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Current Issues in Molecular Biology, Volume 46, Issue 5

2024 May - 68 articles

Cover Story: In this study, we asked whether IFN-I signalling in the CNS is perturbed across the olfactory network in COVID-19 patients. We reconstructed the olfactory pathway from the nasal epithelium to the amygdala, utilizing published datasets of COVID-19 patients’ transcriptomes. We also leveraged published spatially resolved temporal lobe transcriptomes Aβ plaques from AD patients vs. controls, where IFN-I dysregulations have also been identified. We show that IFN-I is dysregulated throughout the olfactory network, and we isolate a gene signature that is shared across the COVID-19 CNS and the spatial response to Αβ pathology, with nine genes associated with an increased risk for Alzheimer’s disease. View this paper
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Articles (68)

  • Article
  • Open Access
5 Citations
2,400 Views
14 Pages

Serine/arginine-rich splicing factors (SRSFs), part of the serine/arginine-rich (SR) protein family, play a crucial role in precursor RNA splicing. Abnormal expression of SRSFs in tumors can disrupt normal RNA splicing, contributing to tumor progress...

  • Article
  • Open Access
1,729 Views
13 Pages

Numerous hereditary ophthalmic diseases display significant genetic diversity. Consequently, the utilization of gene panel sequencing allows a greater number of patients to receive a genetic diagnosis for their clinical manifestations. We investigate...

  • Review
  • Open Access
13 Citations
4,529 Views
19 Pages

Current Knowledge about Gastric Microbiota with Special Emphasis on Helicobacter pylori-Related Gastric Conditions

  • Luigi Santacroce,
  • Skender Topi,
  • Lucrezia Bottalico,
  • Ioannis Alexandros Charitos and
  • Emilio Jirillo

The gastric milieu, because of its very low acidic pH, is very harsh for bacterial growth. The discovery of Helicobacter pylori (H.p.) has opened a new avenue for studies on the gastric microbiota, thus indicating that the stomach is not a sterile en...

  • Review
  • Open Access
10 Citations
5,051 Views
23 Pages

Alzheimer’s Disease (AD) presents a complex neuropathological landscape characterized by hallmark amyloid plaques and neurofibrillary tangles, leading to progressive cognitive decline. Despite extensive research, the molecular intricacies contr...

  • Article
  • Open Access
4 Citations
2,827 Views
17 Pages

Immunohistochemical Expression Levels of Epidermal Growth Factor Receptor, Cyclooxygenase-2, and Ki-67 in Canine Cutaneous Squamous Cell Carcinomas

  • João Miguel Luís,
  • Rita Files,
  • Cláudia Cardoso,
  • José Pimenta,
  • Gabriela Maia,
  • Filipe Silva,
  • Felisbina L. Queiroga,
  • Justina Prada and
  • Isabel Pires

Squamous cell carcinoma (SCC) stands as the second most prevalent skin cancer in dogs, primarily attributed to UV radiation exposure. Affected areas typically include regions with sparse hair and pale or depigmented skin. The significance of spontane...

  • Article
  • Open Access
4 Citations
4,490 Views
16 Pages

Bisphenol A (BPA) and high-fat diets (HFD) are known to adversely affect the kidneys. However, the combined effects of both cases on kidney health and the potential benefits of N-acetylcysteine (NAC) in mitigating these effects have not been investig...

  • Communication
  • Open Access
7 Citations
2,572 Views
11 Pages

Humans are persistently exposed to massive amounts of blue light via sunlight, computers, smartphones, and similar devices. Although the positive and negative effects of blue light on living organisms have been reported, its impact on learning and me...

  • Review
  • Open Access
17 Citations
5,047 Views
39 Pages

Cold plasma (CP) is an ionised gas containing excited molecules and ions, radicals, and free electrons, and which emits electric fields and UV radiation. CP is potently antimicrobial, and can be applied safely to biological tissue, birthing the field...

  • Article
  • Open Access
2,376 Views
11 Pages

Polyhexamethylene Biguanide Reduces High-Risk Human Papilloma Virus Viral Load in Cervical Cell Samples Derived from ThinPrep Pap Test

  • Ludovica Di Fraia,
  • Carla Babalini,
  • Marco Calcagno,
  • Sara Proietti,
  • Elisa Lepore and
  • Pietro Di Fraia

Human papilloma virus (HPV) infection and its progression still represent a great medical challenge worldwide. Clinical evidence has demonstrated the beneficial effects of polyhexamethylene biguanide (PHMB) on HPV clinical manifestations; however, ev...

  • Review
  • Open Access
6 Citations
3,949 Views
29 Pages

Venous thromboembolism (VTE) is a challenging clinical obstacle in oncological settings, marked by elevated incidence rates and resulting morbidity and mortality. In the context of cancer-associated thrombosis (CAT), endothelial dysfunction (ED) play...

  • Case Report
  • Open Access
5 Citations
5,106 Views
13 Pages

Congenital adrenal hyperplasia (CAH) is a group of autosomal recessive genetic defects in cortisol synthesis and shows elevated ACTH concentrations, which in turn has downstream effects. The most common variant of CAH, 21-hydroxylase deficiency (21OH...

  • Article
  • Open Access
5 Citations
2,142 Views
17 Pages

The Biological Impact of Some Phosphonic and Phosphinic Acid Derivatives on Human Osteosarcoma

  • Zakzak Khaled,
  • Gheorghe Ilia,
  • Claudia Watz,
  • Ioana Macașoi,
  • George Drăghici,
  • Vasile Simulescu,
  • Petru Eugen Merghes,
  • Narcis Ion Varan,
  • Cristina Adriana Dehelean and
  • Laurențiu Sima
  • + 1 author

Osteosarcoma malignancy currently represents a major health problem; therefore, the need for new therapy approaches is of great interest. In this regard, the current study aims to evaluate the anti-neoplastic potential of a newly developed phosphinic...

  • Article
  • Open Access
10 Citations
2,239 Views
12 Pages

Development of MetaXplore: An Interactive Tool for Targeted Metagenomic Analysis

  • Naima Bel Mokhtar,
  • Elias Asimakis,
  • Ioannis Galiatsatos,
  • Amal Maurady,
  • Panagiota Stathopoulou and
  • George Tsiamis

Over the last decades, the analysis of complex microbial communities by high-throughput sequencing of marker gene amplicons has become routine work for many research groups. However, the main challenges faced by scientists who want to make use of the...

  • Review
  • Open Access
11 Citations
3,607 Views
16 Pages

Genetic Susceptibility in Endothelial Injury Syndromes after Hematopoietic Cell Transplantation and Other Cellular Therapies: Climbing a Steep Hill

  • Paschalis Evangelidis,
  • Nikolaos Evangelidis,
  • Panagiotis Kalmoukos,
  • Maria Kourti,
  • Athanasios Tragiannidis and
  • Eleni Gavriilaki

Hematopoietic stem cell transplantation (HSCT) remains a cornerstone in the management of patients with hematological malignancies. Endothelial injury syndromes, such as HSCT-associated thrombotic microangiopathy (HSCT-TMA), veno-occlusive disease/si...

  • Review
  • Open Access
2 Citations
2,910 Views
19 Pages

The emergence of combination antiretroviral therapy (cART) has greatly transformed the life expectancy of people living with HIV (PWH). Today, over 76% of the individuals with HIV have access to this life-saving therapy. However, this progress has co...

  • Review
  • Open Access
9 Citations
5,532 Views
17 Pages

In recent years, further evidence has emerged regarding the involvement of extracellular vesicles in various human physiopathological conditions such as Alzheimer’s disease, Parkinson’s disease, irritable bowel syndrome, and mental disord...

  • Review
  • Open Access
10 Citations
4,641 Views
30 Pages

In the context of the growing concern regarding the appearance and spread of emerging pathogens with high resistance to chemically synthetized biocides, the development of new agents for crops and human protection has become an emergency. In this con...

  • Article
  • Open Access
5 Citations
3,718 Views
20 Pages

A Spatial Transcriptomics Browser for Discovering Gene Expression Landscapes across Microscopic Tissue Sections

  • Maria Schmidt,
  • Susanna Avagyan,
  • Kristin Reiche,
  • Hans Binder and
  • Henry Loeffler-Wirth

A crucial feature of life is its spatial organization and compartmentalization on the molecular, cellular, and tissue levels. Spatial transcriptomics (ST) technology has opened a new chapter of the sequencing revolution, emerging rapidly with transfo...

  • Article
  • Open Access
1 Citations
1,869 Views
13 Pages

Subarachnoid hemorrhage (SAH) is a type of stroke caused by bleeding into the subarachnoid space. SAH is a medical emergency and requires prompt treatment to prevent complications such as seizures, stroke, or other brain damage. Treatment options may...

  • Review
  • Open Access
35 Citations
6,541 Views
42 Pages

This review systematizes information about the metabolic features of breast cancer directly related to oxidative stress. It has been shown those redox changes occur at all levels and affect many regulatory systems in the human body. The features of t...

  • Article
  • Open Access
2 Citations
5,081 Views
16 Pages

The Molecular Detection of Germline Mutations in the BRCA1 and BRCA2 Genes Associated with Breast and Ovarian Cancer in a Romanian Cohort of 616 Patients

  • Liliana-Georgiana Grigore,
  • Viorica-Elena Radoi,
  • Alexandra Serban,
  • Adina Daniela Mihai and
  • Ileana Stoica

The objective of this study was to identify and classify the spectrum of mutations found in the BRCA1 and BRCA2 genes associated with breast and ovarian cancer in female patients in Romania. Germline BRCA1 and BRCA2 mutations were investigated in a c...

  • Article
  • Open Access
3 Citations
3,673 Views
21 Pages

In Silico Analysis of Protein–Protein Interactions of Putative Endoplasmic Reticulum Metallopeptidase 1 in Schizosaccharomyces pombe

  • Dalia González-Esparragoza,
  • Alan Carrasco-Carballo,
  • Nora H. Rosas-Murrieta,
  • Lourdes Millán-Pérez Peña,
  • Felix Luna and
  • Irma Herrera-Camacho

Ermp1 is a putative metalloprotease from Schizosaccharomyces pombe and a member of the Fxna peptidases. Although their function is unknown, orthologous proteins from rats and humans have been associated with the maturation of ovarian follicles and in...

  • Review
  • Open Access
1 Citations
2,436 Views
14 Pages

Proteogenomics in Nephrology: A New Frontier in Nephrological Research

  • Kavya Chavali,
  • Holley Coker,
  • Emily Youngblood and
  • Oleg Karaduta

Proteogenomics represents a transformative intersection in nephrology, uniting genomics, transcriptomics, and proteomics to unravel the molecular intricacies of kidney diseases. This review encapsulates the methodological essence of proteogenomics an...

  • Article
  • Open Access
2 Citations
1,887 Views
15 Pages

Ajania pacifica (Nakai) K. Bremer and Humphries Extract Limits MYC Expression to Induce Apoptosis in Diffuse Large B Cell Lymphoma

  • Ye-Rin Woo,
  • Chan-Seong Kwon,
  • Ji-Eun Lee,
  • Byeol-Eun Jeon,
  • Tae-Jin Kim,
  • Joy Choo,
  • Young-Seob Seo and
  • Sang-Woo Kim

The proto-oncogene MYC is frequently dysregulated in patients with diffuse large B-cell lymphoma (DLBCL) and plays a critical role in disease progression. To improve the clinical outcomes of patients with DLBCL, the development of strategies to targe...

  • Article
  • Open Access
3 Citations
4,280 Views
15 Pages

SARS-CoV-2-Induced Type I Interferon Signaling Dysregulation in Olfactory Networks Implications for Alzheimer’s Disease

  • George D. Vavougios,
  • Theodoros Mavridis,
  • Triantafyllos Doskas,
  • Olga Papaggeli,
  • Pelagia Foka and
  • Georgios Hadjigeorgiou

Type I interferon signaling (IFN-I) perturbations are major drivers of COVID-19. Dysregulated IFN-I in the brain, however, has been linked to both reduced cognitive resilience and neurodegenerative diseases such as Alzheimer’s. Previous works f...

  • Review
  • Open Access
5 Citations
3,475 Views
14 Pages

Adverse Skeletal Muscle Adaptations in Individuals Born Preterm—A Comprehensive Review

  • Nick L. Dobson,
  • Danielle E. Levitt,
  • Hui Ying Luk and
  • Heather L. Vellers

Infants born preterm face an increased risk of deleterious effects on lung and brain health that can significantly alter long-term function and quality of life and even lead to death. Moreover, preterm birth is also associated with a heightened risk...

  • Article
  • Open Access
10 Citations
3,421 Views
18 Pages

Serum Levels of Zinc, Albumin, Interleukin-6 and CRP in Patients with Unipolar and Bipolar Depression: Cross Sectional Study

  • Tihana Bagarić,
  • Alma Mihaljević-Peleš,
  • Milena Skočić Hanžek,
  • Maja Živković,
  • Ana Kozmar and
  • Dunja Rogić

Unipolar (UD) and bipolar depression (BDD) show a high degree of similarity in clinical presentations, which complicates the differential diagnosis of these disorders. The aim of this study was to investigate the serum levels of interleukin 6 (IL-6),...

  • Review
  • Open Access
15 Citations
4,997 Views
14 Pages

Role of NR5A1 Gene Mutations in Disorders of Sex Development: Molecular and Clinical Features

  • Giovanni Luppino,
  • Malgorzata Wasniewska,
  • Roberto Coco,
  • Giorgia Pepe,
  • Letteria Anna Morabito,
  • Alessandra Li Pomi,
  • Domenico Corica and
  • Tommaso Aversa

Disorders/differences of sex development (DSDs) are defined as broad, heterogenous groups of congenital conditions characterized by atypical development of genetic, gonadal, or phenotypic sex accompanied by abnormal development of internal and/or ext...

  • Article
  • Open Access
2,632 Views
13 Pages

Evaluation of the Therapeutical Effect of Matricaria Chamomilla Extract vs. Galantamine on Animal Model Memory and Behavior Using 18F-FDG PET/MRI

  • Roxana Iacob,
  • Matei Palimariciuc,
  • Tudor Florea,
  • Cosmin Vasilica Pricope,
  • Cristina Mariana Uritu,
  • Bogdan Ionel Tamba,
  • Teodor Marian Ionescu,
  • Cati Raluca Stolniceanu,
  • Wael Jalloul and
  • Cipriana Stefanescu
  • + 5 authors

The memory-enhancing activity of Matricaria chamomilla hydroalcoholic extract (MCE) is already being investigated by behavioral and biochemical assays in scopolamine-induced amnesia rat models, while the effects of scopolamine (Sco) on cerebral gluco...

  • Article
  • Open Access
2 Citations
2,386 Views
17 Pages

In this work, we propose a new technique involving the modification of commercial screen-printed carbon electrodes with electrochemically reduced graphene oxide to serve as the starting point of a future electrochemical biosensor for the detection of...

  • Review
  • Open Access
3 Citations
3,902 Views
18 Pages

Bridging the Gap: Harnessing Plant Bioactive Molecules to Target Gut Microbiome Dysfunctions in Amyotrophic Lateral Sclerosis

  • Mirela Pribac,
  • Anca Motataianu,
  • Sebastian Andone,
  • Elena Mardale and
  • Sebastian Nemeth

The correlation between neurodegenerative diseases and the gut microbiome is increasingly evident, with amyotrophic lateral sclerosis (ALS) being particularly notable for its severity and lack of therapeutic options. The gut microbiota, implicated in...

  • Article
  • Open Access
4 Citations
2,972 Views
19 Pages

Spermatogenesis is a process that continues until the end of an individual’s life, although with reduced activity with advancing age. Inflammation, oxidation, and apoptosis are events considered as predictors of pathogenesis and the development...

  • Article
  • Open Access
1 Citations
3,950 Views
15 Pages

SCN1A—Characterization of the Gene’s Variants in the Polish Cohort of Patients with Dravet Syndrome: One Center Experience

  • Elżbieta Stawicka,
  • Anita Zielińska,
  • Paulina Górka-Skoczylas,
  • Karolina Kanabus,
  • Renata Tataj,
  • Tomasz Mazurczak and
  • Dorota Hoffman-Zacharska

The aim of this study was to characterize the genotype and phenotype heterogeneity of patients with SCN1A gene mutations in the Polish population, fulfilling the criteria for the diagnosis of Dravet syndrome (DRVT). Particularly important was the ana...

  • Article
  • Open Access
3 Citations
2,046 Views
20 Pages

Climate change is dramatically increasing the overall area of saline soils around the world, which is increasing by approximately two million hectares each year. Soil salinity decreases crop yields and, thereby, makes farming less profitable, potenti...

  • Article
  • Open Access
1 Citations
1,927 Views
14 Pages

Acute pancreatitis (AP) is characterized by elevated intracellular Ca2+ concentrations, mitochondrial dysfunction, and oxidative stress in pancreatic acinar cells. Algal oil (AO) has demonstrated antioxidant and anti-inflammatory properties. This stu...

  • Review
  • Open Access
22 Citations
8,026 Views
24 Pages

Modulation of Oxidative Stress and Neuroinflammation by Cannabidiol (CBD): Promising Targets for the Treatment of Alzheimer’s Disease

  • Jordan P. Hickey,
  • Andrila E. Collins,
  • Mackayla L. Nelson,
  • Helen Chen and
  • Bettina E. Kalisch

Alzheimer’s disease (AD) is a progressive neurodegenerative disease and the most common form of dementia globally. Although the direct cause of AD remains under debate, neuroinflammation and oxidative stress are critical components in its patho...

  • Review
  • Open Access
21 Citations
8,690 Views
21 Pages

Exploring Maternal Diet-Epigenetic-Gut Microbiome Crosstalk as an Intervention Strategy to Counter Early Obesity Programming

  • Maria Felicia Faienza,
  • Flavia Urbano,
  • Federico Anaclerio,
  • Luigi Antonio Moscogiuri,
  • Fani Konstantinidou,
  • Liborio Stuppia and
  • Valentina Gatta

Alterations in a mother’s metabolism and endocrine system, due to unbalanced nutrition, may increase the risk of both metabolic and non-metabolic disorders in the offspring’s childhood and adulthood. The risk of obesity in the offspring c...

  • Article
  • Open Access
11 Citations
6,325 Views
21 Pages

Effect of the 35 nm and 70 nm Size Exclusion Chromatography (SEC) Column and Plasma Storage Time on Separated Extracellular Vesicles

  • Bernadett György,
  • Krisztina Pálóczi,
  • Mirjam Balbisi,
  • Lilla Turiák,
  • László Drahos,
  • Tamás Visnovitz,
  • Erika Koltai and
  • Zsolt Radák

The technical difficulty of separating extracellular vesicles (EVs) from plasma proteins in human blood presents a significant hurdle in EV research, particularly during nano ultra-high-performance liquid chromatography–tandem mass spectrometri...

  • Article
  • Open Access
6 Citations
2,713 Views
13 Pages

Astrocytes in the brain contribute to various essential functions, including maintenance of the neuronal framework, survival, communication, metabolic processes, and neurotransmitter levels. Leucine-rich repeat kinase 2 (LRRK2) is associated with the...

  • Article
  • Open Access
2 Citations
1,999 Views
15 Pages

Assessing Chitinases and Neurofilament Light Chain as Biomarkers for Adult-Onset Leukodystrophies

  • Paulo de Lima Serrano,
  • Thaiane de Paulo Varollo Rodrigues,
  • Leslyê Donato Pinto,
  • Indiara Correia Pereira,
  • Igor Braga Farias,
  • Renan Brandão Rambaldi Cavalheiro,
  • Patrícia Marques Mendes,
  • Kaliny Oliveira Peixoto,
  • João Paulo Barile and
  • Paulo Sgobbi
  • + 4 authors

Leukodystrophies represent a large and complex group of inherited disorders affecting the white matter of the central nervous system. Adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ALSP) is a rare leukodystrophy which still...

  • Review
  • Open Access
10 Citations
3,582 Views
23 Pages

Insights into the Activation of Unfolded Protein Response Mechanism during Coronavirus Infection

  • Panagiotis Keramidas,
  • Maria Pitou,
  • Eleni Papachristou and
  • Theodora Choli-Papadopoulou

Coronaviruses represent a significant class of viruses that affect both animals and humans. Their replication cycle is strongly associated with the endoplasmic reticulum (ER), which, upon virus invasion, triggers ER stress responses. The activation o...

  • Review
  • Open Access
6 Citations
3,887 Views
15 Pages

The Role of Galectins in Asthma Pathophysiology: A Comprehensive Review

  • Andrea Portacci,
  • Ilaria Iorillo,
  • Leonardo Maselli,
  • Monica Amendolara,
  • Vitaliano Nicola Quaranta,
  • Silvano Dragonieri and
  • Giovanna Elisiana Carpagnano

Galectins are a group of β-galactoside-binding proteins with several roles in immune response, cellular adhesion, and inflammation development. Current evidence suggest that these proteins could play a crucial role in many respiratory diseases s...

  • Article
  • Open Access
2 Citations
2,429 Views
20 Pages

Hepatocellular carcinoma (HCC) is a heterogeneous malignancy with complex carcinogenesis. Although there has been significant progress in the treatment of HCC over the past decades, drug resistance to chemotherapy remains a major obstacle in its succ...

  • Review
  • Open Access
13 Citations
9,502 Views
17 Pages

Salivary Diagnosis of Dental Caries: A Systematic Review

  • Rita Antonelli,
  • Valentina Massei,
  • Elena Ferrari,
  • Mariana Gallo,
  • Thelma A. Pertinhez,
  • Paolo Vescovi,
  • Silvia Pizzi and
  • Marco Meleti

The activity of dental caries, combined with its multifactorial etiology, alters salivary molecule composition. The present systematic review was developed to answer the following question: “Are salivary biomarkers reliable for diagnosis of den...

  • Review
  • Open Access
24 Citations
6,476 Views
31 Pages

A Review of Bioactive Compound Effects from Primary Legume Protein Sources in Human and Animal Health

  • Zachary Shea,
  • Matheus Ogando do Granja,
  • Elizabeth B. Fletcher,
  • Yaojie Zheng,
  • Patrick Bewick,
  • Zhibo Wang,
  • William M. Singer and
  • Bo Zhang

The global demand for sustainable and nutritious food sources has catalyzed interest in legumes, known for their rich repertoire of health-promoting compounds. This review delves into the diverse array of bioactive peptides, protein subunits, isoflav...

  • Review
  • Open Access
70 Citations
15,682 Views
17 Pages

As environmental plastic waste degrades, it creates an abundance of diverse microplastic particles. Consequently, microplastics contaminate drinking water and many staple food products, meaning the oral ingestion of microplastics is an important expo...

  • Review
  • Open Access
32 Citations
26,444 Views
39 Pages

Recent years have witnessed unprecedented progress in therapeutic gene editing, revolutionizing the approach to treating genetic disorders. In this comprehensive review, we discuss the progression of milestones leading to the emergence of the cluster...

  • Article
  • Open Access
5 Citations
2,913 Views
14 Pages

Colorectal Cancer Detection via Metabolites and Machine Learning

  • Rachel Yang,
  • Igor F. Tsigelny,
  • Santosh Kesari and
  • Valentina L. Kouznetsova

Today, colorectal cancer (CRC) diagnosis is performed using colonoscopy, which is the current, most effective screening method. However, colonoscopy poses risks of harm to the patient and is an invasive process. Recent research has proven metabolomic...

  • Article
  • Open Access
1 Citations
2,388 Views
14 Pages

8-oxoguanine (oxoG) is formed in DNA by the action of reactive oxygen species. As a highly mutagenic and the most common oxidative DNA lesion, it is an important marker of oxidative stress. Human 8-oxoguanine-DNA glycosylase (OGG1) is responsible for...

  • Article
  • Open Access
1 Citations
1,944 Views
13 Pages

Exome Sequencing for the Diagnostics of Osteogenesis Imperfecta in Six Russian Patients

  • Yulia S. Koshevaya,
  • Mariia E. Turkunova,
  • Anastasia O. Vechkasova,
  • Elena A. Serebryakova,
  • Maxim Yu. Donnikov,
  • Svyatoslav I. Papanov,
  • Alexander N. Chernov,
  • Lev N. Kolbasin,
  • Lyudmila V. Kovalenko and
  • Oleg S. Glotov
  • + 1 author

Osteogenesis imperfecta (OI) is a group of inherited disorders of connective tissue that cause significant deformities and fragility in bones. Most cases of OI are associated with pathogenic variants in collagen type I genes and are characterized by...

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Curr. Issues Mol. Biol. - ISSN 1467-3045