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International Journal of Molecular Sciences, Volume 25, Issue 5

2024 March-1 - 629 articles

Cover Story: Extracellular vesicles (EVs) are a diverse group of particles that are taken up by cells to affect a variety of signaling cascades. Recently, cell type-specific extracellular vesicles (CTS-EVs) have garnered attention for their unique biogenesis and molecular composition, as they enable highly targeted cell-specific communication that affects a variety of physiological functions. These properties are also exploited for disease propagation, such as in cancer, neurological disorders, autoimmune conditions, and more. The insights gained from analyzing CTS-EVs in different biological roles not only enhance our understanding of physiology but also open new avenues for diagnostic biomarkers and therapeutic targets for a wide spectrum of disorders. View this paper
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Articles (629)

  • Editorial
  • Open Access
1 Citations
2,406 Views
4 Pages

Advanced Therapy Medicinal Products as Potential Therapeutic Strategy against COVID-19 and Immune-Related Disorders

  • Panagiotis Mallis,
  • Efstathios Michalopoulos and
  • Catherine Stavropoulos-Giokas

Advanced Therapy Medicinal Products (ATMPs) comprise a heterogenous class of innovative medicinal products, which further require extensive preclinical and clinical assessments before their broader use in the general population [...]

  • Article
  • Open Access
11 Citations
2,800 Views
21 Pages

This work aimed to identify the chemical compounds of Cinnamomum burmannii leaf essential oil (CBLEO) and to unravel the antibacterial mechanism of CBLEO at the molecular level for developing antimicrobials. CBLEO had 37 volatile compounds with abund...

  • Article
  • Open Access
3 Citations
3,072 Views
15 Pages

Tissue Hypoxia and Associated Innate Immune Factors in Experimental Autoimmune Optic Neuritis

  • Zhiyuan Yang,
  • Cristina Marcoci,
  • Hatice Kübra Öztürk,
  • Eleni Giama,
  • Ayse Gertrude Yenicelik,
  • Ondřej Slanař,
  • Christopher Linington,
  • Roshni Desai and
  • Kenneth J. Smith

Visual loss in acute optic neuritis is typically attributed to axonal conduction block due to inflammatory demyelination, but the mechanisms remain unclear. Recent research has highlighted tissue hypoxia as an important cause of neurological deficits...

  • Article
  • Open Access
3 Citations
2,909 Views
19 Pages

The CHD Protein Kismet Restricts the Synaptic Localization of Cell Adhesion Molecules at the Drosophila Neuromuscular Junction

  • Ireland R. Smith,
  • Emily L. Hendricks,
  • Nina K. Latcheva,
  • Daniel R. Marenda and
  • Faith L. W. Liebl

The appropriate expression and localization of cell surface cell adhesion molecules must be tightly regulated for optimal synaptic growth and function. How neuronal plasma membrane proteins, including cell adhesion molecules, cycle between early endo...

  • Article
  • Open Access
3 Citations
3,233 Views
19 Pages

Recent mechanistic studies have indicated that combinations of radiotherapy (RT) plus immunotherapy (via CSF-1R inhibition) can serve as a strategy to overcome RT resistance and improve the survival of glioma mice. Given the high mortality rate for g...

  • Review
  • Open Access
59 Citations
31,835 Views
19 Pages

Pathophysiology and Main Molecular Mechanisms of Urinary Stone Formation and Recurrence

  • Flavia Tamborino,
  • Rossella Cicchetti,
  • Marco Mascitti,
  • Giulio Litterio,
  • Angelo Orsini,
  • Simone Ferretti,
  • Martina Basconi,
  • Antonio De Palma,
  • Matteo Ferro and
  • Luigi Schips
  • + 1 author

Kidney stone disease (KSD) is one of the most common urological diseases. The incidence of kidney stones has increased dramatically in the last few decades. Kidney stones are mineral deposits in the calyces or the pelvis, free or attached to the rena...

  • Article
  • Open Access
13 Citations
3,287 Views
21 Pages

Hepatocellular carcinoma is one of the most common malignant tumors in the world and shows strong metastatic potential. Current medicine for hepatocellular carcinoma therapy is invalid, while Scutellaria baicalensis Georgi exhibits the pharmaceutical...

  • Article
  • Open Access
2 Citations
2,446 Views
20 Pages

Genome-Wide Identification, Characterization, and Expression Analysis of the BES1 Family Genes under Abiotic Stresses in Phoebe bournei

  • Jingshu Li,
  • Honggang Sun,
  • Yanhui Wang,
  • Dunjin Fan,
  • Qin Zhu,
  • Jiangyonghao Zhang,
  • Kai Zhong,
  • Hao Yang,
  • Weiyin Chang and
  • Shijiang Cao

The BRI1 EMS suppressor 1(BES1) transcription factor is a crucial regulator in the signaling pathway of Brassinosteroid (BR) and plays an important role in plant growth and response to abiotic stress. Although the identification and functional valida...

  • Article
  • Open Access
1 Citations
3,249 Views
19 Pages

Single-cell RNA sequencing (scRNAseq) is a crucial tool in kidney research. These technologies cluster cells based on transcriptome similarity, irrespective of the anatomical location and order within the nephron. Thus, a transcriptome cluster may ob...

  • Article
  • Open Access
2 Citations
2,318 Views
15 Pages

Toxicity of Water-Soluble D-g-PNIPAM Polymers in a Complex with Chemotherapy Drugs and Mechanism of Their Action In Vitro

  • Svitlana Prylutska,
  • Anna Grebinyk,
  • Stanislav Ponomarenko,
  • Defne Gövem,
  • Vasyl Chumachenko,
  • Nataliya Kutsevol,
  • Mykola Petrovsky,
  • Uwe Ritter,
  • Marcus Frohme and
  • Yuriy Prylutskyy
  • + 1 author

The application of a biocompatible polymer nanocarrier can provide target delivery to tumor tissues, improved pharmacokinetics, controlled drug release, etc. Therefore, the proposed strategy was to use the water-soluble star-like copolymers with a De...

  • Article
  • Open Access
10 Citations
5,472 Views
14 Pages

The role of the epidermal growth factor receptor (EGFR) in tumor progression and survival is often underplayed. Its expression and/or dysregulation is associated with disease advancement and poor patient outcome as well as drug resistance in breast c...

  • Article
  • Open Access
3 Citations
2,387 Views
12 Pages

OPRM1 Gene Polymorphism in Women with Alcohol Use Disorder

  • Agnieszka Boroń,
  • Aleksandra Suchanecka,
  • Krzysztof Chmielowiec,
  • Małgorzata Śmiarowska,
  • Jolanta Chmielowiec,
  • Aleksandra Strońska-Pluta,
  • Remigiusz Recław and
  • Anna Grzywacz

The main aims of the present study were to explore the relationship of the OPRM1 gene rs1074287 polymorphism in alcohol-dependent women with their personality traits and to try to find out whether any specific features may influence alcohol cravings...

  • Article
  • Open Access
6 Citations
3,487 Views
13 Pages

Early Increase in Blood–Brain Barrier Permeability in a Murine Model Exposed to Fifteen Days of Intermittent Hypoxia

  • Frederic Roche,
  • Anne Briançon-Marjollet,
  • Maurice Dematteis,
  • Marie Baldazza,
  • Brigitte Gonthier,
  • Frederique Bertholon,
  • Nathalie Perek and
  • Jean-Louis Pépin

Obstructive sleep apnea (OSA) is characterized by intermittent repeated episodes of hypoxia–reoxygenation. OSA is associated with cerebrovascular consequences. An enhanced blood–brain barrier (BBB) permeability has been proposed as a mark...

  • Article
  • Open Access
3 Citations
2,045 Views
17 Pages

Mitochondrial plasticity, marked by a dynamism between glycolysis and oxidative phosphorylation due to adaptation to genetic and microenvironmental alterations, represents a characteristic feature of melanoma progression. Sphingolipids play a signifi...

  • Article
  • Open Access
3,302 Views
14 Pages

The Potential of Twendee X® as a Safe Antioxidant Treatment for Systemic Sclerosis

  • Fukka You,
  • Carole Nicco,
  • Yoshiaki Harakawa,
  • Toshikazu Yoshikawa and
  • Haruhiko Inufusa

Systemic sclerosis (SSc) is an autoimmune disease characterized by systemic skin hardening, which combines Raynaud’s phenomenon and other vascular disorders, skin and internal organ fibrosis, immune disorders, and a variety of other abnormaliti...

  • Article
  • Open Access
7 Citations
2,537 Views
19 Pages

Evaluating Temperature Effects on Bluetongue Virus Serotype 10 and 17 Coinfection in Culicoides sonorensis

  • Molly Carpenter,
  • Jennifer Kopanke,
  • Justin Lee,
  • Case Rodgers,
  • Kirsten Reed,
  • Tyler J. Sherman,
  • Barbara Graham,
  • Lee W. Cohnstaedt,
  • William C. Wilson and
  • Christie Mayo
  • + 1 author

Bluetongue virus (BTV) is a segmented, double-stranded RNA virus transmitted by Culicoides midges that infects ruminants. As global temperatures increase and geographical ranges of midges expand, there is increased potential for BTV outbreaks from in...

  • Article
  • Open Access
8 Citations
3,053 Views
18 Pages

Computational Modeling of the Interactions between DPP IV and Hemorphins

  • Priya Antony,
  • Bincy Baby,
  • Amie Jobe and
  • Ranjit Vijayan

Type 2 diabetes is a chronic metabolic disorder characterized by high blood glucose levels due to either insufficient insulin production or ineffective utilization of insulin by the body. The enzyme dipeptidyl peptidase IV (DPP IV) plays a crucial ro...

  • Article
  • Open Access
5 Citations
2,613 Views
18 Pages

Patients with inflammatory bowel disease (IBD) who experience long-term chronic inflammation of the colon are at an increased risk of developing colorectal cancer (CRC). Mitotic spindle positioning (MISP), an actin-binding protein, plays a role in mi...

  • Review
  • Open Access
10 Citations
6,468 Views
19 Pages

Oxy-Inflammation in Humans during Underwater Activities

  • Alessandra Vezzoli,
  • Simona Mrakic-Sposta,
  • Andrea Brizzolari,
  • Costantino Balestra,
  • Enrico Maria Camporesi and
  • Gerardo Bosco

Underwater activities are characterized by an imbalance between reactive oxygen/nitrogen species (RONS) and antioxidant mechanisms, which can be associated with an inflammatory response, depending on O2 availability. This review explores the oxidativ...

  • Review
  • Open Access
8 Citations
7,601 Views
14 Pages

The Incredible Adventure of Omalizumab

  • Christian Domingo,
  • Daniel R. Monserrate,
  • Ana Sogo and
  • Rosa M. Mirapeix

The basis of our current understanding of allergies begins with the discovery of IgE in the mid-1960s. The whole theory of the physiology and pathophysiology of allergic diseases, including rhinitis and asthma, dates from that period. Among the key r...

  • Article
  • Open Access
1 Citations
1,732 Views
15 Pages

MicroRNA-133b Dysregulation in a Mouse Model of Cervical Contusion Injury

  • James Young Ho Yu,
  • Thomas C. Chen and
  • Camelia A. Danilov

Our previous research studies have demonstrated the role of microRNA133b (miR133b) in healing the contused spinal cord when administered either intranasally or intravenously 24 h following an injury. While our data showed beneficial effects of exogen...

  • Brief Report
  • Open Access
1 Citations
2,017 Views
11 Pages

Familial Dilated Cardiomyopathy: A Novel MED9 Short Isoform Identification

  • Monica Franzese,
  • Mario Zanfardino,
  • Andrea Soricelli,
  • Annapaola Coppola,
  • Ciro Maiello,
  • Marco Salvatore,
  • Concetta Schiano and
  • Claudio Napoli

Familial dilated cardiomyopathy (DCM) is among the leading indications for heart transplantation. DCM alters the transcriptomic profile. The alteration or activation/silencing of physiologically operating transcripts may explain the onset and progres...

  • Article
  • Open Access
3 Citations
2,320 Views
17 Pages

iBio-GATS—A Semi-Automated Workflow for Structural Modelling of Insect Odorant Receptors

  • Vaanathi Chidambara Thanu,
  • Amara Jabeen and
  • Shoba Ranganathan

Insects utilize seven transmembrane (7TM) odorant receptor (iOR) proteins, with an inverted topology compared to G-protein coupled receptors (GPCRs), to detect chemical cues in the environment. For pest biocontrol, chemical attractants are used to tr...

  • Article
  • Open Access
3 Citations
2,523 Views
14 Pages

A Combination of Library Screening and Rational Mutagenesis Expands the Available Color Palette of the Smallest Fluorogen-Activating Protein Tag nanoFAST

  • Nadezhda S. Baleeva,
  • Yulia A. Bogdanova,
  • Marina V. Goncharuk,
  • Anatolii I. Sokolov,
  • Ivan N. Myasnyanko,
  • Vadim S. Kublitski,
  • Alexander Yu. Smirnov,
  • Aidar R. Gilvanov,
  • Sergey A. Goncharuk and
  • Mikhail S. Baranov
  • + 1 author

NanoFAST is the smallest fluorogen-activating protein, consisting of only 98 amino acids, used as a genetically encoded fluorescent tag. Previously, only a single fluorogen with an orange color was revealed for this protein. In the present paper, usi...

  • Article
  • Open Access
5 Citations
2,385 Views
20 Pages

New Biocides Based on N4-Alkylcytidines: Effects on Microorganisms and Application for the Protection of Cultural Heritage Objects of Painting

  • Liudmila A. Alexandrova,
  • Ivan A. Oskolsky,
  • Dmitry A. Makarov,
  • Maxim V. Jasko,
  • Inna L. Karpenko,
  • Olga V. Efremenkova,
  • Byazilya F. Vasilyeva,
  • Darya A. Avdanina,
  • Anna A. Ermolyuk and
  • Alexander A. Zhgun
  • + 7 authors

The rapid increase in the antibiotic resistance of microorganisms, capable of causing diseases in humans as destroying cultural heritage sites, is a great challenge for modern science. In this regard, it is necessary to develop fundamentally novel an...

  • Review
  • Open Access
14 Citations
5,322 Views
13 Pages

TGF-β Signaling Pathways in the Development of Diabetic Retinopathy

  • Andrew Callan,
  • Sonal Jha,
  • Laura Valdez,
  • Lois Baldado and
  • Andrew Tsin

Diabetic retinopathy (DR), a prevalent complication of diabetes mellitus affecting a significant portion of the global population, has long been viewed primarily as a microvascular disorder. However, emerging evidence suggests that it should be redef...

  • Review
  • Open Access
27 Citations
6,872 Views
14 Pages

Astroglia constitute the largest group of glial cells and are involved in numerous actions that are critical to neuronal development and functioning, such as maintaining the blood–brain barrier, forming synapses, supporting neurons with nutrien...

  • Article
  • Open Access
3 Citations
3,404 Views
17 Pages

Different Patterns of Platinum Resistance in Ovarian Cancer Cells with Homologous Recombination Proficient and Deficient Background

  • Michela Chiappa,
  • Federica Guffanti,
  • Chiara Grasselli,
  • Nicolò Panini,
  • Alessandro Corbelli,
  • Fabio Fiordaliso and
  • Giovanna Damia

Platinum compounds are very active in first-line treatments of ovarian carcinoma. In fact, high rates of complete remission are achieved, but most patients eventually relapse with resistant disease. Many mechanisms underlying the platinum-resistant p...

  • Article
  • Open Access
1 Citations
1,787 Views
22 Pages

The Specific Molecular Changes Induced by Diabetic Conditions in Valvular Endothelial Cells and upon Their Interactions with Monocytes Contribute to Endothelial Dysfunction

  • Monica Madalina Tucureanu,
  • Letitia Ciortan,
  • Razvan Daniel Macarie,
  • Andreea Cristina Mihaila,
  • Ionel Droc,
  • Elena Butoi and
  • Ileana Manduteanu

Aortic valve disease (AVD) represents a global public health challenge. Research indicates a higher prevalence of diabetes in AVD patients, accelerating disease advancement. Although the specific mechanisms linking diabetes to valve dysfunction remai...

  • Article
  • Open Access
3 Citations
2,315 Views
16 Pages

E0703, a new steroidal compound optimized from estradiol, significantly increased cell proliferation and the survival rate of KM mice and beagles after ionizing radiation. In this study, we characterize its preclinical pharmacokinetics (PK) and predi...

  • Review
  • Open Access
14 Citations
4,994 Views
20 Pages

Zinc transporters take up/release zinc ions (Zn2+) across biological membranes and maintain intracellular and intra-organellar Zn2+ homeostasis. Since this process requires a series of conformational changes in the transporters, detailed information...

  • Article
  • Open Access
1 Citations
2,520 Views
15 Pages

Commercial papaya varieties grown in Australia vary greatly in taste and aroma. Previous profiling has identified undesirable ‘off tastes’ in existing varieties, discouraging a portion of the population from consuming papayas. Our focus o...

  • Article
  • Open Access
1 Citations
2,178 Views
13 Pages

Single Nucleotide Polymorphism in Cell Adhesion Molecule L1 Affects Learning and Memory in a Mouse Model of Traumatic Brain Injury

  • Haoyu Jiang,
  • Anna O. Giarratana,
  • Thomas Theis,
  • Vini Nagaraj,
  • Xiaofeng Zhou,
  • Smita Thakker-Varia,
  • Melitta Schachner and
  • Janet Alder

The L1 cell adhesion molecule (L1) has demonstrated a range of beneficial effects in animal models of spinal cord injury, neurodegenerative disease, and ischemia; however, the role of L1 in TBI has not been fully examined. Mutations in the L1 gene af...

  • Review
  • Open Access
18 Citations
5,546 Views
20 Pages

Alzheimer’s disease (AD) is a progressive neurodegenerative disease mostly affecting the elderly population. It is characterized by cognitive decline that occurs due to impaired neurotransmission and neuronal death. Even though deposition of am...

  • Article
  • Open Access
6 Citations
2,403 Views
15 Pages

Investigation of Serum Endocan Levels in SARS-CoV-2 Patients

  • Laura Constantin,
  • Anca Ungurianu,
  • Anca Streinu-Cercel,
  • Oana Săndulescu,
  • Victoria Aramă,
  • Denisa Margină and
  • Isabela Țârcomnicu

Endocan is an endothelial-cell-specific proteoglycan (ESM-1) and has emerged as an endothelial dysfunction and inflammatory marker in recent years. Endocan can be used as a marker of inflammatory endothelial dysfunction in endothelium-dependent disea...

  • Review
  • Open Access
81 Citations
17,953 Views
14 Pages

Glioblastoma multiforme (GBM) is the most common and malignant type of primary brain tumor in adults. Despite important advances in understanding the molecular pathogenesis and biology of this tumor in the past decade, the prognosis for GBM patients...

  • Article
  • Open Access
3 Citations
3,363 Views
18 Pages

The prognosis of patients with malignant melanoma has been improved in recent decades due to advancements in immunotherapy. However, a considerable proportion of patients are refractory to treatment, particularly at advanced stages. This underscores...

  • Article
  • Open Access
1 Citations
3,049 Views
16 Pages

RAR Inhibitors Display Photo-Protective and Anti-Inflammatory Effects in A2E Stimulated RPE Cells In Vitro through Non-Specific Modulation of PPAR or RXR Transactivation

  • Valérie Fontaine,
  • Thinhinane Boumedine,
  • Elodie Monteiro,
  • Mylène Fournié,
  • Gendre Gersende,
  • José-Alain Sahel,
  • Serge Picaud,
  • Stanislas Veillet,
  • René Lafont and
  • Serge Camelo
  • + 2 authors

N-retinylidene-N-retinylethanolamine (A2E) has been associated with age-related macular degeneration (AMD) physiopathology by inducing cell death, angiogenesis and inflammation in retinal pigmented epithelial (RPE) cells. It was previously thought th...

  • Review
  • Open Access
1 Citations
2,094 Views
13 Pages

Gestational Weight Gain: Is the Role of Genetic Variants a Determinant? A Review

  • Reyna Sámano,
  • Hugo Martínez-Rojano,
  • Gabriela Chico-Barba,
  • Ricardo Gamboa,
  • María Eugenia Mendoza-Flores,
  • Francisco Javier Robles-Alarcón,
  • Itzel Pérez-Martínez and
  • Irma Eloisa Monroy-Muñoz

Excessive or insufficient gestational weight gain (GWG) leads to diverse adverse maternal and neonatal outcomes. There is evidence that pregestational body mass index (pBMI) plays a role in GWG, but no genetic cause has been identified. In this revie...

  • Article
  • Open Access
3 Citations
2,606 Views
18 Pages

We investigated the age-related effects of the lipid-lowering drug fenofibrate on renal stress-associated effectors. Young and old rats were fed standard chow with 0.1% or 0.5% fenofibrate. The kidney cortex tissue structure showed typical aging-rela...

  • Article
  • Open Access
3 Citations
2,676 Views
13 Pages

Functional MICA Variants Are Differentially Associated with Immune-Mediated Inflammatory Diseases

  • Chin-Man Wang,
  • Keng-Poo Tan,
  • Yeong-Jian Jan Wu,
  • Jian-Wen Zheng,
  • Jianming Wu and
  • Ji-Yih Chen

As the principal ligand for NKG2D, MICA elicits the recruitment of subsets of T cells and NK cells in innate immunity. MICA gene variants greatly impact the functionality and expression of MICA in humans. The current study evaluated whether MICA poly...

  • Communication
  • Open Access
4 Citations
2,332 Views
10 Pages

A New Strategy to Investigate RNA:DNA Triplex Using Atomic Force Microscopy

  • Giovanni Merici,
  • Davide Amidani,
  • Giorgio Dieci and
  • Claudio Rivetti

Over the past decade, long non-coding RNAs (lncRNAs) have been recognized as key players in gene regulation, influencing genome organization and expression. The locus-specific binding of these non-coding RNAs (ncRNAs) to DNA involves either a non-cov...

  • Article
  • Open Access
2 Citations
2,132 Views
13 Pages

Bone-Differentiation-Associated Circ-Spen Regulates Death of Mouse Bone Marrow Mesenchymal Stem Cells by Inhibiting Apoptosis and Promoting Autophagy

  • Ziwen Liang,
  • Bingjie Luo,
  • Bojia Peng,
  • Yunchuan Li,
  • Xueling Hu,
  • Wenqiang Zhong,
  • Xiaoyun Li,
  • Panpan Wang,
  • Xiaofeng Zhu and
  • Li Yang
  • + 1 author

The role of estrogen receptor β (ERβ) in bone health is closely associated with its function in vivo, and ERβ−/− mice have been widely utilized to explore the related influences. In this study, ERβ−/− femal...

  • Article
  • Open Access
1 Citations
3,402 Views
20 Pages

The small GTPase RAS acts as a plasma membrane-anchored intracellular neurotrophin counteracting neuronal degeneration in the brain, but the underlying molecular mechanisms are largely unknown. In transgenic mice expressing constitutively activated V...

  • Article
  • Open Access
3 Citations
1,975 Views
16 Pages

Complex Hippocampal Response to Thermal Skin Injury and Protocols with Hyperbaric Oxygen Therapy and Filipendula ulmaria Extract in Rats

  • Bojana Krstic,
  • Dragica Selakovic,
  • Nemanja Jovicic,
  • Milos Krstic,
  • Jelena S. Katanic Stankovic,
  • Sara Rosic,
  • Dragan Milovanovic and
  • Gvozden Rosic

The aim of this study was to evaluate the alterations of the hippocampal function that may be related to anxiogenic response to thermal skin injury, including the morpho-functional alterations, and the effects of hyperbaric oxygen (HBO) and Filipendu...

  • Article
  • Open Access
6 Citations
2,381 Views
17 Pages

Genome-Wide Identification and Drought Stress Response Pattern of the NF-Y Gene Family in Cymbidium sinense

  • Linying Wang,
  • Xuewei Zhao,
  • Ruiyue Zheng,
  • Ye Huang,
  • Cuili Zhang,
  • Meng-Meng Zhang,
  • Siren Lan and
  • Zhong-Jian Liu

Cymbidium sinense, a type of orchid plant, is more drought-resistant and ornamental than other terrestrial orchids. Research has shown that many members of the NUCLEAR FACTOR Y (NF-Y) transcription factor family are responsive to plant growth, develo...

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Int. J. Mol. Sci. - ISSN 1422-0067