison of crop damage with covariates showed that crop damage decreased with the grass biomass index, elephant density, extent of dry-thorn, and deciduous habitats, and forest range area, while it increased with adult male % and forest range perimeter. Similarly, the property damage by elephants increased with crop damage frequency and human settlement/cultivation area, but decreased with grass biomass, forest range area, and deciduous habitat area. Human casualties due to elephants increased with property damage, ambient temperature, and forest range perimeter, but decreased with grass biomass. Overall, the decrease in HEC with grass biomass, and the increase in HEC with human settlement and forest range perimeter indicate that anthropogenic pressure that decreases the grass biomass and degrades the habitat is the likely root cause of HEC, and minimizing it would reduce overall HEC. Full article
(This article belongs to the Section Wildlife)
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14 pages, 2808 KiB  
Article
An Integrated Profiling of Liver Metabolome and Transcriptome of Pigs Fed Diets with Different Starch Sources
by Miao Yu, Zhenming Li, Yiyan Cui, Ting Rong, Zhimei Tian, Dun Deng, Zhichang Liu, Ruiyang Zhang and Xianyong Ma
Animals 2024, 14(22), 3192; https://doi.org/10.3390/ani14223192 - 7 Nov 2024
Viewed by 205
Abstract
Diets containing higher-amylose-content starches were proved to have some beneficial effects on monogastric animals, such as promoting the proliferation of intestinal probiotics. However, current research on the effects of diets with different starch sources on animals at the extraintestinal level is still very [...] Read more.
Diets containing higher-amylose-content starches were proved to have some beneficial effects on monogastric animals, such as promoting the proliferation of intestinal probiotics. However, current research on the effects of diets with different starch sources on animals at the extraintestinal level is still very limited. We hypothesized that diets with different starch sources may affect lipid-related gene expression and metabolism in the liver of pigs. This study aimed to use adult pig models to evaluate the effects of diets with different starch sources (tapioca starch, TS; pea starch, PS) on the liver gene expressions and metabolism. In total, 48 growing pigs were randomly assigned to the TS and PS diets with 8 replicate pens/group and 3 pigs per pen. On day 44 of the experiment, liver samples were collected for metabolome and transcriptome analysis. Metabolome data suggested that different starch sources affected (p < 0.05) the metabolic patterns of liver. Compared with the TS diet, the PS diet increased (p < 0.05) some unsaturated fatty acids and several amino acids or peptide levels in the liver of pigs. Moreover, transcriptome data indicated the PS diets elevated (p < 0.05) fatty acid β-oxidation-related gene expression in the liver of pigs, and reduced (p < 0.05) unsaturated fatty acid metabolism-related gene expression. The results of quantitative real-time PCR confirmed that the PS diet upregulated (p < 0.05) the expression of acyl-CoA dehydrogenase very long chain (ACADVL), carnitine palmitoyl transferase (CPT) 1A, and malonyl-CoA decarboxylase (MLYCD), and downregulated (p < 0.05) the expression level of cytochrome P450 2U1 (CYP2U1) and aldehyde dehydrogenase 1B1 (ALDH1B1) in the liver. In addition, the results of a Mantel test indicated the muscle fatty acids were significantly closely correlated (p < 0.05) with liver gene expressions and metabolites. In summary, these findings suggest that diets containing higher amylose starches improved the lipid degradation and the unsaturated fatty acid levels in pig livers, and thus can generate some potential beneficial effects (such as anti-inflammatory and antioxidant) on pig health. Full article
(This article belongs to the Section Pigs)
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24 pages, 7146 KiB  
Article
Molecular and Functional Analysis of the Stearoyl-CoA Desaturase (SCD) Gene in Buffalo: Implications for Milk Fat Synthesis
by Wenbin Dao, Xinyang Fan, Jianping Liang, Tao Chen, Zaoshang Chang, Yongyun Zhang and Yongwang Miao
Animals 2024, 14(22), 3191; https://doi.org/10.3390/ani14223191 - 7 Nov 2024
Viewed by 206
Abstract
The SCD is a rate-limiting enzyme that catalyzes the synthesis of monounsaturated fatty acids (MUFAs) in dairy cows; however, its role in the mammary gland of buffalo is not well understood. In this study, we isolated and characterized the complete coding sequence (CDS) [...] Read more.
The SCD is a rate-limiting enzyme that catalyzes the synthesis of monounsaturated fatty acids (MUFAs) in dairy cows; however, its role in the mammary gland of buffalo is not well understood. In this study, we isolated and characterized the complete coding sequence (CDS) of the buffalo SCD gene from mammary gland tissue and investigated its effects on milk fat synthesis using bioinformatics analyses, tissue differential expression detection, and cellular functional experiments. The cloned SCD gene has a CDS length of 1080 bp, encoding a protein of 359 amino acids. This protein is hydrophilic, lacks a signal peptide, and contains four transmembrane domains, including 10 conserved motifs and a Delta9-FADS domain, characteristic of the fatty acid desaturase family involved in unsaturated fatty acid biosynthesis within the endoplasmic reticulum. Molecular characterization revealed that the physicochemical properties, conserved domains, structures, and functions of buffalo SCD are highly similar to those in other Bovidae species. Among the tissues analyzed, SCD expression was highest in the mammary gland during lactation and in the cerebellum during dry-off period. Notably, SCD expression in the mammary gland was significantly higher during lactation compared to the dry-off period. Subcellular localization experiments confirmed that SCD functions in the endoplasmic reticulum of buffalo mammary epithelial cells (BuMECs). Functional overexpression and interference experiments in BuMECs demonstrated that SCD promotes milk fat synthesis by affecting the expression of lipid synthesis-related genes such as ACACA, FASN, and DGAT1, as well as milk fat regulatory genes like SREBFs and PPARG, thereby influencing intracellular triglyceride (TAG) content. Additionally, 18 single-nucleotide polymorphisms (SNPs) were identified in the buffalo SCD gene, with a specific SNP at c.-605, showing potential as molecular markers for improving milk production traits. These findings highlight that the SCD gene is a key gene in buffalo milk fat synthesis, involved in the de novo synthesis of milk fatty acids. Full article
(This article belongs to the Section Animal Genetics and Genomics)
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23 pages, 9555 KiB  
Article
Multi-View Fusion-Based Automated Full-Posture Cattle Body Size Measurement
by Zhihua Wu, Jikai Zhang, Jie Li and Wentao Zhao
Animals 2024, 14(22), 3190; https://doi.org/10.3390/ani14223190 - 7 Nov 2024
Viewed by 228
Abstract
Cattle farming is an important part of the global livestock industry, and cattle body size is the key indicator of livestock growth. However, traditional manual methods for measuring body sizes are not only time-consuming and labor-intensive but also incur significant costs. Meanwhile, automatic [...] Read more.
Cattle farming is an important part of the global livestock industry, and cattle body size is the key indicator of livestock growth. However, traditional manual methods for measuring body sizes are not only time-consuming and labor-intensive but also incur significant costs. Meanwhile, automatic measurement techniques are prone to being affected by environmental conditions and the standing postures of livestock. To overcome these challenges, this study proposes a multi-view fusion-driven automatic measurement system for full-attitude cattle body measurements. Outdoors in natural light, three Zed2 cameras were installed covering different views of the channel. Multiple images, including RGB images, depth images, and point clouds, were automatically acquired from multiple views using the YOLOv8n algorithm. The point clouds from different views undergo multiple denoising to become local point clouds of the cattle body. The local point clouds are coarsely and finely aligned to become a complete point cloud of the cattle body. After detecting the 2D key points on the RGB image created by the YOLOv8x-pose algorithm, the 2D key points are mapped onto the 3D cattle body by combining the internal parameters of the camera and the depth values of the corresponding pixels of the depth map. Based on the mapped 3D key points, the body sizes of cows in different poses are automatically measured, including height, length, abdominal circumference, and chest circumference. In addition, support vector machines and Bézier curves are employed to rectify the missing and deformed circumference body sizes caused by environmental effects. The automatic body measurement system measured the height, length, abdominal circumference, and chest circumference of 47 Huaxi Beef Cattle, a breed native to China, and compared the results with manual measurements. The average relative errors were 2.32%, 2.27%, 3.67%, and 5.22%, respectively, when compared with manual measurements, demonstrating the feasibility and accuracy of the system. Full article
(This article belongs to the Section Cattle)
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11 pages, 410 KiB  
Article
Association of Equine Squamous and Glandular Gastric Disease with Dental Status in 54 Horses
by Rabea Lensing, Caroline Wirth, Franziska Thünker, Roswitha Merle and Ann Kristin Barton
Animals 2024, 14(22), 3189; https://doi.org/10.3390/ani14223189 - 7 Nov 2024
Viewed by 263
Abstract
Gastric pH is a key factor in the development of equine squamous gastric disease (ESGD). Although acid injury is unlikely the primary cause of equine glandular gastric disease (EGGD), low pH may promote mucosal damage. Gastric pH is influenced by roughage uptake, as [...] Read more.
Gastric pH is a key factor in the development of equine squamous gastric disease (ESGD). Although acid injury is unlikely the primary cause of equine glandular gastric disease (EGGD), low pH may promote mucosal damage. Gastric pH is influenced by roughage uptake, as chewing increases the alkaline saliva production. The proton pump inhibitor omeprazole is currently recommended by the American/European College of Veterinary/Equine Internal Medicine (ACVIM/ECEIM) for ESGD and EGGD. We hypothesized that dental disorders decrease saliva production and gastric pH, predisposing horses to EGUS. Gastroscopy, intragastric pH measurement and dental examinations were performed (n = 54). Omeprazole therapy was recommended (n = 32), dental disorders were corrected (n = 22) and gastroscopy was repeated 4 weeks later (n = 9). An influence of moderate to severe dental disorders on ESGD (grade ≥ 2/4) (p = 0.394) and EGGD (grade ≥ 2/3) (p = 0.857) could not be determined. Nevertheless, there was a trend that moderate to severe dental disorders were associated with a low gastric pH ≤ 4 (p = 0.100). Horses with no or mild dental problems had a mean pH of 5.4 versus 4.2 in moderate to severe dental disorders. In conclusion, our study results do not show a direct relationship between dental disorders and EGUS, but a gastric and oral cavity examination should still be considered in patients presented for weight loss or inappetence. Full article
(This article belongs to the Special Issue Advances in Equine Sports Medicine, Therapy and Rehabilitation)
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12 pages, 2321 KiB  
Article
The Role of the Equestrian Professional in Bridle and Bit Fit in the United Kingdom
by Kathryn Nankervis, Jane M. Williams, Diana Fisher and Russell MacKechnie-Guire
Animals 2024, 14(22), 3188; https://doi.org/10.3390/ani14223188 - 6 Nov 2024
Viewed by 243
Abstract
To ensure the comfort of ridden horses, equipment including bridles and bits should be suitable and fit correctly. Horse owners employ a variety of equestrian professionals with varying degrees of responsibility regarding bridle and bit fit. This study aimed to compare the frequency [...] Read more.
To ensure the comfort of ridden horses, equipment including bridles and bits should be suitable and fit correctly. Horse owners employ a variety of equestrian professionals with varying degrees of responsibility regarding bridle and bit fit. This study aimed to compare the frequency and manner in which equestrian professionals within a multidisciplinary team (MDT) engage with clients on matters of bridle and bit fit, and to capture their perceptions of the key issues in bridle and bit fit. The participants completed an online questionnaire to obtain information regarding participant demographics, bridle fit and bit fit for the horse. Descriptive statistics and Kruskal–Wallis analyses were performed (p ≤ 0.05). Inductive content analysis identified themes from open-question responses. The results from 377 respondents were analyzed: 184 saddle fitters, 116 coaches and 77 therapists. The results showed that 65% of coaches ‘nearly always’ or ‘very often’ ask clients when they last had their bridle fitted, which was significantly more than saddle fitters (p = 0.002). More saddle fitters assess bridle fit statically and dynamically compared with coaches (p = 0.02). ‘Browband too small’ featured in the top three bridle fit issues for all professions. More professionals reported issues of bit suitability than fit. The findings demonstrate that whilst various equestrian professionals assess and act upon issues of bridle and bit fit, the extent to which this occurs is lower than for the saddle. Further work should quantify the prevalence of issues in bridle and bit fit and suitability in ridden horses. Full article
(This article belongs to the Section Equids)
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17 pages, 4176 KiB  
Article
Using an Automated Operant Conditioning Procedure to Test Colour Discrimination in Two Juvenile Piranhas, Pygocentrus nattereri: A Lesson on Failures and Pitfalls and How to Avoid Them
by Christian Agrillo and Alessandra Pecunioso
Animals 2024, 14(22), 3187; https://doi.org/10.3390/ani14223187 - 6 Nov 2024
Viewed by 245
Abstract
Most studies on the cognitive abilities of fish have focused on model organisms adopted in behavioural neuroscience. To date, little attention has been devoted to characiformes fish and we record a lack of cognitive investigation on the piranha. In this study, we conducted [...] Read more.
Most studies on the cognitive abilities of fish have focused on model organisms adopted in behavioural neuroscience. To date, little attention has been devoted to characiformes fish and we record a lack of cognitive investigation on the piranha. In this study, we conducted a preliminary set of experiments to assess whether red-bellied piranhas (Pygocentrus nattereri) can solve an automated operant conditioning task, specifically, a reversal learning task. In Experiment 1, the fish were required to discriminate between red and green, while in Experiment 2, they had to discriminate between white and yellow. In either case, we found no evidence of learning capacities with our protocol after extensive training exceeding one thousand trials overall. In Experiment 3, we simplified the learning task by using achromatic stimuli (black and white discrimination) and always presenting the reinforced stimulus on the same side of the tank (a combination of response learning and place learning). Subjects did learn how to discriminate between the colours, although no subject was able to reach the criterion in the subsequent reversal learning task, suggesting that piranhas may be limited in their cognitive flexibility. However, our training procedure may have been inefficient in addressing this issue. We outline some potential limitations of the current methodology to help to establish a more effective approach for investigating operant conditioning in this species. Full article
(This article belongs to the Section Human-Animal Interactions, Animal Behaviour and Emotion)
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19 pages, 1070 KiB  
Article
Social Enrichment Improves Affective State and Foraging Behavior Compared to Physical Enrichment, While Maintaining Growth Performance in Broiler Chickens
by Sofía Herrera-Alcaíno, Daniela Luna, Jorge González-Pavez, Paloma Cordero and Sergio A. Guzmán-Pino
Animals 2024, 14(22), 3186; https://doi.org/10.3390/ani14223186 - 6 Nov 2024
Viewed by 410
Abstract
Environmental enrichment is key for improving the broiler welfare in intensive production systems. This study lasted for 43 days and evaluated the effects of physical and social enrichment on broiler welfare. A total of 96 one-day-old male broilers were divided into two treatments: [...] Read more.
Environmental enrichment is key for improving the broiler welfare in intensive production systems. This study lasted for 43 days and evaluated the effects of physical and social enrichment on broiler welfare. A total of 96 one-day-old male broilers were divided into two treatments: control treatment, provided with physical enrichment (n = 48) including perches, platforms, and straw bales; and social treatment (n = 48), involving regular positive interactions with a human. The behavioral repertoire, footpad health, taste preferences for sweet and umami compounds, affective states (through tonic immobility and attention bias tests), and growth performance were evaluated. No effects were found for feeding, drinking, locomotion, lying, or standing behaviors, although differences were observed at specific time points: the Social group had more feeding time on day 21 (p = 0.046), while physical treatment showed reductions on days 28 and 35 (p < 0.001). The Social group showed increased drinking on day 42 (p < 0.001), reduced locomotion (p = 0.022), and increased lying (p = 0.046) on day 42. Foraging was higher in the Social group (p = 0.027), but preening showed no differences. Footpad lesions showed no significant differences. The Control group preferred sucrose 100 mM (p = 0.022), but no preference for MSG 300 mM was observed. With regard to tonic immobility, the Control group showed a tendency towards larger durations (p = 0.078), indicating a potential increase in fearfulness. In the attention bias test, although the freezing behavior increased, the latency to begin feeding was shorter in the Social group (p < 0.001), suggesting an improved affective state. Lastly, no significant differences were observed for any of the growth parameters, including average daily feed intake, average daily gain, feed conversion ratio, or final body weight, indicating that the Social group maintained productivity. This approach provides a practical solution for improving the quality of life for broilers in intensive systems. Full article
(This article belongs to the Special Issue Advances in Poultry Behaviour and Welfare)
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12 pages, 2638 KiB  
Article
Tick Infestation and Molecular Detection of Tick-Borne Pathogens from Indian Long-Eared Hedgehogs (Hemiechinus collaris) in Pakistan
by Shahzad Ali, Michael E. von Fricken, Asima Azam, Ahmad Hassan, Nora G. Cleary, Kiran Iftikhar, Muhammad Imran Rashid and Abdul Razzaq
Animals 2024, 14(22), 3185; https://doi.org/10.3390/ani14223185 - 6 Nov 2024
Viewed by 285
Abstract
Hedgehogs can act as reservoirs for the transmission of tick-borne pathogens (TBPs) to domestic livestock, wild animals, and humans. Understanding host–tick dynamics is essential to evaluate the impact of TBPs. This study was conducted in Pakistan and aimed to determine the prevalence and [...] Read more.
Hedgehogs can act as reservoirs for the transmission of tick-borne pathogens (TBPs) to domestic livestock, wild animals, and humans. Understanding host–tick dynamics is essential to evaluate the impact of TBPs. This study was conducted in Pakistan and aimed to determine the prevalence and species of TBPs in the blood and ticks of Indian long-eared hedgehogs captured from various environments. A total of 64 hedgehogs were captured to check for tick infestation. Tick species were identified morphologically and molecularly including ITS-2 region amplification by PCR and subsequent Sanger sequencing. Moreover, TBPs were identified in both ticks and the blood of hedgehogs through conventional PCR and sequencing, targeting the regions msp1b, 18S rRNA, and cytb for Anaplasma spp., Babesia spp., and Theileria spp., respectively. Out of 64 hedgehogs, 16 (25%) were found to be infested with ticks. Morphological and molecular analysis identified all 109 collected ticks as Rhipicephalus turanicus. Only one hedgehog (6.2%) was infected with A. marginale. From the tick samples, 3.7% tested positive for Theileria lestoquardi, 2.8% for Anaplasma marginale, and another 2.8% for Babesia bigemina. This study provides critical insights into circulating TBPs in this region and what possible role hedgehogs might play in disease maintenance for Anaplasma marginale while identifying multiple pathogens that are of concern to human and animal health. Full article
(This article belongs to the Special Issue Disease and Health in Free-Ranging and Captive Wildlife: Second Edition)
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