The denaturation undergone by α–helical poly(
L-glutamic acid) (P
LGA) in
N,
N-dimethylformamide upon addition of guanidine hydrochloride (GdHCl) was characterized by comparing the fluorescence of a series of P
LGA constructs randomly labeled with the dye pyrene
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The denaturation undergone by α–helical poly(
L-glutamic acid) (P
LGA) in
N,
N-dimethylformamide upon addition of guanidine hydrochloride (GdHCl) was characterized by comparing the fluorescence of a series of P
LGA constructs randomly labeled with the dye pyrene (Py-P
LGA) to that of a series of Py-P
DLGA samples prepared from a racemic mixture of
D,
L-glutamic acid. The process of pyrene excimer formation (PEF) was taken advantage of to probe changes in the conformation of α–helical Py-P
LGA. Fluorescence Blob Model (FBM) analysis of the fluorescence decays of the Py-P
LGA and Py-P
DLGA constructs yielded the average number (<
Nblob>) of glutamic acids located inside a
blob, which represented the volume probed by an excited pyrenyl label. <
Nblob> remained constant for randomly coiled Py-P
DLGA but decreased from ~20 to ~10 glutamic acids for the Py-P
LGA samples as GdHCl was added to the solution. The decrease in <
Nblob> reflected the decrease in the local density of P
LGA as the α–helix unraveled in solution. The changes in <
Nblob> with GdHCl concentration was used to determine the change in Gibbs energy required to denature the P
LGA α–helix in DMF. The relationship between <
Nblob> and the local density of macromolecules can now be applied to characterize the conformation of macromolecules in solution.
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