Recirculating aquaculture systems (RAS) are promising candidates for the sustainable development of the aquaculture industry. A current limitation of RAS is the production and potential accumulation of nitrogenous wastes, ammonium (NH
4+), nitrite (NO
2−) and nitrate (NO
3−), which could affect fish health and welfare. In a previous experiment, we have demonstrated that the marine anammox bacteria
Candidatus Scalindua was a promising candidate to treat the wastewater (WW) of marine, cold-water RAS. However, the activity of the bacteria was negatively impacted after a direct exposure to RAS WW. In the current study, we have further investigated the potential of
Ca. Scalindua to treat marine RAS WW in a three-phase experiment. In the first phase (control, 83 days),
Ca. Scalindua was fed a synthetic feed, enriched in NH
4+, NO
2− and trace element (TE) mix. Removal rates of 98.9% and 99.6% for NH
4+ and NO
2−, respectively, were achieved. In the second phase (116 days), we gradually increased the exposure of
Ca. Scalindua to nitrogen-enriched RAS WW over a period of about 80 days. In the last phase (79 days), we investigated the needs of TE supplementation for the
Ca. Scalindua after they were fully acclimated to 100% RAS WW. Our results show that the gradual exposure of
Ca. Scalindua resulted in a successful acclimation to 100% RAS WW, with maintained high removal rates of both NH
4+ and NO
2− throughout the experiment. Despite a slight decrease in relative abundance (from 21.4% to 16.7%),
Ca. Scalindua remained the dominant species in the granules throughout the whole experiment. We conclude that
Ca. Scalindua can be successfully used to treat marine RAS WW, without the addition of TE, once given enough time to acclimate to its new substrate. Future studies need to determine the specific needs for optimal RAS WW treatment by
Ca. Scalindua at pilot scale.
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